iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107657

Ensembl Protein ID

EEB05295

UniProt Accession

B6JV94; B6JV94_SCHJY

Genbank Protein ID

EEB05295.1

Protein Name

RAVE complex subunit Rav1

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_00301

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_00301	EEB05295	EEB05295

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-06	24.7	188	225

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf........sd..tllvsGsdDgtikvWD 29
           H+++v  l++        ++   +l++ s Dg++++W+
   Q: 188  HSSPVAFLQWnaplmaeeNEesMYLATVSSDGVLHIWR 225
           999999999999999999445588*************9 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MPLVRSSLGR LRASPELRSF TNCFETTVFA LCEEKIVILC SKDFLPFQTI ELDQSVTSVS 60
LCKQTGWLAI GSHGVVHIYR PEEPNKYTQV NSYKFKKDCH VTCLDWGLSH DLVVSHGNTI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGACTTCTCC CAAATACACA TTCTCTACTC GTTAGCAGCG CTACTCTGCT GCGTGGTATT 60
CTTGCAGTAA ACATTGGTTT TCCTGGATGC CATTGGTACG CTCCAGCCTG GGAAGACTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF12234--Rav1p_C

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0010008--C:endosome membrane
GO:0005634--C:nucleus
GO:0043291--C:RAVE complex
GO:0071277--P:cellular response to calcium ion
GO:0071294--P:cellular response to zinc ion
GO:0007035--P:vacuolar acidification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001368	Ailuropoda melanoleuca	28.57	3.00e-26	114.00
IUUC-Apl-003377	Anas platyrhynchos	30.59	5.00e-27	116.00
IUUC-Aca-004649	Anolis carolinensis	27.90	3.00e-25	110.00
IUUC-Aly-006404	Arabidopsis lyrata	35.48	5.00e-25	109.00
IUUC-Ath-006612	Arabidopsis thaliana	28.71	2.00e-25	110.00
IUUC-Afu-009077	Aspergillus fumigatus	27.41	6.00e-121	427.00
IUUC-Ani-009437	Aspergillus nidulans	28.87	2.00e-130	458.00
IUUC-Ang-009742	Aspergillus niger	28.96	2.00e-128	451.00
IUUC-Ame-010919	Astyanax mexicanus	29.69	5.00e-27	115.00
IUUC-Bta-013088	Bos taurus	29.32	2.00e-26	114.00
IUUC-Bol-016375	Brassica oleracea	28.57	1.00e-23	104.00
IUUC-Bra-016630	Brassica rapa	28.57	1.00e-23	104.00
IUUC-Cel-018537	Caenorhabditis elegans	30.08	7.00e-25	109.00
IUUC-Cja-019137	Callithrix jacchus	28.41	2.00e-25	110.00
IUUC-Cfa-021215	Canis familiaris	29.18	9.00e-27	115.00
IUUC-Cpo-022333	Cavia porcellus	28.02	6.00e-24	105.00
IUUC-Csa-023151	Chlorocebus sabaeus	28.41	9.00e-27	115.00
IUUC-Cho-024762	Choloepus hoffmanni	28.48	1.00e-24	108.00
IUUC-Csv-026055	Ciona savignyi	30.49	1.00e-24	108.00
IUUC-Dre-028673	Danio rerio	27.80	2.00e-26	114.00
IUUC-Dno-029601	Dasypus novemcinctus	34.23	3.00e-25	110.00
IUUC-Dor-030381	Dipodomys ordii	27.90	4.00e-26	113.00
IUUC-Dme-031825	Drosophila melanogaster	30.28	2.00e-30	127.00
IUUC-Ete-033176	Echinops telfairi	29.17	3.00e-21	97.10
IUUC-Eca-033386	Equus caballus	26.86	9.00e-23	102.00
IUUC-Eeu-035011	Erinaceus europaeus	28.38	4.00e-24	106.00
IUUC-Fca-035735	Felis catus	28.11	8.00e-26	112.00
IUUC-Fal-036643	Ficedula albicollis	30.60	2.00e-25	111.00
IUUC-Gmo-038514	Gadus morhua	31.32	6.00e-26	112.00
IUUC-Gga-040693	Gallus gallus	28.26	2.00e-27	116.00
IUUC-Gac-042017	Gasterosteus aculeatus	27.56	9.00e-26	112.00
IUUC-Gma-044099	Glycine max	33.85	1.00e-24	107.00
IUUC-Ggo-044811	Gorilla gorilla	27.68	2.00e-25	110.00
IUUC-Hsa-045950	Homo sapiens	27.68	2.00e-25	110.00
IUUC-Itr-047982	Ictidomys tridecemlineatus	29.13	1.00e-22	101.00
IUUC-Lch-049469	Latimeria chalumnae	29.72	5.00e-27	116.00
IUUC-Lpe-051382	Leersia perrieri	30.15	6.00e-26	112.00
IUUC-Loc-052786	Lepisosteus oculatus	26.29	1.00e-26	115.00
IUUC-Laf-054195	Loxodonta africana	28.83	2.00e-26	114.00
IUUC-Mcc-055646	Macaca mulatta	28.41	1.00e-26	115.00
IUUC-Meu-056627	Macropus eugenii	23.02	1.00e-17	85.50
IUUC-Mtr-058725	Medicago truncatula	32.03	2.00e-24	107.00
IUUC-Mga-059386	Meleagris gallopavo	26.26	3.00e-25	110.00
IUUC-Mmr-060784	Microcebus murinus	28.47	2.00e-26	114.00
IUUC-Mdo-062914	Monodelphis domestica	28.98	8.00e-25	108.00
IUUC-Mmu-063808	Mus musculus	27.82	1.00e-25	111.00
IUUC-Mac-065224	Musa acuminata	23.56	8.00e-20	92.00
IUUC-Mpu-066054	Mustela putorius furo	27.10	6.00e-23	102.00
IUUC-Mlu-067458	Myotis lucifugus	28.41	4.00e-26	113.00
IUUC-Nfi-068420	Neosartorya fischeri	28.28	2.00e-129	455.00
IUUC-Nle-070123	Nomascus leucogenys	27.68	3.00e-25	110.00
IUUC-Ont-071658	Oreochromis niloticus	30.08	1.00e-27	118.00
IUUC-Ocu-074048	Oryctolagus cuniculus	27.60	4.00e-25	110.00
IUUC-Oba-075826	Oryza barthii	25.51	1.00e-29	124.00
IUUC-Obr-076145	Oryza brachyantha	25.88	2.00e-25	110.00
IUUC-Ogu-078307	Oryza glumaepatula	25.06	1.00e-28	121.00
IUUC-Oin-080118	Oryza indica	25.28	7.00e-29	122.00
IUUC-Olo-080848	Oryza longistaminata	25.28	1.00e-28	120.00
IUUC-Oni-082792	Oryza nivara	25.51	2.00e-29	124.00
IUUC-Opu-084153	Oryza punctata	26.50	7.00e-29	122.00
IUUC-Oru-084415	Oryza rufipogon	25.28	1.00e-28	121.00
IUUC-Ola-087560	Oryzias latipes	30.92	3.00e-24	107.00
IUUC-Oga-088816	Otolemur garnettii	28.11	7.00e-26	112.00
IUUC-Oar-089618	Ovis aries	29.70	5.00e-27	116.00
IUUC-Ptr-090937	Pan troglodytes	27.68	2.00e-25	110.00
IUUC-Pan-092151	Papio anubis	28.41	9.00e-27	115.00
IUUC-Psi-093590	Pelodiscus sinensis	28.75	8.00e-28	119.00
IUUC-Ppa-095505	Physcomitrella patens	24.35	6.00e-32	132.00
IUUC-Pfo-097445	Poecilia formosa	28.95	3.00e-26	114.00
IUUC-Pab-098237	Pongo abelii	27.31	4.00e-25	109.00
IUUC-Pop-098812	Populus trichocarpa	22.65	5.00e-23	102.00
IUUC-Pca-101008	Procavia capensis	28.04	5.00e-25	109.00
IUUC-Ppe-101610	Prunus persica	25.43	6.00e-25	109.00
IUUC-Pva-102348	Pteropus vampyrus	28.47	1.00e-26	114.00
IUUC-Rno-105076	Rattus norvegicus	27.82	1.00e-25	111.00
IUUC-Sha-106860	Sarcophilus harrisii	29.78	2.00e-26	114.00
IUUC-Sit-109981	Setaria italica	38.46	8.00e-16	77.80
IUUC-Sly-110968	Solanum lycopersicum	32.84	6.00e-23	102.00
IUUC-Sar-113751	Sorex araneus	33.15	4.00e-21	96.70
IUUC-Ssc-116371	Sus scrofa	29.52	3.00e-26	113.00
IUUC-Tgu-117108	Taeniopygia guttata	28.90	1.00e-26	114.00
IUUC-Tru-117628	Takifugu rubripes	30.23	5.00e-27	116.00
IUUC-Tsy-118837	Tarsius syrichta	30.74	1.00e-27	118.00
IUUC-Tni-120709	Tetraodon nigroviridis	27.70	5.00e-26	112.00
IUUC-Tca-121789	Theobroma cacao	26.54	3.00e-24	107.00
IUUC-Tae-125726	Triticum aestivum	26.74	1.00e-23	104.00
IUUC-Tbe-127760	Tupaia belangeri	26.75	2.00e-23	104.00
IUUC-Ttr-128991	Tursiops truncatus	29.39	1.00e-25	112.00
IUUC-Vpa-130309	Vicugna pacos	29.54	2.00e-26	114.00
IUUC-Vvi-131584	Vitis vinifera	27.70	9.00e-25	108.00
IUUC-Xtr-132638	Xenopus tropicalis	30.47	3.00e-26	113.00
IUUC-Xma-134109	Xiphophorus maculatus	26.84	2.00e-27	118.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence