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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-006683
Ensembl Protein ID AT2G30910.1
UniProt Accession O80856; ARC1A_ARATH
Genbank Protein ID AAC20725.1; AEC08455.1; AEC08457.1; AAO42862.1; BAE99541.1
Protein Name Actin-related protein 2/3 complex subunit 1A; Actin-related protein C1; Actin-related protein C1A; Arp2/3 complex 41 kDa subunit; p41-ARC
Genbank Nucleotide ID AC004669; CP002685; CP002685; BT004616; AK227543
Gene Name ARPC1A; At2g30910; F7F1.12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G30910 AT2G30910.1 AT2G30910.1
AT2G30910 AT2G30910.2 AT2G30910.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
HINTMentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.90e-16 60.4 144 173
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++svt++a+ ++  ll++ s Dg+++v++
   Q: 144  HESSVTSVAWhPNnVLLATTSTDGKCRVFS 173
           9**********66699************97 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
 Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
Protein Sequence
(Fasta)
MAVVDVHRFA ESITCHAWSP DLSMVALCPN NTEVHIYKSL SQDHWERLHV LQKHDQIVSG 60
IDWSSKSNKI VTVSHDRNSY VWSLEGAEWV PTLVILRLNR AALCVQWSPK ENKFAVGSGA 120
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Protein Fasta Sequence


>IUUC-Ath-006683|E3,WD_repeat|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
GTTTGCCCAA AAATAAAGGT CCAAGTAAAA CTGAAATTGA TCTGGTCATA AAAATTGGGG 60
CTTTAGTAAA AAAAAAAAAA AAAAAAAAAA CATCTGTCTC TTTCACTTCA CGTTTGCGAC 120
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Nucleotide Fasta Sequence


>IUUC-Ath-006683|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0009--Actin-binding
KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR024977--Apc4_WD40_dom
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12894--ANAPC4_WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0051015--F:actin filament binding
GO:0007015--P:actin filament organization
GO:0034314--P:Arp2/3 complex-mediated actin nucleation
KEGG ath:AT2G30910
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001709 Ailuropoda melanoleuca 41.82 1.00e-79 289.00
IUUC-Apl-003325 Anas platyrhynchos 42.25 3.00e-79 287.00
IUUC-Aca-004736 Anolis carolinensis 41.98 8.00e-79 286.00
IUUC-Aly-005532 Arabidopsis lyrata 96.83 0.00e+00 734.00
IUUC-Ago-007966 Ashbya gossypii 33.51 1.00e-53 202.00
IUUC-Acl-008334 Aspergillus clavatus 37.99 2.00e-64 238.00
IUUC-Afl-008485 Aspergillus flavus 37.84 1.00e-60 227.00
IUUC-Afu-008780 Aspergillus fumigatus 37.83 4.00e-64 237.00
IUUC-Ani-009417 Aspergillus nidulans 39.31 7.00e-64 236.00
IUUC-Ang-009543 Aspergillus niger 38.89 4.00e-64 237.00
IUUC-Aor-010234 Aspergillus oryzae 38.10 8.00e-64 236.00
IUUC-Ate-010386 Aspergillus terreus 38.27 6.00e-62 230.00
IUUC-Ame-011512 Astyanax mexicanus 41.73 6.00e-81 293.00
IUUC-Bgr-012192 Blumeria graminis 35.47 1.00e-57 216.00
IUUC-Bta-012442 Bos taurus 40.92 2.00e-77 282.00
IUUC-Bci-013616 Botrytis cinerea 37.87 6.00e-60 223.00
IUUC-Bdi-014632 Brachypodium distachyon 72.04 2.00e-160 557.00
IUUC-Bol-016274 Brassica oleracea 93.44 0.00e+00 713.00
IUUC-Bra-016790 Brassica rapa 93.18 0.00e+00 704.00
IUUC-Cel-018122 Caenorhabditis elegans 39.66 3.00e-64 238.00
IUUC-Cja-019362 Callithrix jacchus 41.64 1.00e-76 279.00
IUUC-Cfa-020167 Canis familiaris 41.64 9.00e-77 280.00
IUUC-Cpo-022461 Cavia porcellus 41.73 1.00e-79 289.00
IUUC-Cre-022590 Chlamydomonas reinhardtii 40.84 2.00e-40 157.00
IUUC-Csa-023277 Chlorocebus sabaeus 41.02 3.00e-76 278.00
IUUC-Cho-024449 Choloepus hoffmanni 26.75 3.00e-17 82.00
IUUC-Cin-025186 Ciona intestinalis 35.99 6.00e-61 227.00
IUUC-Csv-026275 Ciona savignyi 35.99 5.00e-62 230.00
IUUC-Cgl-026732 Colletotrichum gloeosporioides 35.11 2.00e-55 208.00
IUUC-Cne-026926 Cryptococcus neoformans 36.97 1.00e-69 256.00
IUUC-Dre-028141 Danio rerio 41.19 1.00e-81 296.00
IUUC-Dno-029092 Dasypus novemcinctus 42.47 3.00e-75 275.00
IUUC-Dor-030559 Dipodomys ordii 41.08 1.00e-78 285.00
IUUC-Dse-031574 Dothistroma septosporum 37.63 1.00e-63 236.00
IUUC-Dme-031907 Drosophila melanogaster 37.87 2.00e-64 238.00
IUUC-Ete-032299 Echinops telfairi 42.74 4.00e-81 294.00
IUUC-Eca-033593 Equus caballus 41.73 4.00e-80 290.00
IUUC-Eeu-035041 Erinaceus europaeus 30.58 3.00e-17 82.00
IUUC-Fca-036254 Felis catus 41.89 2.00e-79 288.00
IUUC-Fal-037453 Ficedula albicollis 41.89 1.00e-81 295.00
IUUC-Fox-037842 Fusarium oxysporum 36.70 1.00e-61 229.00
IUUC-Fso-038276 Fusarium solani 37.23 7.00e-61 226.00
IUUC-Gmo-039673 Gadus morhua 39.95 2.00e-73 268.00
IUUC-Ggr-039762 Gaeumannomyces graminis 37.77 2.00e-59 221.00
IUUC-Gga-040898 Gallus gallus 43.24 2.00e-81 295.00
IUUC-Gac-042531 Gasterosteus aculeatus 39.43 2.00e-73 268.00
IUUC-Gma-042803 Glycine max 77.19 6.00e-166 575.00
IUUC-Ggo-045355 Gorilla gorilla 30.19 2.00e-42 165.00
IUUC-Hsa-046623 Homo sapiens 41.62 6.00e-79 286.00
IUUC-Hvu-047456 Hordeum vulgare 63.13 2.00e-62 230.00
IUUC-Itr-048596 Ictidomys tridecemlineatus 42.01 2.00e-80 291.00
IUUC-Kpa-049288 Komagataella pastoris 36.59 1.00e-51 196.00
IUUC-Lch-049679 Latimeria chalumnae 42.28 4.00e-80 290.00
IUUC-Lpe-050869 Leersia perrieri 71.12 2.00e-156 544.00
IUUC-Loc-052140 Lepisosteus oculatus 41.73 4.00e-76 277.00
IUUC-Lma-053109 Leptosphaeria maculans 38.10 1.00e-62 233.00
IUUC-Laf-054271 Loxodonta africana 41.98 3.00e-76 277.00
IUUC-Mcc-054857 Macaca mulatta 42.39 6.00e-75 273.00
IUUC-Meu-056302 Macropus eugenii 43.24 3.00e-83 301.00
IUUC-Mor-057167 Magnaporthe oryzae 38.13 3.00e-60 224.00
IUUC-Mtr-057659 Medicago truncatula 77.72 2.00e-171 594.00
IUUC-Mla-058886 Melampsora laricipopulina 38.81 5.00e-71 260.00
IUUC-Mga-059279 Meleagris gallopavo 43.24 1.00e-81 296.00
IUUC-Mvi-060302 Microbotryum violaceum 36.54 6.00e-67 247.00
IUUC-Mmr-060752 Microcebus murinus 41.76 5.00e-79 287.00
IUUC-Mdo-062326 Monodelphis domestica 41.91 2.00e-77 282.00
IUUC-Mmu-064099 Mus musculus 41.94 7.00e-81 293.00
IUUC-Mac-064632 Musa acuminata 75.27 9.00e-165 572.00
IUUC-Mpu-066247 Mustela putorius furo 41.19 2.00e-78 285.00
IUUC-Mlu-067571 Myotis lucifugus 42.01 6.00e-80 290.00
IUUC-Nfi-068383 Neosartorya fischeri 38.10 8.00e-65 239.00
IUUC-Ncr-068777 Neurospora crassa 35.81 7.00e-59 220.00
IUUC-Nle-069900 Nomascus leucogenys 41.64 1.00e-76 279.00
IUUC-Opr-070386 Ochotona princeps 37.70 2.00e-61 229.00
IUUC-Ont-071283 Oreochromis niloticus 39.95 1.00e-73 269.00
IUUC-Oan-072692 Ornithorhynchus anatinus 43.84 2.00e-81 295.00
IUUC-Ocu-074187 Oryctolagus cuniculus 41.46 1.00e-81 296.00
IUUC-Oba-075379 Oryza barthii 71.66 1.00e-157 548.00
IUUC-Obr-076404 Oryza brachyantha 70.97 4.00e-158 550.00
IUUC-Ogl-077409 Oryza glaberrima 68.28 3.00e-151 527.00
IUUC-Ogu-078759 Oryza glumaepatula 71.66 2.00e-157 548.00
IUUC-Oin-079118 Oryza indica 70.97 1.00e-158 551.00
IUUC-Olo-081055 Oryza longistaminata 72.33 7.00e-137 479.00
IUUC-Ome-081281 Oryza meridionalis 71.39 4.00e-157 546.00
IUUC-Oni-083043 Oryza nivara 71.66 1.00e-157 548.00
IUUC-Opu-083392 Oryza punctata 60.22 3.00e-125 440.00
IUUC-Oru-084839 Oryza rufipogon 71.66 1.00e-157 548.00
IUUC-Osa-085377 Oryza sativa 71.24 4.00e-159 553.00
IUUC-Ola-087274 Oryzias latipes 41.44 5.00e-74 270.00
IUUC-Oga-088610 Otolemur garnettii 41.73 4.00e-80 290.00
IUUC-Oar-089613 Ovis aries 41.91 6.00e-77 280.00
IUUC-Ptr-091023 Pan troglodytes 41.62 6.00e-79 286.00
IUUC-Pan-091727 Papio anubis 41.89 7.00e-80 290.00
IUUC-Psi-093767 Pelodiscus sinensis 41.71 1.00e-78 285.00
IUUC-Pma-094124 Petromyzon marinus 41.32 7.00e-82 296.00
IUUC-Pno-095031 Phaeosphaeria nodorum 37.30 3.00e-62 231.00
IUUC-Ppa-095738 Physcomitrella patens 59.95 7.00e-133 466.00
IUUC-Pfo-097107 Poecilia formosa 41.21 9.00e-75 273.00
IUUC-Pab-098238 Pongo abelii 41.07 4.00e-79 287.00
IUUC-Pop-098954 Populus trichocarpa 79.78 2.00e-122 430.00
IUUC-Pca-100580 Procavia capensis 41.89 1.00e-78 286.00
IUUC-Ppe-101681 Prunus persica 76.68 3.00e-172 597.00
IUUC-Pva-102928 Pteropus vampyrus 39.78 5.00e-74 270.00
IUUC-Pgr-103309 Puccinia graminis 40.81 6.00e-72 263.00
IUUC-Ptt-103959 Puccinia triticina 39.01 2.00e-69 255.00
IUUC-Pte-104384 Pyrenophora teres 38.54 8.00e-60 223.00
IUUC-Pyt-104686 Pyrenophora triticirepentis 38.54 8.00e-60 223.00
IUUC-Rno-104846 Rattus norvegicus 41.46 9.00e-80 289.00
IUUC-Sce-106411 Saccharomyces cerevisiae 34.38 2.00e-52 199.00
IUUC-Sha-106691 Sarcophilus harrisii 41.91 3.00e-77 281.00
IUUC-Sja-107792 Schizosaccharomyces japonicus 36.05 3.00e-60 224.00
IUUC-Spo-108053 Schizosaccharomyces pombe 35.52 2.00e-56 211.00
IUUC-Ssl-108606 Sclerotinia sclerotiorum 37.87 3.00e-60 224.00
IUUC-Smo-108836 Selaginella moellendorffii 60.48 6.00e-139 486.00
IUUC-Sit-110150 Setaria italica 71.16 1.00e-160 558.00
IUUC-Sly-111048 Solanum lycopersicum 75.20 4.00e-168 583.00
IUUC-Sar-113404 Sorex araneus 48.75 8.00e-65 239.00
IUUC-Sbi-114685 Sorghum bicolor 68.28 1.00e-147 515.00
IUUC-Ssc-115851 Sus scrofa 41.98 3.00e-76 278.00
IUUC-Tgu-116701 Taeniopygia guttata 42.25 1.00e-79 289.00
IUUC-Tru-117603 Takifugu rubripes 40.85 1.00e-75 276.00
IUUC-Tsy-119515 Tarsius syrichta 55.86 5.00e-42 164.00
IUUC-Tni-119844 Tetraodon nigroviridis 40.79 7.00e-74 270.00
IUUC-Tca-121645 Theobroma cacao 80.21 2.00e-172 597.00
IUUC-Tre-122045 Trichoderma reesei 37.53 2.00e-60 225.00
IUUC-Tvi-122523 Trichoderma virens 37.70 1.00e-60 226.00
IUUC-Tae-125810 Triticum aestivum 64.01 4.00e-151 526.00
IUUC-Tur-126640 Triticum urartu 67.86 1.00e-143 502.00
IUUC-Tme-127018 Tuber melanosporum 36.90 1.00e-52 199.00
IUUC-Ttr-128698 Tursiops truncatus 41.73 2.00e-79 288.00
IUUC-Uma-129423 Ustilago maydis 43.88 2.00e-63 235.00
IUUC-Vda-129706 Verticillium dahliae 35.45 7.00e-57 213.00
IUUC-Vvi-131647 Vitis vinifera 79.14 7.00e-172 595.00
IUUC-Xtr-131893 Xenopus tropicalis 41.29 2.00e-77 282.00
IUUC-Xma-133435 Xiphophorus maculatus 41.21 9.00e-75 273.00
IUUC-Yli-134471 Yarrowia lipolytica 37.97 7.00e-59 220.00
IUUC-Zma-135615 Zea mays 68.48 3.00e-158 550.00
Created Date 25-Jun-2017

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