iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109190

Ensembl Protein ID

EFJ16905

UniProt Accession

D8SFW0; D8SFW0_SELML

Genbank Protein ID

EFJ16905.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377617

Gene Name

SELMODRAFT_116002

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_116002	EFJ16905	EFJ16905

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-11	42.6	3185	3219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           H+dsvtcl+   + +l+v+Gs D+t+  WDl+t  
   Q: 3185 HSDSVTCLSVcqPYNLVVTGSSDCTVIFWDLSTLE 3219
           *********987669***************98865 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

ESEQDFKRFW EEFRCGHSDK EKQEALEMAL SVFCKLSRRH QNPAQLATSL VDTRQFAFVV 60
ARAFIADVDK IKSSTSQDTL AKSLIQGKQV PPTVSPIEKT ANMLYVLESL VSPPLDVQPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATCGGAGC AGGACTTCAA GAGATTCTGG GAGGAGTTTC GATGTGGACA CTCGGACAAG 60
GTGAGTGTGT CTCGTCTCAC TCGTGAGGAG CAAGCTTTTA AAAACTGTCG TGAGAGTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

KEGG

smo:SELMODRAFT_116002

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000317	Aegilops tauschii	48.07	0.00e+00	2976.00
IUUC-Ame-011607	Astyanax mexicanus	41.55	5.00e-172	599.00
IUUC-Bdi-015031	Brachypodium distachyon	48.10	0.00e+00	3011.00
IUUC-Bra-017449	Brassica rapa	57.40	0.00e+00	1546.00
IUUC-Dor-030745	Dipodomys ordii	36.02	4.00e-105	376.00
IUUC-Dme-031959	Drosophila melanogaster	41.96	1.00e-169	591.00
IUUC-Eeu-034853	Erinaceus europaeus	65.37	7.00e-82	300.00
IUUC-Fso-038249	Fusarium solani	38.30	8.00e-134	472.00
IUUC-Gmo-039503	Gadus morhua	42.06	4.00e-170	593.00
IUUC-Hvu-047814	Hordeum vulgare	55.86	0.00e+00	1595.00
IUUC-Lpe-050828	Leersia perrieri	48.92	0.00e+00	3063.00
IUUC-Meu-056743	Macropus eugenii	54.90	6.00e-118	419.00
IUUC-Mor-057120	Magnaporthe oryzae	39.48	4.00e-150	526.00
IUUC-Mtr-058732	Medicago truncatula	49.93	0.00e+00	3121.00
IUUC-Mac-064872	Musa acuminata	42.35	0.00e+00	1500.00
IUUC-Ont-071427	Oreochromis niloticus	43.31	9.00e-177	615.00
IUUC-Oba-075831	Oryza barthii	48.89	0.00e+00	3073.00
IUUC-Obr-076728	Oryza brachyantha	48.77	0.00e+00	3079.00
IUUC-Ogl-077922	Oryza glaberrima	48.60	0.00e+00	3037.00
IUUC-Ogu-079001	Oryza glumaepatula	48.60	0.00e+00	3037.00
IUUC-Olo-080662	Oryza longistaminata	48.49	0.00e+00	3038.00
IUUC-Ome-081733	Oryza meridionalis	49.54	0.00e+00	2999.00
IUUC-Oni-082641	Oryza nivara	48.60	0.00e+00	3037.00
IUUC-Opu-083564	Oryza punctata	48.10	0.00e+00	3019.00
IUUC-Oru-084403	Oryza rufipogon	48.55	0.00e+00	3035.00
IUUC-Pca-100146	Procavia capensis	55.10	7.00e-108	386.00
IUUC-Ptt-103873	Puccinia triticina	36.36	1.00e-97	352.00
IUUC-Sit-110811	Setaria italica	49.53	0.00e+00	2932.00
IUUC-Sbi-114421	Sorghum bicolor	48.35	0.00e+00	2994.00
IUUC-Tvi-122476	Trichoderma virens	39.34	1.00e-138	488.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence