iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118405

Ensembl Protein ID

ENSTRUP00000019525.1

UniProt Accession

H2T4D7; H2T4D7_TAKRU

Protein Name

Uncharacterized protein

Gene Name

med16

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000007850.1	ENSTRUT00000019604.1	ENSTRUP00000019525.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-07	31.2	70	103

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           gHt+ ++cl++  s+ +l+s+ +Dg+ik+W++++
   Q: 70   GHTEVISCLEWdqSGSRLLSADGDGQIKCWSMSD 103
           8**********965599*************9876 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

IMELAYVCEW EKRPKCTHCP SIPLVCSWSC RNLVAFTTDL KNDDEDKEIS HMIHIIDTEH 60
PWDVYCISSG HTEVISCLEW DQSGSRLLSA DGDGQIKCWS MSDHLVNSWE NILLSSVDGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCTGACAT AAGTTGGATA TGAATGAAAT CAAGAAAGGT GTTCAAGACC TGGATGACTG 60
AAAGTCTACA CATTTTAGGG GTTTGTTAAT ATCACTACTT ATCTAAGACA TTTTAATGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021665--Mediator_Med16
IPR011041--Quinoprot_gluc/sorb_DH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11635--Med16

SMART

SM00320--WD40

Gene Ontology

GO:0016592--C:mediator complex
GO:0003824--F:catalytic activity
GO:0003713--F:transcription coactivator activity
GO:0045893--P:positive regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011407	Astyanax mexicanus	81.17	0.00e+00	1366.00
IUUC-Bta-012729	Bos taurus	74.85	0.00e+00	1272.00
IUUC-Cja-019000	Callithrix jacchus	77.42	4.00e-79	287.00
IUUC-Cfa-020876	Canis familiaris	75.69	0.00e+00	1310.00
IUUC-Cpo-021655	Cavia porcellus	74.61	0.00e+00	1270.00
IUUC-Dre-027473	Danio rerio	85.29	0.00e+00	1446.00
IUUC-Dno-029564	Dasypus novemcinctus	76.50	0.00e+00	909.00
IUUC-Eca-033914	Equus caballus	77.94	0.00e+00	776.00
IUUC-Fca-036338	Felis catus	77.13	0.00e+00	702.00
IUUC-Fal-037249	Ficedula albicollis	77.98	0.00e+00	1374.00
IUUC-Gmo-039447	Gadus morhua	80.51	0.00e+00	641.00
IUUC-Gga-041100	Gallus gallus	77.58	0.00e+00	1284.00
IUUC-Gac-042603	Gasterosteus aculeatus	84.90	0.00e+00	647.00
IUUC-Ggo-044794	Gorilla gorilla	77.62	0.00e+00	991.00
IUUC-Hsa-045722	Homo sapiens	76.33	0.00e+00	699.00
IUUC-Itr-048948	Ictidomys tridecemlineatus	76.11	0.00e+00	1306.00
IUUC-Loc-052871	Lepisosteus oculatus	85.87	0.00e+00	1451.00
IUUC-Mcc-055201	Macaca mulatta	77.71	0.00e+00	997.00
IUUC-Mga-059807	Meleagris gallopavo	73.88	0.00e+00	1253.00
IUUC-Mmr-060781	Microcebus murinus	74.15	0.00e+00	1303.00
IUUC-Mpu-066388	Mustela putorius furo	75.81	0.00e+00	1310.00
IUUC-Ont-072316	Oreochromis niloticus	93.28	0.00e+00	1547.00
IUUC-Ola-086721	Oryzias latipes	89.94	0.00e+00	1470.00
IUUC-Oga-088875	Otolemur garnettii	76.31	0.00e+00	1301.00
IUUC-Oar-090444	Ovis aries	75.93	0.00e+00	1300.00
IUUC-Ptr-091117	Pan troglodytes	77.15	0.00e+00	685.00
IUUC-Pan-091807	Papio anubis	75.69	0.00e+00	1235.00
IUUC-Pfo-097356	Poecilia formosa	92.21	0.00e+00	1524.00
IUUC-Pab-097953	Pongo abelii	76.55	0.00e+00	956.00
IUUC-Pca-100896	Procavia capensis	75.06	0.00e+00	1270.00
IUUC-Rno-105038	Rattus norvegicus	75.24	0.00e+00	1301.00
IUUC-Tgu-116750	Taeniopygia guttata	77.74	0.00e+00	1366.00
IUUC-Tni-120217	Tetraodon nigroviridis	97.62	0.00e+00	1234.00
IUUC-Ttr-129222	Tursiops truncatus	75.15	0.00e+00	1257.00
IUUC-Xtr-132084	Xenopus tropicalis	75.24	0.00e+00	1239.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence