iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000018180.1	ENSSHAT00000021626.1	ENSSHAP00000021453.1
ENSSHAG00000018180.1	ENSSHAT00000021627.1	ENSSHAP00000021454.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-21	74.6	82	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl.af.......sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt ++t++ af       +   l++++s D t+ +WD +tg++++
   Q: 82   GHTQKITAItAFpsldsceDKnQLILTASADRTVIIWDCDTGRQVQ 127
           8*******9459**9998622488*******************987 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

CIYLLIGKNA FFKGGSKKSP VQTINEEQTQ NPYTELLVLK AHHDIVRFLV QLDDYRFASA 60
GDDGIVFLWN AQTGEKIFEF HGHTQKITAI TAFPSLDSCE DKNQLILTAS ADRTVIIWDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATGATTCA TTTCTTCACA GTGTCAAAAG AGAATTTGTC AACTCTTATT TTTAGGAGTA 60
GAGAAGAAAA TGTTTTTACA TTGTTTTGAT TTTTGGTCAT TTCATTACTT CATCAGTACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032045--C:guanyl-nucleotide exchange factor complex
GO:0005765--C:lysosomal membrane
GO:0017112--F:Rab guanyl-nucleotide exchange factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	83.48	0.00e+00	778.00
IUUC-Apl-004087	Anas platyrhynchos	76.65	0.00e+00	654.00
IUUC-Aca-005359	Anolis carolinensis	73.13	0.00e+00	682.00
IUUC-Ame-010669	Astyanax mexicanus	39.51	1.00e-72	266.00
IUUC-Bta-013534	Bos taurus	79.91	0.00e+00	764.00
IUUC-Cja-019219	Callithrix jacchus	83.74	0.00e+00	776.00
IUUC-Cfa-020310	Canis familiaris	83.94	0.00e+00	784.00
IUUC-Cpo-021664	Cavia porcellus	81.15	0.00e+00	776.00
IUUC-Csa-024228	Chlorocebus sabaeus	85.02	0.00e+00	812.00
IUUC-Cho-024898	Choloepus hoffmanni	77.17	2.00e-101	362.00
IUUC-Dre-028538	Danio rerio	52.31	2.00e-122	432.00
IUUC-Dno-028861	Dasypus novemcinctus	83.83	0.00e+00	781.00
IUUC-Dor-030111	Dipodomys ordii	81.28	0.00e+00	782.00
IUUC-Ete-032444	Echinops telfairi	84.38	1.00e-157	548.00
IUUC-Eca-033676	Equus caballus	81.90	0.00e+00	772.00
IUUC-Eeu-034571	Erinaceus europaeus	73.17	0.00e+00	675.00
IUUC-Fca-035387	Felis catus	84.39	0.00e+00	785.00
IUUC-Fal-037310	Ficedula albicollis	75.45	0.00e+00	696.00
IUUC-Gmo-039224	Gadus morhua	51.84	8.00e-128	449.00
IUUC-Gga-040957	Gallus gallus	76.30	0.00e+00	708.00
IUUC-Gac-042385	Gasterosteus aculeatus	53.30	7.00e-138	483.00
IUUC-Ggo-044973	Gorilla gorilla	86.65	0.00e+00	807.00
IUUC-Hsa-046842	Homo sapiens	84.58	0.00e+00	809.00
IUUC-Itr-048784	Ictidomys tridecemlineatus	86.60	6.00e-168	582.00
IUUC-Lch-049625	Latimeria chalumnae	61.23	1.00e-165	575.00
IUUC-Loc-052368	Lepisosteus oculatus	56.61	7.00e-149	520.00
IUUC-Laf-053678	Loxodonta africana	82.74	0.00e+00	778.00
IUUC-Mcc-055184	Macaca mulatta	86.65	0.00e+00	809.00
IUUC-Meu-056165	Macropus eugenii	86.43	0.00e+00	778.00
IUUC-Mga-060184	Meleagris gallopavo	77.85	3.00e-68	250.00
IUUC-Mmr-060965	Microcebus murinus	84.14	0.00e+00	796.00
IUUC-Mdo-062702	Monodelphis domestica	90.77	0.00e+00	856.00
IUUC-Mmu-063649	Mus musculus	73.73	5.00e-106	377.00
IUUC-Mpu-065747	Mustela putorius furo	81.02	0.00e+00	770.00
IUUC-Mlu-067873	Myotis lucifugus	84.16	0.00e+00	779.00
IUUC-Nle-069670	Nomascus leucogenys	84.80	0.00e+00	804.00
IUUC-Opr-070266	Ochotona princeps	73.01	0.00e+00	687.00
IUUC-Ont-071242	Oreochromis niloticus	52.76	1.00e-134	473.00
IUUC-Oan-072879	Ornithorhynchus anatinus	86.46	0.00e+00	810.00
IUUC-Ocu-074872	Oryctolagus cuniculus	63.17	2.00e-155	541.00
IUUC-Ola-087211	Oryzias latipes	46.89	1.00e-108	386.00
IUUC-Oga-088852	Otolemur garnettii	81.06	0.00e+00	786.00
IUUC-Oar-089812	Ovis aries	79.91	0.00e+00	760.00
IUUC-Ptr-091067	Pan troglodytes	85.24	0.00e+00	812.00
IUUC-Pan-091778	Papio anubis	84.84	0.00e+00	808.00
IUUC-Psi-093932	Pelodiscus sinensis	79.00	0.00e+00	725.00
IUUC-Pfo-096845	Poecilia formosa	53.41	3.00e-131	461.00
IUUC-Pab-097892	Pongo abelii	84.54	0.00e+00	730.00
IUUC-Pca-100567	Procavia capensis	61.89	3.00e-154	538.00
IUUC-Pva-102560	Pteropus vampyrus	78.85	0.00e+00	744.00
IUUC-Rno-105662	Rattus norvegicus	78.71	0.00e+00	747.00
IUUC-Sar-113643	Sorex araneus	70.98	0.00e+00	634.00
IUUC-Ssc-115791	Sus scrofa	82.93	0.00e+00	782.00
IUUC-Tgu-117145	Taeniopygia guttata	75.72	0.00e+00	681.00
IUUC-Tru-117875	Takifugu rubripes	53.52	1.00e-137	482.00
IUUC-Tsy-119030	Tarsius syrichta	86.26	0.00e+00	672.00
IUUC-Tni-119761	Tetraodon nigroviridis	52.09	2.00e-133	468.00
IUUC-Tbe-127757	Tupaia belangeri	83.21	0.00e+00	699.00
IUUC-Ttr-128762	Tursiops truncatus	83.04	0.00e+00	790.00
IUUC-Vpa-130360	Vicugna pacos	82.82	0.00e+00	787.00
IUUC-Xtr-131954	Xenopus tropicalis	65.17	3.00e-169	587.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence