iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005539

Ensembl Protein ID

fgenesh2_kg.8__687__AT5G48170.1

UniProt Accession

D7ML30; D7ML30_ARALL

Genbank Protein ID

EFH41873.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348720

Gene Name

SLY2; ARALYDRAFT_494871

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__687__AT5G48170.1	fgenesh2_kg.8__687__AT5G48170.1	fgenesh2_kg.8__687__AT5G48170.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	95.48	3.00e-82	300.00	IUUC-Ath-007127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSGKRISMVE KSNNKRQRVN QVPKFSINDH HDVLVEILRR LDGPSLCSAA CVCRLWSAVA 60
RNDSIWEELC FRQVSPRPSL SLRSVVSALG GYRCLYFLCI RPVLARLPKL RWTRDQLQLS 120

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Nucleotide Sequence
(Fasta)

TTTTGTTTAA CCATGTCGGG AAAAAGAATA AGCATGGTCG AGAAAAGTAA CAACAAGAGA 60
CAAAGAGTGA ACCAAGTTCC AAAGTTCAGT ATCAACGACC ACCACGACGT TCTTGTAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

Gene Ontology

GO:0019005--C:SCF ubiquitin ligase complex
GO:0009740--P:gibberellic acid mediated signaling pathway
GO:0009937--P:regulation of gibberellic acid mediated signaling pathway
GO:0048831--P:regulation of shoot system development

KEGG

aly:ARALYDRAFT_494871

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002846	Amborella trichopoda	39.16	2.00e-24	104.00
IUUC-Aca-004788	Anolis carolinensis	39.02	8.00e-04	35.40
IUUC-Ath-007127	Arabidopsis thaliana	95.48	1.00e-83	300.00
IUUC-Bdi-014290	Brachypodium distachyon	61.54	3.00e-15	73.90
IUUC-Bol-015233	Brassica oleracea	94.23	2.00e-82	296.00
IUUC-Bra-017984	Brassica rapa	95.51	3.00e-84	302.00
IUUC-Cin-025781	Ciona intestinalis	34.04	5.00e-04	38.50
IUUC-Dor-030194	Dipodomys ordii	37.18	1.00e-04	38.50
IUUC-Gac-041831	Gasterosteus aculeatus	41.46	4.00e-04	36.60
IUUC-Gma-043632	Glycine max	59.29	7.00e-40	155.00
IUUC-Lpe-050816	Leersia perrieri	44.08	2.00e-06	44.30
IUUC-Loc-052597	Lepisosteus oculatus	41.46	7.00e-05	38.90
IUUC-Laf-054453	Loxodonta africana	48.78	3.00e-05	40.40
IUUC-Mtr-057946	Medicago truncatula	57.55	6.00e-34	135.00
IUUC-Ogl-077474	Oryza glaberrima	50.00	7.00e-07	46.20
IUUC-Ogu-079029	Oryza glumaepatula	50.00	7.00e-07	46.20
IUUC-Oin-080121	Oryza indica	50.00	7.00e-07	46.20
IUUC-Ome-081968	Oryza meridionalis	65.31	2.00e-05	39.30
IUUC-Oni-082552	Oryza nivara	50.00	7.00e-07	46.20
IUUC-Opu-083746	Oryza punctata	50.35	3.00e-09	53.90
IUUC-Oru-084658	Oryza rufipogon	50.00	7.00e-07	46.20
IUUC-Osa-086295	Oryza sativa	50.00	7.00e-07	46.20
IUUC-Olu-087621	Ostreococcus lucimarinus	31.34	3.00e-04	40.40
IUUC-Pop-099566	Populus trichocarpa	63.89	6.00e-38	148.00
IUUC-Pca-100414	Procavia capensis	41.46	1.00e-03	34.70
IUUC-Ppe-102106	Prunus persica	63.71	5.00e-35	139.00
IUUC-Sly-111364	Solanum lycopersicum	50.91	1.00e-34	138.00
IUUC-Stu-112502	Solanum tuberosum	51.85	8.00e-35	138.00
IUUC-Sbi-114231	Sorghum bicolor	65.31	4.00e-05	40.40
IUUC-Tae-124891	Triticum aestivum	63.46	3.00e-15	73.90
IUUC-Vvi-130926	Vitis vinifera	58.28	6.00e-37	145.00
IUUC-Xma-133035	Xiphophorus maculatus	32.39	4.00e-04	37.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence