iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114582

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G220300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g028660	Sb07g028660.1	Sb07g028660.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-42	140.0	232	273
UBD/Beta-Prp	2.20e-49	169.1	616	847

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..........sdtllvsGsdDgtikvWDlrt 32
           gH+d++++l+f          ++ +lvs+s D ti++W +++
   Q: 232  GHSDWIRSLDFslpvmmggekHNLFLVSSSQDRTIRIWKMTS 273
           8************9999987644679************9876 PP

UBD/Beta-Prp

   S: 20   pdksllatgsrdgt.....ikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls......tgkcvhtlkghedsvlslsfsp 104
            +++l+a++++ ++     i +w+v t+k++ +l++h+ +vt+++fs+d  +l+++s+Dr++ ++++s          v +l++h++ ++++s++p
   Q: 616  YEGKLVASSCKAQSaavaeIWLWEVGTWKAVGRLQSHNLTVTQMEFSRDNVFLLSVSRDRHLSIFSISkteegaEHRLVAKLEAHKRIIWACSWNP 711
           37777777776654222227899***************************9**************999999999999******************* PP
   S: 105  sgdklvsGshdrtirvwdletgqclee.......tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..............ktgkllrtl...t 176
            g+ +++Gs+d+ +++w ++  + ++         +s++  + +c    +++ +l+ G++++ + lW++               +  +  ++    
   Q: 712  FGYEFATGSRDKSVKIWCVKDASSVKLlatlpqfRDSVTALAWMCHDRASNAGVLAVGMDNGLIELWSVsggrasagstpdspLSVACTLRFdpvL 807
           *****************9998888876886655333333333344444455589********************9999999886666666677765 PP
   S: 177  gghtdsvyslsfdsng.......kelvsgsldgtvklwdlq 210
             h + v+ l +++ +        el+s++ d tv++++++
   Q: 808  C-HVSTVHRLRWREPSstdeestLELASCGADHTVRVFEVR 847
           5.88888888866555666667899*************987 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSPAAGEQLS GAHREGRGVE ARRVFIGAGC NRVVNNVSWG ACGLVAFGTQ NAVALFSPLR 60
GEIVTTLPGH KAPVNCTLWL PTKKDVLQVR GKETHYLLSG SADGTIMAWK IASGKGEWSH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGCCGG CCGCCGGAGA GCAGCTCTCT GGAGCCCACA GAGAGGGCAG GGGCGTGGAG 60
GCGCGGAGGG TCTTCATAGG CGCCGGCTGC AACCGCGTGG TGAACAACGT CTCGTGGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_07g028660

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	82.90	0.00e+00	1356.00
IUUC-Aml-002049	Ailuropoda melanoleuca	36.53	1.00e-111	396.00
IUUC-Atr-002456	Amborella trichopoda	60.00	0.00e+00	1011.00
IUUC-Apl-004053	Anas platyrhynchos	37.33	1.00e-132	466.00
IUUC-Aca-004535	Anolis carolinensis	33.04	9.00e-113	400.00
IUUC-Aly-005746	Arabidopsis lyrata	60.12	0.00e+00	1003.00
IUUC-Ath-006664	Arabidopsis thaliana	59.39	0.00e+00	974.00
IUUC-Ago-007971	Ashbya gossypii	28.82	8.00e-81	294.00
IUUC-Acl-008173	Aspergillus clavatus	31.43	9.00e-101	360.00
IUUC-Afl-008665	Aspergillus flavus	29.72	3.00e-42	166.00
IUUC-Afu-008976	Aspergillus fumigatus	31.07	2.00e-97	349.00
IUUC-Ani-009284	Aspergillus nidulans	30.84	3.00e-95	342.00
IUUC-Ang-009809	Aspergillus niger	30.30	2.00e-90	326.00
IUUC-Aor-009959	Aspergillus oryzae	32.25	3.00e-102	365.00
IUUC-Ate-010442	Aspergillus terreus	30.95	3.00e-99	355.00
IUUC-Ame-011409	Astyanax mexicanus	35.44	2.00e-124	439.00
IUUC-Bgr-012137	Blumeria graminis	31.14	8.00e-98	350.00
IUUC-Bta-012892	Bos taurus	35.31	5.00e-129	454.00
IUUC-Bci-013944	Botrytis cinerea	31.77	1.00e-87	316.00
IUUC-Bdi-014512	Brachypodium distachyon	84.33	0.00e+00	1438.00
IUUC-Bol-015741	Brassica oleracea	60.17	0.00e+00	1013.00
IUUC-Bra-017367	Brassica rapa	60.36	0.00e+00	1016.00
IUUC-Cel-018712	Caenorhabditis elegans	29.04	4.00e-73	268.00
IUUC-Cja-018865	Callithrix jacchus	33.19	6.00e-122	431.00
IUUC-Cfa-021006	Canis familiaris	36.35	9.00e-132	463.00
IUUC-Cpo-021370	Cavia porcellus	37.14	1.00e-133	469.00
IUUC-Csa-023845	Chlorocebus sabaeus	35.49	1.00e-129	456.00
IUUC-Cho-024640	Choloepus hoffmanni	37.13	8.00e-85	307.00
IUUC-Cin-025772	Ciona intestinalis	34.30	2.00e-111	395.00
IUUC-Csv-025891	Ciona savignyi	34.13	8.00e-117	413.00
IUUC-Cgl-026443	Colletotrichum gloeosporioides	30.23	3.00e-92	332.00
IUUC-Cne-027081	Cryptococcus neoformans	32.83	8.00e-92	330.00
IUUC-Cme-027225	Cyanidioschyzon merolae	29.32	2.00e-45	177.00
IUUC-Dre-028250	Danio rerio	34.45	9.00e-123	433.00
IUUC-Dno-028847	Dasypus novemcinctus	36.13	2.00e-128	452.00
IUUC-Dor-030351	Dipodomys ordii	34.50	3.00e-124	438.00
IUUC-Dse-031317	Dothistroma septosporum	30.36	5.00e-91	328.00
IUUC-Dme-032019	Drosophila melanogaster	32.76	2.00e-120	425.00
IUUC-Ete-033194	Echinops telfairi	34.71	2.00e-74	272.00
IUUC-Eca-033779	Equus caballus	35.57	3.00e-131	461.00
IUUC-Eeu-034790	Erinaceus europaeus	33.98	2.00e-72	266.00
IUUC-Fca-036090	Felis catus	37.04	1.00e-124	439.00
IUUC-Fal-037663	Ficedula albicollis	39.62	8.00e-123	433.00
IUUC-Fox-037828	Fusarium oxysporum	30.50	7.00e-99	354.00
IUUC-Fso-038462	Fusarium solani	31.47	3.00e-94	338.00
IUUC-Gmo-039450	Gadus morhua	35.15	8.00e-131	460.00
IUUC-Ggr-040023	Gaeumannomyces graminis	29.96	2.00e-88	320.00
IUUC-Gga-040480	Gallus gallus	35.90	2.00e-137	482.00
IUUC-Gac-041544	Gasterosteus aculeatus	36.47	2.00e-137	482.00
IUUC-Gma-044048	Glycine max	64.27	0.00e+00	1118.00
IUUC-Ggo-045381	Gorilla gorilla	33.64	5.00e-116	411.00
IUUC-Hsa-046096	Homo sapiens	32.87	1.00e-119	423.00
IUUC-Hvu-047494	Hordeum vulgare	84.24	0.00e+00	1449.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	30.56	2.00e-97	349.00
IUUC-Kpa-049241	Komagataella pastoris	29.91	2.00e-88	319.00
IUUC-Lch-050512	Latimeria chalumnae	39.91	5.00e-125	441.00
IUUC-Lpe-051448	Leersia perrieri	82.20	0.00e+00	1387.00
IUUC-Loc-051882	Lepisosteus oculatus	37.69	3.00e-137	481.00
IUUC-Lma-053023	Leptosphaeria maculans	32.31	5.00e-96	344.00
IUUC-Laf-054519	Loxodonta africana	35.64	2.00e-130	459.00
IUUC-Mcc-055580	Macaca mulatta	33.55	8.00e-123	434.00
IUUC-Meu-056606	Macropus eugenii	28.25	1.00e-47	184.00
IUUC-Mor-057109	Magnaporthe oryzae	32.51	4.00e-111	395.00
IUUC-Mpo-057297	Magnaporthe poae	30.02	6.00e-90	324.00
IUUC-Mtr-058348	Medicago truncatula	63.59	0.00e+00	1103.00
IUUC-Mla-059159	Melampsora laricipopulina	30.83	2.00e-88	320.00
IUUC-Mga-059778	Meleagris gallopavo	33.97	2.00e-82	298.00
IUUC-Mvi-060447	Microbotryum violaceum	31.20	9.00e-97	347.00
IUUC-Mmr-061139	Microcebus murinus	33.77	2.00e-125	442.00
IUUC-Mdo-061866	Monodelphis domestica	35.44	1.00e-134	473.00
IUUC-Mmu-063390	Mus musculus	34.97	1.00e-122	432.00
IUUC-Mac-064693	Musa acuminata	69.14	0.00e+00	1191.00
IUUC-Mpu-066547	Mustela putorius furo	35.81	5.00e-125	441.00
IUUC-Mlu-067156	Myotis lucifugus	36.84	1.00e-131	462.00
IUUC-Nfi-068616	Neosartorya fischeri	31.68	1.00e-100	360.00
IUUC-Ncr-068915	Neurospora crassa	29.83	3.00e-91	329.00
IUUC-Nle-069958	Nomascus leucogenys	35.20	1.00e-124	440.00
IUUC-Opr-071093	Ochotona princeps	35.56	8.00e-63	234.00
IUUC-Ont-072178	Oreochromis niloticus	37.59	4.00e-138	484.00
IUUC-Oan-073667	Ornithorhynchus anatinus	35.71	1.00e-125	443.00
IUUC-Ocu-074662	Oryctolagus cuniculus	36.74	4.00e-134	471.00
IUUC-Oba-075577	Oryza barthii	84.04	0.00e+00	1426.00
IUUC-Obr-076566	Oryza brachyantha	83.56	0.00e+00	1420.00
IUUC-Ogl-077054	Oryza glaberrima	83.94	0.00e+00	1422.00
IUUC-Ogu-078846	Oryza glumaepatula	83.80	0.00e+00	1419.00
IUUC-Oin-079084	Oryza indica	83.80	0.00e+00	1424.00
IUUC-Olo-080933	Oryza longistaminata	79.14	0.00e+00	1266.00
IUUC-Ome-081500	Oryza meridionalis	80.10	0.00e+00	1332.00
IUUC-Oni-082352	Oryza nivara	83.92	0.00e+00	1424.00
IUUC-Opu-084116	Oryza punctata	80.82	0.00e+00	1417.00
IUUC-Oru-085249	Oryza rufipogon	83.80	0.00e+00	1424.00
IUUC-Osa-086270	Oryza sativa	83.80	0.00e+00	1424.00
IUUC-Ola-086625	Oryzias latipes	33.60	3.00e-110	392.00
IUUC-Olu-087638	Ostreococcus lucimarinus	35.84	2.00e-96	346.00
IUUC-Oga-088634	Otolemur garnettii	36.36	4.00e-103	368.00
IUUC-Oar-089475	Ovis aries	36.36	7.00e-130	457.00
IUUC-Ptr-091131	Pan troglodytes	35.48	4.00e-129	454.00
IUUC-Pan-092869	Papio anubis	34.90	4.00e-129	454.00
IUUC-Psi-093146	Pelodiscus sinensis	37.32	5.00e-118	417.00
IUUC-Pma-094479	Petromyzon marinus	38.97	1.00e-112	400.00
IUUC-Pno-095061	Phaeosphaeria nodorum	31.65	6.00e-61	228.00
IUUC-Ppa-095618	Physcomitrella patens	49.77	0.00e+00	805.00
IUUC-Pfo-096816	Poecilia formosa	37.63	1.00e-136	479.00
IUUC-Pab-097548	Pongo abelii	35.13	1.00e-128	452.00
IUUC-Pop-099643	Populus trichocarpa	65.01	0.00e+00	1131.00
IUUC-Pca-100983	Procavia capensis	35.67	3.00e-67	249.00
IUUC-Ppe-101301	Prunus persica	65.66	0.00e+00	1126.00
IUUC-Pva-102460	Pteropus vampyrus	35.47	2.00e-123	436.00
IUUC-Pgr-103507	Puccinia graminis	31.69	9.00e-91	327.00
IUUC-Ptt-103892	Puccinia triticina	32.09	4.00e-82	298.00
IUUC-Pte-104283	Pyrenophora teres	30.98	3.00e-93	335.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	30.62	8.00e-89	320.00
IUUC-Rno-105842	Rattus norvegicus	35.42	2.00e-126	445.00
IUUC-Sce-106459	Saccharomyces cerevisiae	28.15	2.00e-83	303.00
IUUC-Sha-106586	Sarcophilus harrisii	28.21	5.00e-85	308.00
IUUC-Sja-107868	Schizosaccharomyces japonicus	28.32	4.00e-86	311.00
IUUC-Spo-108302	Schizosaccharomyces pombe	29.45	2.00e-84	306.00
IUUC-Smo-108861	Selaginella moellendorffii	49.48	0.00e+00	792.00
IUUC-Sit-109915	Setaria italica	91.07	0.00e+00	1567.00
IUUC-Sly-111714	Solanum lycopersicum	63.13	0.00e+00	1090.00
IUUC-Stu-112631	Solanum tuberosum	63.08	0.00e+00	1101.00
IUUC-Sar-113200	Sorex araneus	34.03	6.00e-100	357.00
IUUC-Sre-115001	Sporisorium reilianum	26.61	5.00e-41	162.00
IUUC-Ssc-115519	Sus scrofa	35.92	4.00e-133	468.00
IUUC-Tgu-116987	Taeniopygia guttata	36.28	6.00e-129	454.00
IUUC-Tru-118476	Takifugu rubripes	36.73	1.00e-128	453.00
IUUC-Tsy-119230	Tarsius syrichta	36.64	2.00e-46	180.00
IUUC-Tni-120448	Tetraodon nigroviridis	27.64	1.00e-60	227.00
IUUC-Tca-121650	Theobroma cacao	65.46	0.00e+00	1139.00
IUUC-Tre-122086	Trichoderma reesei	31.78	2.00e-93	336.00
IUUC-Tvi-122397	Trichoderma virens	30.92	1.00e-84	306.00
IUUC-Tae-125778	Triticum aestivum	84.00	0.00e+00	1438.00
IUUC-Tur-126578	Triticum urartu	84.54	0.00e+00	1422.00
IUUC-Tme-126927	Tuber melanosporum	30.52	3.00e-93	335.00
IUUC-Tbe-127922	Tupaia belangeri	43.95	2.00e-44	173.00
IUUC-Ttr-128918	Tursiops truncatus	35.64	1.00e-128	452.00
IUUC-Uma-129474	Ustilago maydis	26.92	1.00e-44	174.00
IUUC-Vda-129944	Verticillium dahliae	30.69	1.00e-85	310.00
IUUC-Vpa-130693	Vicugna pacos	38.11	9.00e-124	436.00
IUUC-Vvi-130949	Vitis vinifera	65.11	0.00e+00	1132.00
IUUC-Xtr-132639	Xenopus tropicalis	34.30	2.00e-127	449.00
IUUC-Xma-134223	Xiphophorus maculatus	38.78	2.00e-85	308.00
IUUC-Yli-134601	Yarrowia lipolytica	30.97	2.00e-92	332.00
IUUC-Zma-135952	Zea mays	93.06	0.00e+00	1620.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence