iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UDP/UBQ/UBQ_Other	34.00	2.00e-09	61.20	IUUC-Mmu-063758

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MFPMRVIVET VRSQHCLTCS NEGHMITDTY AIVAGTTTLN QLVETVLAAL GHSSMSTSAR 60
GLIQVNNWKP LPFDQITENL DDTVENLFKD ISSHVVLKIL SKPSTDSNSV QCISEVKNKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAGATATGT TCCCAATGAG GGTAATCGTG GAAACAGTTC GCTCTCAACA TTGCTTGACA 60
TGCTCAAACG AAGGACACAT GATCACAGAC ACTTATGCAA TTGTCGCAGG GACCACTACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0371--Homeobox
KW-0539--Nucleus
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR009057--Homeobox-like
IPR001356--Homeobox_dom
IPR032392--ULD

PROSITE

PS50071--HOMEOBOX_2

Pfam

PF00046--Homeobox
PF16534--ULD

SMART

SM00389--HOX

Gene Ontology

GO:0044798--C:nuclear transcription factor complex
GO:0005634--C:nucleus
GO:0051087--F:chaperone binding
GO:0043565--F:sequence-specific DNA binding
GO:0009792--P:embryo development ending in birth or egg hatching
GO:0034514--P:mitochondrial unfolded protein response
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

KEGG

cel:CELE_ZK1193.5

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001269	Ailuropoda melanoleuca	34.00	9.00e-11	60.80
IUUC-Apl-003442	Anas platyrhynchos	39.44	6.00e-10	58.20
IUUC-Aca-004787	Anolis carolinensis	39.44	2.00e-09	56.20
IUUC-Ame-010811	Astyanax mexicanus	24.91	5.00e-10	58.90
IUUC-Bta-012461	Bos taurus	34.00	8.00e-11	61.20
IUUC-Bdi-014316	Brachypodium distachyon	69.23	1.60e+00	25.80
IUUC-Bra-017664	Brassica rapa	30.30	1.40e-01	29.30
IUUC-Cja-019389	Callithrix jacchus	39.44	9.00e-10	57.80
IUUC-Cfa-020082	Canis familiaris	34.00	1.00e-10	60.10
IUUC-Cpo-021601	Cavia porcellus	34.00	8.00e-11	61.20
IUUC-Csa-023306	Chlorocebus sabaeus	34.00	7.00e-11	60.80
IUUC-Cho-025063	Choloepus hoffmanni	34.00	8.00e-11	61.20
IUUC-Dre-028396	Danio rerio	36.00	3.00e-10	59.30
IUUC-Dno-029755	Dasypus novemcinctus	33.00	4.00e-10	58.90
IUUC-Dor-030766	Dipodomys ordii	34.00	8.00e-11	60.80
IUUC-Ete-032494	Echinops telfairi	36.63	8.00e-10	57.80
IUUC-Eca-033394	Equus caballus	34.00	9.00e-11	60.80
IUUC-Eeu-034706	Erinaceus europaeus	34.00	8.00e-11	61.20
IUUC-Fca-035798	Felis catus	39.44	9.00e-10	57.80
IUUC-Fal-037384	Ficedula albicollis	39.44	6.00e-10	58.50
IUUC-Gmo-038956	Gadus morhua	43.59	5.00e-05	41.60
IUUC-Gga-040653	Gallus gallus	39.44	6.00e-10	58.20
IUUC-Gac-041928	Gasterosteus aculeatus	41.03	9.00e-05	40.80
IUUC-Ggo-045271	Gorilla gorilla	39.44	9.00e-10	57.80
IUUC-Hsa-046800	Homo sapiens	34.00	1.00e-10	60.80
IUUC-Lch-050515	Latimeria chalumnae	32.00	2.00e-09	57.00
IUUC-Loc-052600	Lepisosteus oculatus	36.00	3.00e-10	59.70
IUUC-Laf-054011	Loxodonta africana	34.00	1.00e-10	60.80
IUUC-Mcc-054634	Macaca mulatta	39.44	9.00e-10	57.80
IUUC-Meu-056505	Macropus eugenii	36.63	5.00e-10	57.80
IUUC-Mga-059444	Meleagris gallopavo	39.44	6.00e-10	58.20
IUUC-Mmr-061285	Microcebus murinus	34.00	1.00e-10	60.80
IUUC-Mdo-062444	Monodelphis domestica	34.00	9.00e-11	61.20
IUUC-Mmu-063758	Mus musculus	34.00	9.00e-11	61.20
IUUC-Mpu-066758	Mustela putorius furo	34.00	1.00e-10	60.80
IUUC-Mlu-066936	Myotis lucifugus	39.44	9.00e-10	57.80
IUUC-Nle-069511	Nomascus leucogenys	34.00	1.00e-10	60.80
IUUC-Opr-070880	Ochotona princeps	34.00	1.00e-10	60.80
IUUC-Ont-072450	Oreochromis niloticus	25.00	1.00e-09	57.80
IUUC-Oan-073212	Ornithorhynchus anatinus	39.44	1.00e-10	58.20
IUUC-Ocu-074585	Oryctolagus cuniculus	34.00	9.00e-11	60.80
IUUC-Ola-087080	Oryzias latipes	38.03	1.00e-09	57.80
IUUC-Oga-089020	Otolemur garnettii	34.00	1.00e-10	60.80
IUUC-Oar-089530	Ovis aries	39.44	9.00e-10	57.80
IUUC-Ptr-090639	Pan troglodytes	34.00	9.00e-11	60.80
IUUC-Pan-092418	Papio anubis	34.00	1.00e-10	60.80
IUUC-Psi-093141	Pelodiscus sinensis	34.00	7.00e-11	60.80
IUUC-Pfo-096325	Poecilia formosa	38.03	1.00e-09	57.40
IUUC-Pab-098180	Pongo abelii	34.00	9.00e-11	60.80
IUUC-Pop-099443	Populus trichocarpa	33.33	2.60e-01	26.60
IUUC-Pca-100487	Procavia capensis	34.00	9.00e-11	61.20
IUUC-Pva-102302	Pteropus vampyrus	34.00	1.00e-10	60.80
IUUC-Rno-105734	Rattus norvegicus	34.00	9.00e-11	60.80
IUUC-Sha-106963	Sarcophilus harrisii	34.00	9.00e-11	61.20
IUUC-Spo-108363	Schizosaccharomyces pombe	28.12	2.00e+00	26.60
IUUC-Sly-111297	Solanum lycopersicum	32.39	1.10e-02	32.30
IUUC-Stu-112496	Solanum tuberosum	38.10	4.60e-02	30.00
IUUC-Sar-113384	Sorex araneus	34.00	7.00e-11	60.80
IUUC-Sre-114893	Sporisorium reilianum	36.00	3.40e+00	25.80
IUUC-Ssc-115971	Sus scrofa	32.35	2.00e-09	56.60
IUUC-Tgu-117121	Taeniopygia guttata	39.44	6.00e-10	58.20
IUUC-Tru-118767	Takifugu rubripes	24.85	5.00e-10	58.50
IUUC-Tni-120223	Tetraodon nigroviridis	38.03	9.00e-10	57.80
IUUC-Tbe-127455	Tupaia belangeri	34.00	9.00e-11	61.20
IUUC-Ttr-128230	Tursiops truncatus	34.00	9.00e-11	61.20
IUUC-Vpa-130676	Vicugna pacos	34.00	1.00e-10	60.80
IUUC-Xtr-132122	Xenopus tropicalis	34.00	3.00e-10	59.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence