iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114037

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G162500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g022390	Sb05g022390.1	Sb05g022390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.30e-71	240.1	201	524

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           +GlkN+g+tCYmNS+LQ+L++ip +r+++ +     ++ ++++ p+g++  +lq+lf +l ++++++v+++el+k++++    +++++q+D+qE+ 
   Q: 201  VGLKNQGATCYMNSLLQTLYHIPYFRKAVYH-----MPTTENDMPSGSIPLALQSLFYKL-QYSDSSVATKELTKSFGWDT--YDSFMQHDVQELN 288
           6******************************.....555556789***************.88999************877..67*********** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLe 192
           ++l ++le+++                          k +  + +i++lF+g+  + i c + + +s+r+e+f+dl+l+v+g +     ++ ++++
   Q: 289  RVLSEKLEDKM--------------------------KGTVVEGTIEQLFEGHHINYIECINVEYKSNRKESFYDLQLDVKGCR-----DIYSSFD 353
           ***********..........................7899*******************************************.....9****** PP
   S: 193  sftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdls....pfctspeekqkekkkYeLiavv 284
           ++++ e+leg+nky+ e+  ++q+a+k + +  +P+vL l+LkRf+++  ++   kin+++efpl+Ldl+    ++++ + +  ++++ Y L++v+
   Q: 354  KYVEVERLEGDNKYHAENH-GLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLDrddgKYLAPDAD-RSTRNLYTLHSVL 447
           *****************96.69************************************************888778877555.556********** PP
   S: 285  vHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetg.......................staYvlfYkr 337
           vHsG++++GHY+a+++   +++W++fdD++Vt+ + ++ lee+                        s+aY+l+Y r
   Q: 448  VHSGGVHGGHYYAFIRPtLSEQWYKFDDERVTKEDAKKALEEQYggeeelpqinpgfnnapfkftkySNAYMLVYIR 524
           ****************944666**************999997779******************************87 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTMVTPPTVE HEDEEMLVPA QEVAAADTDA AQPMEVVAQT EVVSTAESQP VEDPQTSRFT 60
WTIENFTRFN GKKHYSEVFV VGGFKWRVLI FPKGNNVDHF SMYLDVADSA NLPYGWSRYA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTATGG TGACTCCTCC CACTGTCGAG GTACGTAGGC ACTCACGCGT CGTCCACTCC 60
GTCCCGTCCT CGCCGCTTCC CCATCCCCCT TCCCCGCTGC CGTACTCCTC CGTTGCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002083--MATH/TRAF_dom
IPR001394--Peptidase_C19_UCH
IPR008974--TRAF-like
IPR024729--USP7_ICP0-binding_dom
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50144--MATH
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00917--MATH
PF00443--UCH
PF14533--USP7_C2
PF12436--USP7_ICP0_bdg

SMART

SM00061--MATH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_05g022390

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002408	Ailuropoda melanoleuca	36.52	1.00e-162	566.00
IUUC-Apl-003558	Anas platyrhynchos	36.98	2.00e-166	578.00
IUUC-Aca-004518	Anolis carolinensis	38.35	1.00e-155	543.00
IUUC-Ame-010903	Astyanax mexicanus	36.06	3.00e-164	572.00
IUUC-Bta-013192	Bos taurus	36.96	9.00e-164	570.00
IUUC-Bdi-014329	Brachypodium distachyon	90.53	0.00e+00	1979.00
IUUC-Cel-018219	Caenorhabditis elegans	27.61	6.00e-96	345.00
IUUC-Cja-019006	Callithrix jacchus	36.65	2.00e-163	569.00
IUUC-Cfa-020361	Canis familiaris	36.68	3.00e-162	565.00
IUUC-Cpo-022320	Cavia porcellus	36.23	1.00e-162	566.00
IUUC-Csa-024050	Chlorocebus sabaeus	36.68	2.00e-162	565.00
IUUC-Cho-024434	Choloepus hoffmanni	32.43	5.00e-87	315.00
IUUC-Cin-025689	Ciona intestinalis	33.89	2.00e-155	542.00
IUUC-Cne-026968	Cryptococcus neoformans	40.33	0.00e+00	703.00
IUUC-Dre-028510	Danio rerio	36.54	6.00e-164	570.00
IUUC-Dno-029696	Dasypus novemcinctus	36.70	1.00e-162	566.00
IUUC-Dor-030611	Dipodomys ordii	49.41	1.00e-81	297.00
IUUC-Ete-033191	Echinops telfairi	36.10	2.00e-157	548.00
IUUC-Eca-034122	Equus caballus	36.52	2.00e-162	565.00
IUUC-Fca-036377	Felis catus	36.59	2.00e-162	565.00
IUUC-Fal-036964	Ficedula albicollis	37.05	2.00e-167	582.00
IUUC-Fox-037695	Fusarium oxysporum	37.15	7.00e-180	624.00
IUUC-Fso-038084	Fusarium solani	36.42	5.00e-174	604.00
IUUC-Gmo-038644	Gadus morhua	35.87	2.00e-164	572.00
IUUC-Ggr-040029	Gaeumannomyces graminis	35.26	2.00e-166	579.00
IUUC-Gga-040944	Gallus gallus	37.05	1.00e-167	583.00
IUUC-Gac-041740	Gasterosteus aculeatus	35.77	5.00e-165	574.00
IUUC-Ggo-044947	Gorilla gorilla	36.68	1.00e-162	566.00
IUUC-Hsa-046278	Homo sapiens	36.43	7.00e-163	567.00
IUUC-Itr-047904	Ictidomys tridecemlineatus	37.96	4.00e-151	528.00
IUUC-Lch-049847	Latimeria chalumnae	36.28	8.00e-166	577.00
IUUC-Laf-053566	Loxodonta africana	36.61	1.00e-162	566.00
IUUC-Mcc-055549	Macaca mulatta	36.68	4.00e-162	565.00
IUUC-Meu-056887	Macropus eugenii	29.54	6.00e-66	245.00
IUUC-Mor-057149	Magnaporthe oryzae	34.31	5.00e-166	577.00
IUUC-Mpo-057536	Magnaporthe poae	35.52	1.00e-165	576.00
IUUC-Mga-060148	Meleagris gallopavo	37.05	2.00e-167	582.00
IUUC-Mmr-060946	Microcebus murinus	36.68	2.00e-162	566.00
IUUC-Mdo-062079	Monodelphis domestica	37.11	2.00e-146	512.00
IUUC-Mmu-063678	Mus musculus	36.28	5.00e-162	564.00
IUUC-Mpu-066744	Mustela putorius furo	36.68	4.00e-162	564.00
IUUC-Mlu-067949	Myotis lucifugus	36.81	9.00e-161	560.00
IUUC-Nle-070064	Nomascus leucogenys	36.68	2.00e-162	565.00
IUUC-Ont-072095	Oreochromis niloticus	36.08	2.00e-162	565.00
IUUC-Oan-073483	Ornithorhynchus anatinus	36.77	7.00e-161	560.00
IUUC-Ocu-073967	Oryctolagus cuniculus	36.78	2.00e-159	555.00
IUUC-Ola-086640	Oryzias latipes	36.50	3.00e-164	572.00
IUUC-Olu-087874	Ostreococcus lucimarinus	44.69	0.00e+00	894.00
IUUC-Oga-089059	Otolemur garnettii	34.14	6.00e-138	484.00
IUUC-Oar-089710	Ovis aries	36.96	9.00e-164	570.00
IUUC-Ptr-091334	Pan troglodytes	36.68	1.00e-162	566.00
IUUC-Pan-091717	Papio anubis	36.68	2.00e-162	566.00
IUUC-Psi-093933	Pelodiscus sinensis	36.63	2.00e-165	575.00
IUUC-Pma-094648	Petromyzon marinus	37.99	4.00e-156	544.00
IUUC-Pfo-096181	Poecilia formosa	36.08	4.00e-162	564.00
IUUC-Pab-098231	Pongo abelii	35.02	3.00e-147	515.00
IUUC-Pca-100543	Procavia capensis	36.02	7.00e-94	338.00
IUUC-Pva-102472	Pteropus vampyrus	36.96	7.00e-159	553.00
IUUC-Rno-105816	Rattus norvegicus	36.28	3.00e-163	568.00
IUUC-Sha-107439	Sarcophilus harrisii	36.96	2.00e-162	565.00
IUUC-Sar-113685	Sorex araneus	36.35	7.00e-158	550.00
IUUC-Ssc-116297	Sus scrofa	36.68	3.00e-162	565.00
IUUC-Tgu-116767	Taeniopygia guttata	36.74	2.00e-166	579.00
IUUC-Tru-118208	Takifugu rubripes	36.22	1.00e-160	560.00
IUUC-Tni-119890	Tetraodon nigroviridis	36.31	3.00e-161	561.00
IUUC-Tre-122169	Trichoderma reesei	36.54	2.00e-169	589.00
IUUC-Tvi-122600	Trichoderma virens	36.87	1.00e-176	613.00
IUUC-Tae-125264	Triticum aestivum	89.72	0.00e+00	1969.00
IUUC-Tme-127045	Tuber melanosporum	36.22	3.00e-171	595.00
IUUC-Tbe-127696	Tupaia belangeri	43.84	3.00e-69	256.00
IUUC-Ttr-129161	Tursiops truncatus	36.68	9.00e-161	560.00
IUUC-Vda-129708	Verticillium dahliae	35.70	6.00e-173	600.00
IUUC-Xtr-132073	Xenopus tropicalis	36.70	1.00e-162	566.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence