iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028239

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD repeat domain-containing protein 83

Genbank Nucleotide ID

BX649315

Gene Name

wdr83

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000041600.4	ENSDART00000060978.2	ENSDARP00000060977.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-37	125.5	107	140
UBD/Beta-Prp	1.60e-52	179.5	18	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH+++v+c++f  + t ++sGs Dgt+++WD+r+
   Q: 107  GHAGKVNCVQFnEEaTVMLSGSIDGTVRCWDTRS 140
           8**********54489***************987 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetl 133
            r++  ++++v+av+f+ dg++l+t+++D+ +k+w++s g+ + t++gh ++vl+ + s +++ l s s+d+t+ +wd+ +gq+ +  l
   Q: 18   WRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYTGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTR-KL 105
           5566667899****************************************************************************.** PP
   S: 134  sghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng 220
           +gh g vncv++++++ ++ sGs D+tvr Wd   ++++ ++ l +  +d + sl++++   el++gs dg+v+ +dl+ g+  + ++g
   Q: 106  RGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTrsRRMEPIQILDE-SQDGISSLKVSE--HELLTGSVDGRVRRYDLRMGQLQVDYIG 191
           *********************************6666777899988.9***********..79****************9999888876 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MAFPQPRPQA PQLPQHLWRT VDCQQGAVRA VRFNADGNYL LTCGSDKSLK LWSVSRGTLL 60
KTYTGHGYEV LDADGSYDNS QLCSCSSDKT VILWDVASGQ VTRKLRGHAG KVNCVQFNEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCTTCAGCA TACATTCACG AAAGAAACCG CTGTGTTTTC ATGCAGTTTG TGGGGTAGTT 60
TTGGGGTTTG TTGTAGTGCT GCTGTTTAAA ATAAATGACA TATTATGTAT ATAGGCTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR023302--Pept_S9A_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	75.16	6.00e-140	490.00
IUUC-Atr-002647	Amborella trichopoda	46.15	4.00e-82	297.00
IUUC-Aca-004948	Anolis carolinensis	75.91	4.00e-135	474.00
IUUC-Aly-006489	Arabidopsis lyrata	47.12	3.00e-77	281.00
IUUC-Ath-007099	Arabidopsis thaliana	46.78	6.00e-77	280.00
IUUC-Acl-008374	Aspergillus clavatus	36.09	5.00e-47	181.00
IUUC-Afl-008506	Aspergillus flavus	36.96	2.00e-49	189.00
IUUC-Afu-009098	Aspergillus fumigatus	33.23	4.00e-43	168.00
IUUC-Ang-009705	Aspergillus niger	33.87	4.00e-44	172.00
IUUC-Aor-010031	Aspergillus oryzae	36.96	2.00e-49	189.00
IUUC-Ame-011056	Astyanax mexicanus	88.57	4.00e-169	587.00
IUUC-Bgr-012109	Blumeria graminis	35.97	3.00e-48	185.00
IUUC-Bta-012476	Bos taurus	73.89	1.00e-140	492.00
IUUC-Bci-013860	Botrytis cinerea	31.08	7.00e-38	151.00
IUUC-Bdi-014565	Brachypodium distachyon	49.49	9.00e-86	310.00
IUUC-Bol-016204	Brassica oleracea	47.78	1.00e-77	282.00
IUUC-Bra-018093	Brassica rapa	47.78	2.00e-77	281.00
IUUC-Cel-018500	Caenorhabditis elegans	46.82	1.00e-77	283.00
IUUC-Cja-019279	Callithrix jacchus	72.93	3.00e-131	461.00
IUUC-Cfa-020516	Canis familiaris	74.84	1.00e-139	489.00
IUUC-Cpo-021427	Cavia porcellus	75.16	3.00e-132	464.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	44.26	5.00e-71	261.00
IUUC-Csa-023449	Chlorocebus sabaeus	72.93	3.00e-131	461.00
IUUC-Cin-025637	Ciona intestinalis	57.86	1.00e-106	379.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	34.11	6.00e-46	177.00
IUUC-Cne-026994	Cryptococcus neoformans	35.33	1.00e-48	186.00
IUUC-Dno-029408	Dasypus novemcinctus	73.89	4.00e-140	490.00
IUUC-Dor-030684	Dipodomys ordii	74.49	9.00e-87	313.00
IUUC-Dse-031344	Dothistroma septosporum	42.02	1.00e-47	183.00
IUUC-Dme-031634	Drosophila melanogaster	44.29	4.00e-73	268.00
IUUC-Ete-033126	Echinops telfairi	66.99	9.00e-123	432.00
IUUC-Eca-034356	Equus caballus	66.67	1.00e-118	419.00
IUUC-Eeu-035196	Erinaceus europaeus	73.37	7.00e-65	240.00
IUUC-Fca-036231	Felis catus	74.51	1.00e-138	485.00
IUUC-Fox-038076	Fusarium oxysporum	36.27	6.00e-51	194.00
IUUC-Fso-038093	Fusarium solani	36.46	4.00e-44	171.00
IUUC-Gmo-039056	Gadus morhua	85.81	1.00e-160	558.00
IUUC-Ggr-039981	Gaeumannomyces graminis	30.84	2.00e-37	149.00
IUUC-Gga-041042	Gallus gallus	73.60	4.00e-137	480.00
IUUC-Gac-042638	Gasterosteus aculeatus	87.78	7.00e-165	572.00
IUUC-Gma-042689	Glycine max	48.63	8.00e-85	306.00
IUUC-Ggo-044720	Gorilla gorilla	73.57	7.00e-132	463.00
IUUC-Hsa-046056	Homo sapiens	73.57	2.00e-132	464.00
IUUC-Hvu-047675	Hordeum vulgare	44.79	5.00e-80	291.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	75.91	2.00e-141	494.00
IUUC-Lch-050634	Latimeria chalumnae	74.92	3.00e-126	444.00
IUUC-Lpe-051470	Leersia perrieri	47.80	7.00e-83	300.00
IUUC-Loc-052452	Lepisosteus oculatus	80.98	4.00e-145	507.00
IUUC-Lma-053235	Leptosphaeria maculans	38.56	1.00e-26	113.00
IUUC-Laf-054315	Loxodonta africana	73.02	9.00e-133	466.00
IUUC-Mcc-054923	Macaca mulatta	73.57	3.00e-132	464.00
IUUC-Mor-056936	Magnaporthe oryzae	36.71	5.00e-41	161.00
IUUC-Mtr-058595	Medicago truncatula	49.66	3.00e-84	305.00
IUUC-Mla-058902	Melampsora laricipopulina	38.46	4.00e-60	224.00
IUUC-Mvi-060471	Microbotryum violaceum	41.53	3.00e-70	258.00
IUUC-Mmr-061665	Microcebus murinus	73.87	7.00e-140	489.00
IUUC-Mdo-062750	Monodelphis domestica	69.41	3.00e-120	424.00
IUUC-Mmu-063750	Mus musculus	73.57	2.00e-140	491.00
IUUC-Mac-065441	Musa acuminata	47.83	2.00e-83	302.00
IUUC-Mpu-066863	Mustela putorius furo	75.16	7.00e-140	489.00
IUUC-Mlu-067645	Myotis lucifugus	72.58	6.00e-137	480.00
IUUC-Nfi-068549	Neosartorya fischeri	35.71	2.00e-47	183.00
IUUC-Ncr-068816	Neurospora crassa	33.44	2.00e-35	143.00
IUUC-Nle-069457	Nomascus leucogenys	73.25	2.00e-132	465.00
IUUC-Opr-070874	Ochotona princeps	75.91	6.00e-59	221.00
IUUC-Ont-071674	Oreochromis niloticus	88.82	4.00e-147	513.00
IUUC-Oan-073391	Ornithorhynchus anatinus	74.51	3.00e-141	494.00
IUUC-Ocu-074186	Oryctolagus cuniculus	73.53	1.00e-133	469.00
IUUC-Oba-075414	Oryza barthii	49.10	5.00e-81	294.00
IUUC-Obr-076739	Oryza brachyantha	47.80	5.00e-82	297.00
IUUC-Ogl-076962	Oryza glaberrima	47.78	1.00e-82	299.00
IUUC-Ogu-078831	Oryza glumaepatula	47.78	1.00e-82	299.00
IUUC-Oin-079985	Oryza indica	47.44	2.00e-82	299.00
IUUC-Ome-081333	Oryza meridionalis	44.26	2.00e-76	279.00
IUUC-Oni-082558	Oryza nivara	47.44	2.00e-82	299.00
IUUC-Opu-084091	Oryza punctata	48.14	1.00e-83	303.00
IUUC-Oru-085253	Oryza rufipogon	47.60	4.00e-77	281.00
IUUC-Osa-086077	Oryza sativa	47.44	2.00e-82	299.00
IUUC-Ola-086946	Oryzias latipes	86.22	6.00e-163	566.00
IUUC-Olu-087604	Ostreococcus lucimarinus	36.74	8.00e-52	197.00
IUUC-Oga-088681	Otolemur garnettii	72.88	4.00e-137	480.00
IUUC-Oar-089913	Ovis aries	73.57	1.00e-137	482.00
IUUC-Ptr-091343	Pan troglodytes	73.80	2.00e-132	464.00
IUUC-Pan-092078	Papio anubis	72.93	3.00e-131	461.00
IUUC-Psi-093190	Pelodiscus sinensis	74.36	1.00e-142	499.00
IUUC-Pno-095078	Phaeosphaeria nodorum	39.13	2.00e-53	202.00
IUUC-Ppa-095777	Physcomitrella patens	47.80	1.00e-82	300.00
IUUC-Pfo-097153	Poecilia formosa	88.56	1.00e-152	532.00
IUUC-Pab-098307	Pongo abelii	73.02	6.00e-130	456.00
IUUC-Pop-099315	Populus trichocarpa	47.78	2.00e-77	282.00
IUUC-Pca-100538	Procavia capensis	75.37	3.00e-121	427.00
IUUC-Ppe-101632	Prunus persica	45.82	5.00e-82	297.00
IUUC-Pva-102484	Pteropus vampyrus	74.18	7.00e-140	489.00
IUUC-Pgr-103495	Puccinia graminis	36.90	6.00e-59	220.00
IUUC-Ptt-103975	Puccinia triticina	36.40	1.00e-57	216.00
IUUC-Pte-104354	Pyrenophora teres	37.88	1.00e-39	156.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	37.88	8.00e-39	154.00
IUUC-Rno-105655	Rattus norvegicus	73.25	2.00e-139	488.00
IUUC-Sha-107130	Sarcophilus harrisii	71.97	3.00e-97	347.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	38.85	3.00e-55	208.00
IUUC-Spo-108131	Schizosaccharomyces pombe	39.57	2.00e-56	212.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	33.22	2.00e-41	162.00
IUUC-Smo-109004	Selaginella moellendorffii	46.44	7.00e-77	280.00
IUUC-Sit-110508	Setaria italica	48.14	2.00e-84	305.00
IUUC-Sly-111093	Solanum lycopersicum	47.47	6.00e-77	280.00
IUUC-Stu-112380	Solanum tuberosum	47.47	8.00e-77	280.00
IUUC-Sar-113127	Sorex araneus	71.72	3.00e-57	215.00
IUUC-Sbi-114461	Sorghum bicolor	47.80	3.00e-83	301.00
IUUC-Sre-115020	Sporisorium reilianum	37.79	1.00e-40	161.00
IUUC-Ssc-115632	Sus scrofa	74.84	2.00e-139	488.00
IUUC-Tru-118039	Takifugu rubripes	84.69	1.00e-148	519.00
IUUC-Tsy-119239	Tarsius syrichta	73.96	6.00e-75	274.00
IUUC-Tni-120097	Tetraodon nigroviridis	84.03	7.00e-146	509.00
IUUC-Tca-121695	Theobroma cacao	49.16	5.00e-85	307.00
IUUC-Tre-122182	Trichoderma reesei	34.24	1.00e-42	167.00
IUUC-Tvi-122429	Trichoderma virens	35.28	2.00e-47	182.00
IUUC-Tae-125136	Triticum aestivum	48.81	6.00e-85	307.00
IUUC-Tur-126216	Triticum urartu	48.65	4.00e-84	304.00
IUUC-Tme-127030	Tuber melanosporum	42.28	1.00e-58	219.00
IUUC-Tbe-127686	Tupaia belangeri	71.43	1.00e-79	289.00
IUUC-Ttr-128770	Tursiops truncatus	75.49	6.00e-141	493.00
IUUC-Uma-129446	Ustilago maydis	33.77	6.00e-37	149.00
IUUC-Vda-129680	Verticillium dahliae	35.55	2.00e-36	145.00
IUUC-Vvi-131292	Vitis vinifera	47.60	1.00e-82	300.00
IUUC-Xtr-132204	Xenopus tropicalis	73.87	2.00e-138	485.00
IUUC-Xma-133727	Xiphophorus maculatus	86.26	1.00e-151	529.00
IUUC-Zma-135908	Zea mays	47.80	9.00e-78	283.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence