iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s25600	POPTR_0002s25600.1	POPTR_0002s25600.1
POPTR_0002s25600	POPTR_0002s25600.2	POPTR_0002s25600.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-09	36.7	155	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf....sdtllvsGsdDgtikvWDlrtgvll 36
           ++f    +  +l+sGs D  +++WD  t  ++
   Q: 155  VRFhplhP-EILASGSLDYEVRLWDANTSECI 185
           44554544.89**************8877775 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNLNCATKEM TGLSFPLDRN PLDSPASTNP LQSGRNAFCL LVQREICPRT KHTPKRRWGE 60
DAHWNSNSSS SPKTEQARDA KRGLISWVEA ESLRHLSAKY CPLVPPPRST IAAAFSPDGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCTCCTAGC TCATCAGCTC CTCTTCCTCT CTTTCCTTTA CTAGGTTTTC TCGCCATTTC 60
AAATCCAAAA TCCAACACGC GTACCCCTCT CGCTCCCCCT CTCTTATACA TCGACGAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043231--C:intracellular membrane-bounded organelle
GO:0006914--P:autophagy

KEGG

pop:POPTR_0002s25600g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001917	Ailuropoda melanoleuca	40.32	2.00e-29	124.00
IUUC-Apl-004186	Anas platyrhynchos	40.86	6.00e-31	129.00
IUUC-Aca-004419	Anolis carolinensis	40.86	6.00e-31	129.00
IUUC-Ame-011354	Astyanax mexicanus	41.42	6.00e-28	119.00
IUUC-Bta-012455	Bos taurus	40.66	4.00e-29	123.00
IUUC-Cja-019073	Callithrix jacchus	40.32	9.00e-30	124.00
IUUC-Cfa-020994	Canis familiaris	40.32	2.00e-29	124.00
IUUC-Cpo-022101	Cavia porcellus	40.32	1.00e-29	125.00
IUUC-Csa-023273	Chlorocebus sabaeus	40.32	1.00e-29	125.00
IUUC-Cin-025567	Ciona intestinalis	37.93	9.00e-22	98.20
IUUC-Csv-026005	Ciona savignyi	35.03	5.00e-23	100.00
IUUC-Dre-028120	Danio rerio	38.33	7.00e-29	122.00
IUUC-Dno-029948	Dasypus novemcinctus	40.66	2.00e-29	124.00
IUUC-Dor-030568	Dipodomys ordii	40.32	1.00e-29	125.00
IUUC-Ete-032864	Echinops telfairi	40.32	2.00e-29	124.00
IUUC-Eca-034392	Equus caballus	40.32	2.00e-29	124.00
IUUC-Eeu-034440	Erinaceus europaeus	40.32	2.00e-29	124.00
IUUC-Fca-035359	Felis catus	40.32	2.00e-29	124.00
IUUC-Fal-037483	Ficedula albicollis	40.86	6.00e-31	129.00
IUUC-Gmo-039343	Gadus morhua	44.16	3.00e-28	120.00
IUUC-Gga-040787	Gallus gallus	40.86	9.00e-31	128.00
IUUC-Gac-041321	Gasterosteus aculeatus	43.04	1.00e-27	119.00
IUUC-Ggo-044775	Gorilla gorilla	40.32	2.00e-29	124.00
IUUC-Hsa-045708	Homo sapiens	40.32	1.00e-29	125.00
IUUC-Itr-048376	Ictidomys tridecemlineatus	40.32	7.00e-30	125.00
IUUC-Loc-052881	Lepisosteus oculatus	42.41	2.00e-27	117.00
IUUC-Laf-053342	Loxodonta africana	40.32	4.00e-30	125.00
IUUC-Mcc-055848	Macaca mulatta	40.32	1.00e-29	125.00
IUUC-Meu-056320	Macropus eugenii	40.86	7.00e-31	129.00
IUUC-Mga-059401	Meleagris gallopavo	40.86	8.00e-31	129.00
IUUC-Mmr-061037	Microcebus murinus	41.18	4.00e-24	106.00
IUUC-Mdo-062484	Monodelphis domestica	40.11	3.00e-31	130.00
IUUC-Mmu-064090	Mus musculus	40.32	1.00e-29	125.00
IUUC-Mac-065675	Musa acuminata	58.94	0.00e+00	790.00
IUUC-Mpu-066165	Mustela putorius furo	40.32	2.00e-29	124.00
IUUC-Mlu-068038	Myotis lucifugus	40.32	2.00e-29	124.00
IUUC-Nle-069361	Nomascus leucogenys	40.32	2.00e-29	124.00
IUUC-Opr-070360	Ochotona princeps	39.78	1.00e-28	122.00
IUUC-Ont-071277	Oreochromis niloticus	39.69	6.00e-28	119.00
IUUC-Oan-073623	Ornithorhynchus anatinus	43.05	2.00e-29	124.00
IUUC-Ocu-074600	Oryctolagus cuniculus	40.32	1.00e-29	125.00
IUUC-Ola-086729	Oryzias latipes	43.51	6.00e-28	119.00
IUUC-Olu-087735	Ostreococcus lucimarinus	46.80	4.00e-55	208.00
IUUC-Oga-089113	Otolemur garnettii	36.70	3.00e-27	117.00
IUUC-Oar-090171	Ovis aries	40.66	3.00e-29	124.00
IUUC-Ptr-090970	Pan troglodytes	40.32	1.00e-29	125.00
IUUC-Pan-092778	Papio anubis	40.32	1.00e-29	125.00
IUUC-Psi-093571	Pelodiscus sinensis	40.86	4.00e-31	130.00
IUUC-Pma-094563	Petromyzon marinus	43.67	3.00e-27	114.00
IUUC-Ppa-095832	Physcomitrella patens	69.29	2.00e-96	346.00
IUUC-Pfo-097365	Poecilia formosa	44.03	3.00e-27	117.00
IUUC-Pab-098647	Pongo abelii	40.32	1.00e-29	125.00
IUUC-Pca-101035	Procavia capensis	40.32	5.00e-30	126.00
IUUC-Pva-103187	Pteropus vampyrus	35.75	6.00e-28	119.00
IUUC-Rno-105701	Rattus norvegicus	38.71	2.00e-27	118.00
IUUC-Sha-107612	Sarcophilus harrisii	40.86	7.00e-31	129.00
IUUC-Smo-108871	Selaginella moellendorffii	67.49	6.00e-93	334.00
IUUC-Sar-113242	Sorex araneus	40.76	9.00e-30	125.00
IUUC-Ssc-116094	Sus scrofa	40.66	2.00e-29	124.00
IUUC-Tru-118308	Takifugu rubripes	39.69	4.00e-28	120.00
IUUC-Tsy-119552	Tarsius syrichta	41.73	2.00e-24	107.00
IUUC-Tae-124768	Triticum aestivum	70.45	5.00e-106	377.00
IUUC-Tbe-127902	Tupaia belangeri	38.71	2.00e-28	121.00
IUUC-Ttr-129278	Tursiops truncatus	36.20	2.00e-29	124.00
IUUC-Vpa-130741	Vicugna pacos	35.91	7.00e-26	112.00
IUUC-Xtr-132247	Xenopus tropicalis	42.94	1.00e-29	125.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence