iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093815

Ensembl Protein ID

ENSPSIP00000010113.1

UniProt Accession

K7FQ03; K7FQ03_PELSI

Genbank Protein ID

ENSPSIP00000010113

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01167995

Gene Name

DDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000009124.1	ENSPSIT00000010164.1	ENSPSIP00000010113.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-09	37.1	262	298

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           H+ +vt ++f    d+ll+++s D t+k+WDlr  ++
   Q: 262  HKKKVTHVEFnsrCDWLLATASVDQTVKIWDLRNIKD 298
           8899*******9766*****************97665 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MTPENQSKDK MHARVHEHHL EENAQSTWKR KRDHEELENE PQAKRLFLRK AAKPPGKIGW 60
AEGGSLFRNT GVHFHQMERQ CSIIHYIYQN MLGGSIRAQL RQCLQLPFVR SLSSYRLFRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAAGGCAGA CAGAATGACA CCTGAGAACC AATCAAAAGA CAAGATGCAT GCGAGGGTGC 60
ATGAGCATCA TCTGGAAGAA AATGCACAGT CAACTTGGAA GAGGAAACGA GACCATGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	30.56	1.00e-34	140.00
IUUC-Aml-002203	Ailuropoda melanoleuca	57.00	4.00e-134	470.00
IUUC-Atr-002957	Amborella trichopoda	34.32	8.00e-40	157.00
IUUC-Apl-003832	Anas platyrhynchos	81.89	0.00e+00	823.00
IUUC-Aca-004358	Anolis carolinensis	78.38	0.00e+00	789.00
IUUC-Aly-006296	Arabidopsis lyrata	33.33	1.00e-39	157.00
IUUC-Ath-007115	Arabidopsis thaliana	33.53	8.00e-41	161.00
IUUC-Ame-010817	Astyanax mexicanus	62.30	2.00e-143	502.00
IUUC-Bta-012914	Bos taurus	54.74	1.00e-131	462.00
IUUC-Bdi-014261	Brachypodium distachyon	30.34	4.00e-34	139.00
IUUC-Bol-015317	Brassica oleracea	34.04	7.00e-40	158.00
IUUC-Bra-016848	Brassica rapa	34.04	2.00e-39	156.00
IUUC-Cja-018967	Callithrix jacchus	58.42	4.00e-130	457.00
IUUC-Cfa-021238	Canis familiaris	57.22	2.00e-124	438.00
IUUC-Cpo-022063	Cavia porcellus	59.23	1.00e-129	455.00
IUUC-Csa-023382	Chlorocebus sabaeus	54.98	4.00e-132	464.00
IUUC-Cho-024805	Choloepus hoffmanni	43.83	8.00e-51	193.00
IUUC-Dre-028732	Danio rerio	66.85	1.00e-151	529.00
IUUC-Dor-030461	Dipodomys ordii	67.26	1.00e-92	332.00
IUUC-Ete-033038	Echinops telfairi	51.90	1.00e-124	439.00
IUUC-Eca-033772	Equus caballus	58.67	3.00e-126	444.00
IUUC-Eeu-034662	Erinaceus europaeus	50.89	5.00e-31	128.00
IUUC-Fca-036095	Felis catus	59.40	9.00e-125	439.00
IUUC-Gmo-039683	Gadus morhua	59.24	1.00e-148	519.00
IUUC-Gga-040530	Gallus gallus	82.28	0.00e+00	826.00
IUUC-Gac-041517	Gasterosteus aculeatus	64.69	5.00e-141	493.00
IUUC-Gma-043378	Glycine max	32.50	1.00e-39	157.00
IUUC-Ggo-045364	Gorilla gorilla	55.69	5.00e-134	470.00
IUUC-Hsa-046354	Homo sapiens	55.69	5.00e-134	470.00
IUUC-Hvu-047151	Hordeum vulgare	31.63	3.00e-27	115.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	54.44	1.00e-129	456.00
IUUC-Lpe-051256	Leersia perrieri	32.88	9.00e-35	141.00
IUUC-Loc-052398	Lepisosteus oculatus	61.58	6.00e-151	526.00
IUUC-Laf-053562	Loxodonta africana	55.76	3.00e-128	451.00
IUUC-Mcc-055197	Macaca mulatta	60.14	4.00e-103	367.00
IUUC-Meu-056151	Macropus eugenii	63.25	2.00e-103	368.00
IUUC-Mtr-057940	Medicago truncatula	31.50	9.00e-41	160.00
IUUC-Mga-059923	Meleagris gallopavo	81.10	0.00e+00	840.00
IUUC-Mmr-061465	Microcebus murinus	62.06	1.00e-103	369.00
IUUC-Mdo-063063	Monodelphis domestica	62.32	2.00e-149	521.00
IUUC-Mmu-064294	Mus musculus	57.34	5.00e-126	443.00
IUUC-Mac-065598	Musa acuminata	32.06	6.00e-33	135.00
IUUC-Mpu-066831	Mustela putorius furo	56.25	9.00e-129	452.00
IUUC-Mlu-067222	Myotis lucifugus	55.13	2.00e-128	451.00
IUUC-Nle-069581	Nomascus leucogenys	54.98	7.00e-133	466.00
IUUC-Opr-070644	Ochotona princeps	53.41	5.00e-127	447.00
IUUC-Ont-072605	Oreochromis niloticus	63.09	1.00e-135	476.00
IUUC-Oan-072973	Ornithorhynchus anatinus	70.34	2.00e-146	511.00
IUUC-Ocu-074615	Oryctolagus cuniculus	52.84	1.00e-128	452.00
IUUC-Oba-075283	Oryza barthii	30.17	9.00e-34	137.00
IUUC-Obr-076605	Oryza brachyantha	30.84	2.00e-35	143.00
IUUC-Ogl-077512	Oryza glaberrima	30.17	1.00e-33	137.00
IUUC-Ogu-078329	Oryza glumaepatula	30.17	8.00e-34	138.00
IUUC-Oin-079980	Oryza indica	30.17	1.00e-33	137.00
IUUC-Olo-080516	Oryza longistaminata	30.46	2.00e-33	136.00
IUUC-Ome-081415	Oryza meridionalis	30.17	1.00e-33	137.00
IUUC-Oni-082985	Oryza nivara	30.17	1.00e-33	137.00
IUUC-Opu-084159	Oryza punctata	33.03	3.00e-34	139.00
IUUC-Oru-085137	Oryza rufipogon	30.17	7.00e-34	138.00
IUUC-Osa-085614	Oryza sativa	30.17	6.00e-34	138.00
IUUC-Ola-087044	Oryzias latipes	59.35	5.00e-140	490.00
IUUC-Oga-088274	Otolemur garnettii	56.24	6.00e-135	473.00
IUUC-Oar-089826	Ovis aries	54.50	3.00e-132	464.00
IUUC-Ptr-091631	Pan troglodytes	55.69	5.00e-134	470.00
IUUC-Pan-092535	Papio anubis	54.98	5.00e-133	467.00
IUUC-Pma-094474	Petromyzon marinus	54.52	1.00e-117	415.00
IUUC-Ppa-095414	Physcomitrella patens	31.66	4.00e-34	139.00
IUUC-Pfo-096559	Poecilia formosa	64.19	6.00e-143	500.00
IUUC-Pab-098528	Pongo abelii	55.58	1.00e-132	465.00
IUUC-Pop-100064	Populus trichocarpa	32.56	7.00e-39	155.00
IUUC-Pca-100803	Procavia capensis	54.65	6.00e-126	443.00
IUUC-Ppe-101966	Prunus persica	32.83	2.00e-38	153.00
IUUC-Pva-103213	Pteropus vampyrus	55.69	6.00e-127	447.00
IUUC-Rno-105087	Rattus norvegicus	53.00	7.00e-126	443.00
IUUC-Sha-107466	Sarcophilus harrisii	64.91	6.00e-145	506.00
IUUC-Smo-108958	Selaginella moellendorffii	31.37	4.00e-33	135.00
IUUC-Sit-109968	Setaria italica	29.92	3.00e-32	133.00
IUUC-Sly-111495	Solanum lycopersicum	33.74	2.00e-36	147.00
IUUC-Sar-113272	Sorex araneus	57.80	3.00e-120	424.00
IUUC-Sbi-114706	Sorghum bicolor	27.52	8.00e-29	121.00
IUUC-Ssc-115437	Sus scrofa	54.74	5.00e-127	447.00
IUUC-Tgu-116602	Taeniopygia guttata	79.26	0.00e+00	737.00
IUUC-Tru-118698	Takifugu rubripes	62.97	1.00e-129	456.00
IUUC-Tsy-119027	Tarsius syrichta	53.33	9.00e-112	396.00
IUUC-Tni-119787	Tetraodon nigroviridis	62.95	1.00e-137	483.00
IUUC-Tca-121447	Theobroma cacao	31.45	1.00e-38	154.00
IUUC-Tae-123253	Triticum aestivum	31.30	7.00e-36	145.00
IUUC-Tur-126724	Triticum urartu	30.18	2.00e-34	140.00
IUUC-Tbe-127680	Tupaia belangeri	58.66	5.00e-94	337.00
IUUC-Ttr-128201	Tursiops truncatus	47.51	1.00e-104	372.00
IUUC-Vpa-130451	Vicugna pacos	46.76	8.00e-28	117.00
IUUC-Vvi-131001	Vitis vinifera	36.15	3.00e-44	172.00
IUUC-Xtr-132266	Xenopus tropicalis	59.75	3.00e-162	564.00
IUUC-Xma-133034	Xiphophorus maculatus	61.16	7.00e-132	463.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence