iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099329

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_644959; POPTR_0002s22790g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s22790	POPTR_0002s22790.1	POPTR_0002s22790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-20	73.5	176	211

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtc..laf.sdtllvsGsdDgtikvWDlrtg 33
           gH d  +c  ++  ++ ++v+Gs+D+t+k+WD+r +
   Q: 176  GHRDYARCgdCSPiNGEIFVTGSYDHTVKLWDVRVD 211
           788888886666577799**************9866 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MADLLVEQPR EITISKTFPT KPKLKPKAKT PSKTPESKYW SSFKSHQISN LISSIPSIDF 60
SPISPHQFAA ANSASLTLFS SQTLSPTSTI SFSDVVTSCS FRCDGSLIAA SDLSGLIRVF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCTGCGAGC AATTGTATAA CTCTATGTGC AAACCACTGC TAAAACCCTA AAAGAAAAGC 60
AAAGCCATCT GCAATGGCAG ACCTTCTTGT AGAACAACCC CGAGAAATCA CCATCTCTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR018983--U3_snoRNA-assocProt_15_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09384--UTP15_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

KEGG

pop:POPTR_0002s22790g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002117	Ailuropoda melanoleuca	33.94	5.00e-68	251.00
IUUC-Apl-003926	Anas platyrhynchos	32.63	3.00e-70	258.00
IUUC-Aca-004271	Anolis carolinensis	34.52	2.00e-70	259.00
IUUC-Ago-007973	Ashbya gossypii	31.67	1.00e-50	193.00
IUUC-Acl-008287	Aspergillus clavatus	28.00	4.00e-34	139.00
IUUC-Afu-008983	Aspergillus fumigatus	27.98	3.00e-31	129.00
IUUC-Ang-009690	Aspergillus niger	27.72	2.00e-43	170.00
IUUC-Ame-011814	Astyanax mexicanus	33.76	1.00e-67	250.00
IUUC-Bta-013068	Bos taurus	34.01	3.00e-69	255.00
IUUC-Cja-019139	Callithrix jacchus	34.01	5.00e-69	254.00
IUUC-Cfa-020742	Canis familiaris	33.40	1.00e-66	247.00
IUUC-Cpo-021707	Cavia porcellus	33.81	4.00e-68	251.00
IUUC-Cre-022665	Chlamydomonas reinhardtii	36.33	3.00e-75	275.00
IUUC-Csa-023024	Chlorocebus sabaeus	33.81	5.00e-69	254.00
IUUC-Cho-024487	Choloepus hoffmanni	37.08	5.00e-50	191.00
IUUC-Cin-025294	Ciona intestinalis	32.85	4.00e-67	248.00
IUUC-Cgl-026388	Colletotrichum gloeosporioides	30.28	7.00e-29	121.00
IUUC-Cme-027108	Cyanidioschyzon merolae	27.24	4.00e-40	158.00
IUUC-Dre-028316	Danio rerio	33.60	4.00e-66	244.00
IUUC-Dno-028985	Dasypus novemcinctus	33.20	1.00e-66	246.00
IUUC-Dor-030219	Dipodomys ordii	28.65	1.00e-28	120.00
IUUC-Dme-031769	Drosophila melanogaster	29.70	5.00e-49	188.00
IUUC-Ete-032630	Echinops telfairi	37.72	1.00e-53	203.00
IUUC-Eca-033816	Equus caballus	34.01	3.00e-69	255.00
IUUC-Eeu-034840	Erinaceus europaeus	42.13	3.00e-51	195.00
IUUC-Fca-035751	Felis catus	33.60	3.00e-68	252.00
IUUC-Fal-036733	Ficedula albicollis	31.50	5.00e-72	264.00
IUUC-Fox-037743	Fusarium oxysporum	33.66	6.00e-46	178.00
IUUC-Fso-038395	Fusarium solani	33.67	8.00e-45	174.00
IUUC-Gmo-038803	Gadus morhua	33.56	3.00e-70	258.00
IUUC-Ggr-040092	Gaeumannomyces graminis	31.50	9.00e-36	144.00
IUUC-Gga-040714	Gallus gallus	31.95	1.00e-72	266.00
IUUC-Gac-042640	Gasterosteus aculeatus	32.04	4.00e-72	265.00
IUUC-Gma-044192	Glycine max	68.47	0.00e+00	662.00
IUUC-Ggo-045616	Gorilla gorilla	32.99	6.00e-68	251.00
IUUC-Hsa-046720	Homo sapiens	33.81	2.00e-66	246.00
IUUC-Itr-048796	Ictidomys tridecemlineatus	32.99	1.00e-64	240.00
IUUC-Kpa-049291	Komagataella pastoris	30.60	1.00e-49	190.00
IUUC-Lch-049729	Latimeria chalumnae	32.87	9.00e-68	250.00
IUUC-Loc-051756	Lepisosteus oculatus	32.54	1.00e-70	260.00
IUUC-Laf-054067	Loxodonta africana	34.57	4.00e-69	255.00
IUUC-Mcc-055096	Macaca mulatta	33.81	5.00e-69	254.00
IUUC-Meu-056604	Macropus eugenii	35.29	7.00e-62	231.00
IUUC-Mla-059116	Melampsora laricipopulina	30.64	2.00e-56	213.00
IUUC-Mga-060038	Meleagris gallopavo	31.54	1.00e-51	196.00
IUUC-Mmr-060877	Microcebus murinus	34.62	1.00e-70	259.00
IUUC-Mdo-062168	Monodelphis domestica	35.24	4.00e-68	251.00
IUUC-Mmu-063441	Mus musculus	33.40	9.00e-69	253.00
IUUC-Mpu-065704	Mustela putorius furo	33.81	7.00e-69	254.00
IUUC-Mlu-067640	Myotis lucifugus	34.22	8.00e-70	257.00
IUUC-Ncr-068769	Neurospora crassa	30.65	2.00e-34	139.00
IUUC-Nle-069105	Nomascus leucogenys	34.29	3.00e-66	245.00
IUUC-Opr-070203	Ochotona princeps	33.20	3.00e-70	258.00
IUUC-Ont-072054	Oreochromis niloticus	34.26	2.00e-71	263.00
IUUC-Oan-073624	Ornithorhynchus anatinus	33.91	2.00e-66	246.00
IUUC-Ocu-074326	Oryctolagus cuniculus	33.81	1.00e-66	246.00
IUUC-Ola-087115	Oryzias latipes	34.26	4.00e-70	258.00
IUUC-Oga-088204	Otolemur garnettii	33.60	4.00e-68	251.00
IUUC-Oar-089297	Ovis aries	33.74	1.00e-66	246.00
IUUC-Ptr-090953	Pan troglodytes	33.81	3.00e-68	252.00
IUUC-Pan-092451	Papio anubis	32.99	3.00e-68	251.00
IUUC-Psi-092999	Pelodiscus sinensis	33.07	2.00e-73	269.00
IUUC-Pma-094304	Petromyzon marinus	35.37	6.00e-56	211.00
IUUC-Pno-095060	Phaeosphaeria nodorum	32.31	3.00e-40	159.00
IUUC-Ppa-095433	Physcomitrella patens	39.49	5.00e-106	377.00
IUUC-Pfo-096433	Poecilia formosa	31.37	4.00e-62	231.00
IUUC-Pab-098677	Pongo abelii	34.22	4.00e-69	254.00
IUUC-Pca-100444	Procavia capensis	38.08	2.00e-54	206.00
IUUC-Pva-102162	Pteropus vampyrus	29.94	5.00e-53	201.00
IUUC-Rno-105004	Rattus norvegicus	33.20	8.00e-68	250.00
IUUC-Sce-106443	Saccharomyces cerevisiae	30.04	6.00e-49	187.00
IUUC-Sha-107199	Sarcophilus harrisii	34.65	3.00e-70	258.00
IUUC-Sja-107670	Schizosaccharomyces japonicus	32.48	3.00e-65	242.00
IUUC-Spo-108125	Schizosaccharomyces pombe	30.62	5.00e-62	231.00
IUUC-Smo-109588	Selaginella moellendorffii	41.14	2.00e-107	382.00
IUUC-Sar-113359	Sorex araneus	33.13	2.00e-33	135.00
IUUC-Sre-114995	Sporisorium reilianum	31.06	2.00e-53	202.00
IUUC-Ssc-115397	Sus scrofa	34.01	1.00e-68	253.00
IUUC-Tgu-116834	Taeniopygia guttata	31.76	7.00e-74	270.00
IUUC-Tru-118764	Takifugu rubripes	32.35	1.00e-73	270.00
IUUC-Tsy-119118	Tarsius syrichta	33.40	4.00e-68	251.00
IUUC-Tni-120053	Tetraodon nigroviridis	32.74	7.00e-73	267.00
IUUC-Tvi-122288	Trichoderma virens	31.94	1.00e-35	144.00
IUUC-Tme-127164	Tuber melanosporum	30.94	1.00e-54	207.00
IUUC-Tbe-127458	Tupaia belangeri	34.39	9.00e-67	247.00
IUUC-Ttr-128680	Tursiops truncatus	33.27	9.00e-65	240.00
IUUC-Uma-129508	Ustilago maydis	30.52	2.00e-52	199.00
IUUC-Vpa-130820	Vicugna pacos	33.40	9.00e-68	250.00
IUUC-Xtr-131826	Xenopus tropicalis	32.21	5.00e-75	274.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence