iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nle-069569

Ensembl Protein ID

ENSNLEP00000019325.2

UniProt Accession

G1S1D7; G1S1D7_NOMLE

Genbank Protein ID

ENSNLEP00000019325

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01094093

Gene Name

KDM5D

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000015927.1	ENSNLET00000020300.1	ENSNLEP00000019325.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.80e-11	42.6	326	372

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC +C +g+ed+ +l+ C+ C++++H  Cl ++  +e p+   w CpkC 
   Q: 326  VCRMCSRGDEDD-KLLLCDGCDDNYHIFCLLPP-LPEIPKGV-WRCPKCV 372
           8*********88.6*******************.*******8.******6 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MEPGSDDFLP PPECPVFEPS WAEFRDPLGY IAKIRPIAEK SGICKIRPPA DWQPPFAVEV 60
DNFRFTPRIQ RLNELEAQTR VKLNYLDQIA KFWEIQGSSL KIPNVERRIL DLYSLSKIVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACCAAGAT GGCGGCGGCG GCGCTAAAGG CCGCGGCGTT TGGGAGGTAA CTGTGGTGGC 60
GAAGGCTGCG GTAGTGGGGA GGCAACCACA CAGTTTGGAA GAAACGGAGC GGGACGAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0003677--F:DNA binding
GO:0032453--F:histone demethylase activity (H3-K4 specific)
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001327	Ailuropoda melanoleuca	98.40	0.00e+00	2510.00
IUUC-Aca-004712	Anolis carolinensis	81.20	0.00e+00	1952.00
IUUC-Afl-008625	Aspergillus flavus	29.41	5.00e-140	492.00
IUUC-Afu-008796	Aspergillus fumigatus	31.52	3.00e-115	410.00
IUUC-Aor-010155	Aspergillus oryzae	29.41	7.00e-140	492.00
IUUC-Bta-013099	Bos taurus	98.75	0.00e+00	2526.00
IUUC-Bci-013992	Botrytis cinerea	30.51	1.00e-107	385.00
IUUC-Cja-018723	Callithrix jacchus	97.23	0.00e+00	2513.00
IUUC-Cfa-020954	Canis familiaris	98.75	0.00e+00	2497.00
IUUC-Cpo-021718	Cavia porcellus	97.82	0.00e+00	1368.00
IUUC-Csa-023946	Chlorocebus sabaeus	99.34	0.00e+00	2566.00
IUUC-Dre-028238	Danio rerio	66.30	0.00e+00	1825.00
IUUC-Dno-029435	Dasypus novemcinctus	98.46	0.00e+00	2483.00
IUUC-Dor-030226	Dipodomys ordii	90.68	0.00e+00	1803.00
IUUC-Dse-031479	Dothistroma septosporum	29.85	5.00e-119	423.00
IUUC-Eca-033834	Equus caballus	98.62	0.00e+00	2561.00
IUUC-Eeu-034692	Erinaceus europaeus	97.34	0.00e+00	1883.00
IUUC-Fca-035766	Felis catus	95.61	0.00e+00	2421.00
IUUC-Fox-037694	Fusarium oxysporum	32.28	4.00e-100	360.00
IUUC-Fso-038127	Fusarium solani	30.67	1.00e-115	412.00
IUUC-Gmo-039140	Gadus morhua	70.79	0.00e+00	1680.00
IUUC-Gac-041825	Gasterosteus aculeatus	67.27	0.00e+00	1769.00
IUUC-Ggo-045492	Gorilla gorilla	99.64	0.00e+00	2591.00
IUUC-Hsa-046737	Homo sapiens	99.56	0.00e+00	2573.00
IUUC-Itr-048348	Ictidomys tridecemlineatus	98.62	0.00e+00	2560.00
IUUC-Lch-050517	Latimeria chalumnae	75.83	0.00e+00	2058.00
IUUC-Laf-054098	Loxodonta africana	89.08	0.00e+00	2249.00
IUUC-Mcc-055740	Macaca mulatta	99.42	0.00e+00	2580.00
IUUC-Meu-056643	Macropus eugenii	86.25	0.00e+00	2204.00
IUUC-Mtr-058113	Medicago truncatula	32.78	9.00e-98	352.00
IUUC-Mmr-061032	Microcebus murinus	98.76	0.00e+00	2538.00
IUUC-Mdo-062754	Monodelphis domestica	82.50	0.00e+00	2125.00
IUUC-Mmu-063943	Mus musculus	96.65	0.00e+00	2519.00
IUUC-Mpu-066800	Mustela putorius furo	98.39	0.00e+00	2526.00
IUUC-Mlu-067109	Myotis lucifugus	97.58	0.00e+00	2503.00
IUUC-Ncr-068763	Neurospora crassa	28.46	2.00e-140	494.00
IUUC-Ont-072274	Oreochromis niloticus	69.21	0.00e+00	1821.00
IUUC-Oan-073160	Ornithorhynchus anatinus	86.87	0.00e+00	2218.00
IUUC-Ocu-074440	Oryctolagus cuniculus	98.76	0.00e+00	2510.00
IUUC-Oin-079273	Oryza indica	37.84	1.00e-13	69.30
IUUC-Ola-087059	Oryzias latipes	69.28	0.00e+00	1861.00
IUUC-Oga-088191	Otolemur garnettii	98.03	0.00e+00	2573.00
IUUC-Oar-090027	Ovis aries	98.75	0.00e+00	2525.00
IUUC-Ptr-091415	Pan troglodytes	88.01	0.00e+00	2278.00
IUUC-Pan-091829	Papio anubis	99.49	0.00e+00	2568.00
IUUC-Pma-094137	Petromyzon marinus	52.57	0.00e+00	1354.00
IUUC-Pno-094879	Phaeosphaeria nodorum	29.80	8.00e-114	405.00
IUUC-Pfo-096645	Poecilia formosa	65.44	0.00e+00	1795.00
IUUC-Pab-097582	Pongo abelii	96.20	0.00e+00	2394.00
IUUC-Pca-100446	Procavia capensis	94.75	0.00e+00	2451.00
IUUC-Ppe-101504	Prunus persica	32.56	1.00e-103	371.00
IUUC-Pva-102553	Pteropus vampyrus	94.28	0.00e+00	1637.00
IUUC-Rno-105359	Rattus norvegicus	81.15	0.00e+00	2237.00
IUUC-Sha-106769	Sarcophilus harrisii	88.21	0.00e+00	2131.00
IUUC-Sre-115161	Sporisorium reilianum	30.49	1.00e-132	468.00
IUUC-Ssc-116354	Sus scrofa	98.98	0.00e+00	2584.00
IUUC-Tru-117667	Takifugu rubripes	65.30	0.00e+00	1658.00
IUUC-Tni-119920	Tetraodon nigroviridis	68.75	0.00e+00	1767.00
IUUC-Tca-121478	Theobroma cacao	32.40	2.00e-106	381.00
IUUC-Tre-122213	Trichoderma reesei	29.45	3.00e-109	390.00
IUUC-Tbe-128040	Tupaia belangeri	99.46	0.00e+00	1084.00
IUUC-Ttr-128979	Tursiops truncatus	98.62	0.00e+00	2565.00
IUUC-Vpa-130433	Vicugna pacos	99.47	0.00e+00	1809.00
IUUC-Vvi-131071	Vitis vinifera	32.13	5.00e-86	313.00
IUUC-Xtr-132324	Xenopus tropicalis	72.57	0.00e+00	1874.00
IUUC-Xma-134315	Xiphophorus maculatus	68.97	0.00e+00	1830.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence