iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000013472.8	ENSDART00000141056.2	ENSDARP00000117911.1
ENSDARG00000013472.8	ENSDART00000027740.6	ENSDARP00000016280.6

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-20	73.3	88	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 13   d.tllvsGsdDgtikvWDlrtgvll 36
           +  +lvsG+ D+t+ +WDl+t +l 
   Q: 88   TsQFLVSGGLDNTVNIWDLKTKRLH 112
           4478***************998765 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MEDVTRLVSS GDCLKIWDSS SMTVVEQFNP HSATHPVAQV CWSSSNQYVV SASSIGDKLV 60
VSSLKSSPVP VMELGEGKKQ TRVSLNSTSQ FLVSGGLDNT VNIWDLKTKR LHRTLKDHKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGAGCCCAG CGGCGTGCCG TAGTGGCGGT TCCTCACCGG AGCCACGGAT GTTCAAACTT 60
TATCGATATG ACAAAGTTTT AGTTTTAAAT AAAAGGGCAC ATTTATTTAA CCACAGTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0005813--C:centrosome
GO:0036064--C:ciliary basal body
GO:0005737--C:cytoplasm
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole
GO:0071539--P:protein localization to centrosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	36.36	2.00e-14	75.10
IUUC-Aml-002397	Ailuropoda melanoleuca	43.02	1.00e-147	516.00
IUUC-Atr-002464	Amborella trichopoda	32.14	7.00e-34	139.00
IUUC-Apl-003870	Anas platyrhynchos	44.02	1.00e-149	523.00
IUUC-Aca-004925	Anolis carolinensis	40.48	6.00e-130	458.00
IUUC-Aly-005931	Arabidopsis lyrata	30.29	2.00e-32	134.00
IUUC-Ath-006681	Arabidopsis thaliana	30.94	2.00e-33	137.00
IUUC-Ame-010906	Astyanax mexicanus	75.94	0.00e+00	965.00
IUUC-Bta-013389	Bos taurus	44.94	6.00e-152	531.00
IUUC-Bdi-014340	Brachypodium distachyon	31.42	9.00e-35	142.00
IUUC-Bol-015773	Brassica oleracea	31.17	6.00e-34	139.00
IUUC-Bra-016623	Brassica rapa	30.52	4.00e-33	137.00
IUUC-Cja-019541	Callithrix jacchus	44.17	2.00e-155	542.00
IUUC-Cfa-021218	Canis familiaris	43.37	4.00e-149	522.00
IUUC-Cpo-021697	Cavia porcellus	41.91	9.00e-142	497.00
IUUC-Csa-023620	Chlorocebus sabaeus	43.95	1.00e-153	536.00
IUUC-Cho-025105	Choloepus hoffmanni	39.93	2.00e-102	367.00
IUUC-Cin-025293	Ciona intestinalis	38.67	9.00e-54	205.00
IUUC-Csv-026234	Ciona savignyi	33.84	4.00e-44	171.00
IUUC-Dno-029281	Dasypus novemcinctus	47.35	1.00e-116	413.00
IUUC-Dor-031020	Dipodomys ordii	65.56	3.00e-58	220.00
IUUC-Ete-033113	Echinops telfairi	51.32	8.00e-97	347.00
IUUC-Eca-034230	Equus caballus	43.92	2.00e-149	523.00
IUUC-Eeu-034671	Erinaceus europaeus	62.85	5.00e-92	332.00
IUUC-Fca-035775	Felis catus	44.60	7.00e-155	540.00
IUUC-Fal-037557	Ficedula albicollis	42.42	6.00e-136	478.00
IUUC-Gmo-038586	Gadus morhua	74.42	7.00e-131	461.00
IUUC-Gga-040153	Gallus gallus	43.99	9.00e-150	524.00
IUUC-Gac-041385	Gasterosteus aculeatus	54.95	0.00e+00	628.00
IUUC-Gma-042844	Glycine max	32.06	5.00e-38	153.00
IUUC-Ggo-044576	Gorilla gorilla	43.82	1.00e-155	543.00
IUUC-Hsa-046198	Homo sapiens	44.06	4.00e-156	545.00
IUUC-Hvu-047794	Hordeum vulgare	32.82	2.00e-15	74.70
IUUC-Lch-050561	Latimeria chalumnae	38.76	1.00e-99	357.00
IUUC-Lpe-051469	Leersia perrieri	29.90	9.00e-35	142.00
IUUC-Loc-052816	Lepisosteus oculatus	55.10	3.00e-175	608.00
IUUC-Laf-053880	Loxodonta africana	48.93	3.00e-107	382.00
IUUC-Mcc-054977	Macaca mulatta	44.20	2.00e-154	539.00
IUUC-Meu-056141	Macropus eugenii	57.67	3.00e-100	359.00
IUUC-Mtr-058441	Medicago truncatula	33.33	3.00e-37	150.00
IUUC-Mga-060141	Meleagris gallopavo	43.81	8.00e-147	514.00
IUUC-Mmr-061201	Microcebus murinus	44.44	1.00e-152	533.00
IUUC-Mdo-061855	Monodelphis domestica	45.89	1.00e-151	530.00
IUUC-Mmu-064342	Mus musculus	44.35	1.00e-154	540.00
IUUC-Mac-065368	Musa acuminata	33.33	6.00e-32	133.00
IUUC-Mpu-066191	Mustela putorius furo	43.43	4.00e-151	528.00
IUUC-Mlu-067310	Myotis lucifugus	43.88	7.00e-151	527.00
IUUC-Nle-069990	Nomascus leucogenys	43.58	5.00e-155	541.00
IUUC-Opr-070336	Ochotona princeps	56.33	3.00e-100	359.00
IUUC-Ont-071675	Oreochromis niloticus	59.57	0.00e+00	698.00
IUUC-Oan-072772	Ornithorhynchus anatinus	43.13	9.00e-119	420.00
IUUC-Ocu-074095	Oryctolagus cuniculus	43.13	8.00e-150	524.00
IUUC-Oba-075327	Oryza barthii	32.13	5.00e-35	143.00
IUUC-Obr-076119	Oryza brachyantha	31.80	7.00e-35	142.00
IUUC-Ogl-077820	Oryza glaberrima	32.46	2.00e-35	144.00
IUUC-Ogu-078679	Oryza glumaepatula	31.80	7.00e-35	142.00
IUUC-Oin-079891	Oryza indica	32.13	4.00e-35	143.00
IUUC-Olo-080414	Oryza longistaminata	34.56	8.00e-32	132.00
IUUC-Ome-081888	Oryza meridionalis	31.80	6.00e-35	142.00
IUUC-Oni-082417	Oryza nivara	32.13	5.00e-35	143.00
IUUC-Opu-083393	Oryza punctata	32.13	4.00e-35	143.00
IUUC-Oru-084698	Oryza rufipogon	32.13	4.00e-35	144.00
IUUC-Osa-086121	Oryza sativa	32.13	5.00e-35	143.00
IUUC-Ola-086806	Oryzias latipes	51.86	2.00e-180	625.00
IUUC-Olu-087591	Ostreococcus lucimarinus	25.90	8.00e-16	78.60
IUUC-Oga-088622	Otolemur garnettii	45.11	1.00e-155	543.00
IUUC-Oar-090391	Ovis aries	64.33	2.00e-117	417.00
IUUC-Ptr-091036	Pan troglodytes	43.78	4.00e-155	541.00
IUUC-Pan-092576	Papio anubis	44.06	3.00e-154	539.00
IUUC-Psi-093450	Pelodiscus sinensis	44.01	5.00e-152	531.00
IUUC-Pma-094101	Petromyzon marinus	50.17	2.00e-90	325.00
IUUC-Ppa-095262	Physcomitrella patens	30.60	2.00e-34	141.00
IUUC-Pfo-097142	Poecilia formosa	57.37	0.00e+00	682.00
IUUC-Pab-097829	Pongo abelii	44.10	1.00e-156	546.00
IUUC-Pop-099687	Populus trichocarpa	31.94	3.00e-36	147.00
IUUC-Pca-100217	Procavia capensis	55.33	4.00e-100	358.00
IUUC-Ppe-101502	Prunus persica	31.82	9.00e-38	152.00
IUUC-Pva-102736	Pteropus vampyrus	44.38	6.00e-154	538.00
IUUC-Rno-104977	Rattus norvegicus	43.77	1.00e-150	526.00
IUUC-Sha-107003	Sarcophilus harrisii	65.33	3.00e-114	405.00
IUUC-Smo-109328	Selaginella moellendorffii	30.47	1.00e-33	138.00
IUUC-Sit-109796	Setaria italica	32.33	5.00e-35	142.00
IUUC-Sly-110941	Solanum lycopersicum	31.41	3.00e-33	137.00
IUUC-Stu-112314	Solanum tuberosum	31.77	2.00e-33	138.00
IUUC-Sar-112926	Sorex araneus	39.89	2.00e-130	460.00
IUUC-Sbi-113822	Sorghum bicolor	34.09	8.00e-23	102.00
IUUC-Ssc-116242	Sus scrofa	64.33	4.00e-118	417.00
IUUC-Tgu-116765	Taeniopygia guttata	43.55	4.00e-141	495.00
IUUC-Tru-117738	Takifugu rubripes	56.96	0.00e+00	733.00
IUUC-Tsy-118856	Tarsius syrichta	43.43	2.00e-136	479.00
IUUC-Tni-120871	Tetraodon nigroviridis	58.99	0.00e+00	733.00
IUUC-Tca-120965	Theobroma cacao	29.90	8.00e-34	139.00
IUUC-Tae-123957	Triticum aestivum	31.48	2.00e-35	144.00
IUUC-Tur-126840	Triticum urartu	31.48	3.00e-35	144.00
IUUC-Ttr-128551	Tursiops truncatus	43.68	1.00e-141	496.00
IUUC-Vpa-130324	Vicugna pacos	44.21	3.00e-152	532.00
IUUC-Vvi-131699	Vitis vinifera	32.37	4.00e-37	149.00
IUUC-Xtr-131956	Xenopus tropicalis	48.12	6.00e-169	587.00
IUUC-Xma-132982	Xiphophorus maculatus	57.25	0.00e+00	681.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence