iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098974

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-conjugating enzyme family protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTR_0003s07070g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s07070	POPTR_0003s07070.1	POPTR_0003s07070.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	6.60e-18	65.9	9	121

Active Site

Position(s)	Description	Evidence
78	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilk.eee 90
           Rl+ke+ +l k+p+++++a+p+ + d+ ew+++++G e+tp++gg++  +i+fp+   +  P+ +f+t+          k+Cls+++ ++e
   Q: 9    RLQKEYRALCKEPVSHVVARPSPS-DILEWHYVLEGSEGTPFAGGFYYGKIKFPPY--MITPNGRFMTQ---------KKICLSMIDfHPE 87
           9**********************9.9***************************974..56788888887.........8*******889** PP
   S: 91   kWspalsvesvllsiqsllaepnpesplneeaae 124
            W+p++sv+s+l+++ s++++  p  +  +  a 
   Q: 88   SWNPMWSVSSILTGLLSFMTDNTPTTGSVNTTAA 121
           *******************997777765555443 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAEKSCVKRL QKEYRALCKE PVSHVVARPS PSDILEWHYV LEGSEGTPFA GGFYYGKIKF 60
PPYMITPNGR FMTQKKICLS MIDFHPESWN PMWSVSSILT GLLSFMTDNT PTTGSVNTTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGAGA AATCTTGTGT CAAGCGACTC CAGAAGGAAT ATAGAGCTCT CTGTAAAGTA 60
TACAATCCAT TTTATCCTAT TTTCCAATAT CATCGTAGTG AAATAATAAT GCGGCTAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0000209--P:protein polyubiquitination
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

pop:POPTR_0003s07070g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence