iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116213

Ensembl Protein ID

ENSSSCP00000004892.2

UniProt Accession

F1S1X8; F1S1X8_PIG

Genbank Protein ID

ENSSSCP00000004892

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU914274

Gene Name

WDR7

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000004538.2	ENSSSCT00000005012.2	ENSSSCP00000004892.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-23	82.3	62	102

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt+s+tcl+     sd  ++vs+s  g + +WD+ +g+++
   Q: 62   GHTASITCLSKacasSDkQYIVSASESGEMCLWDVNDGRCI 102
           8*******9434699999*********************97 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAGNSLVLPI VLWGRKAPTH CISAVLLTDD GATIVTGCHD GQICLWDLSV DLEVNPRALL 60
FGHTASITCL SKACASSDKQ YIVSASESGE MCLWDVNDGR CIEFTKLACT HTGIQFYQFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCAGTTGG CTGGAGTCAG CTGATTTACT GCAGCGGCGG CGGCGGCGGT GGCAACGGCA 60
TCTTGCATCC TCTGTGGAGA GACAGAGGTT GGGCTGGGGT TGCGATCCAA AGTTTTCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0002244--P:hematopoietic progenitor cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000634	Aegilops tauschii	26.00	1.00e-14	75.10
IUUC-Aml-001481	Ailuropoda melanoleuca	94.51	0.00e+00	1924.00
IUUC-Atr-002981	Amborella trichopoda	26.09	6.00e-09	57.00
IUUC-Apl-003943	Anas platyrhynchos	84.83	0.00e+00	1722.00
IUUC-Aca-005145	Anolis carolinensis	84.33	0.00e+00	1729.00
IUUC-Aly-005882	Arabidopsis lyrata	21.66	3.00e-10	61.20
IUUC-Ath-006797	Arabidopsis thaliana	21.53	2.00e-09	58.50
IUUC-Ame-011180	Astyanax mexicanus	73.23	0.00e+00	1506.00
IUUC-Bta-012912	Bos taurus	92.94	0.00e+00	1914.00
IUUC-Bra-018098	Brassica rapa	23.08	7.00e-11	62.80
IUUC-Cel-018565	Caenorhabditis elegans	43.04	3.00e-53	204.00
IUUC-Cja-019970	Callithrix jacchus	91.43	0.00e+00	1748.00
IUUC-Cfa-020677	Canis familiaris	94.31	0.00e+00	1921.00
IUUC-Cpo-021408	Cavia porcellus	93.74	0.00e+00	1914.00
IUUC-Csa-023786	Chlorocebus sabaeus	94.51	0.00e+00	1923.00
IUUC-Cho-024612	Choloepus hoffmanni	92.46	0.00e+00	1016.00
IUUC-Cin-025255	Ciona intestinalis	39.27	0.00e+00	688.00
IUUC-Csv-026361	Ciona savignyi	38.26	0.00e+00	658.00
IUUC-Dre-027951	Danio rerio	80.34	0.00e+00	1027.00
IUUC-Dno-029072	Dasypus novemcinctus	92.88	0.00e+00	1912.00
IUUC-Dor-030771	Dipodomys ordii	88.35	0.00e+00	1459.00
IUUC-Dme-031768	Drosophila melanogaster	41.11	0.00e+00	768.00
IUUC-Ete-032492	Echinops telfairi	82.24	0.00e+00	1618.00
IUUC-Eca-033496	Equus caballus	94.41	0.00e+00	1924.00
IUUC-Eeu-034689	Erinaceus europaeus	81.02	0.00e+00	678.00
IUUC-Fca-035530	Felis catus	94.22	0.00e+00	1924.00
IUUC-Fal-037238	Ficedula albicollis	81.28	0.00e+00	1584.00
IUUC-Gmo-039528	Gadus morhua	71.96	0.00e+00	1437.00
IUUC-Gga-041043	Gallus gallus	88.86	0.00e+00	1791.00
IUUC-Gac-042524	Gasterosteus aculeatus	73.74	0.00e+00	1501.00
IUUC-Gma-044326	Glycine max	26.54	6.00e-10	60.50
IUUC-Ggo-045112	Gorilla gorilla	94.13	0.00e+00	1915.00
IUUC-Hsa-046732	Homo sapiens	94.31	0.00e+00	1921.00
IUUC-Itr-048340	Ictidomys tridecemlineatus	97.64	0.00e+00	952.00
IUUC-Lch-050643	Latimeria chalumnae	82.22	0.00e+00	1604.00
IUUC-Lpe-051544	Leersia perrieri	25.74	8.00e-12	66.60
IUUC-Loc-051774	Lepisosteus oculatus	73.55	0.00e+00	1414.00
IUUC-Laf-054349	Loxodonta africana	92.56	0.00e+00	1873.00
IUUC-Mcc-055800	Macaca mulatta	94.51	0.00e+00	1926.00
IUUC-Meu-056091	Macropus eugenii	88.09	0.00e+00	904.00
IUUC-Mtr-058676	Medicago truncatula	22.03	5.00e-14	73.90
IUUC-Mga-060096	Meleagris gallopavo	66.84	0.00e+00	1186.00
IUUC-Mmr-061271	Microcebus murinus	94.12	0.00e+00	1915.00
IUUC-Mdo-062622	Monodelphis domestica	89.22	0.00e+00	1818.00
IUUC-Mmu-063262	Mus musculus	91.76	0.00e+00	1877.00
IUUC-Mac-065659	Musa acuminata	25.61	2.00e-09	58.50
IUUC-Mpu-066523	Mustela putorius furo	94.69	0.00e+00	1917.00
IUUC-Mlu-067288	Myotis lucifugus	91.61	0.00e+00	1873.00
IUUC-Nle-069610	Nomascus leucogenys	97.26	0.00e+00	1937.00
IUUC-Opr-070413	Ochotona princeps	95.25	0.00e+00	1187.00
IUUC-Ont-072199	Oreochromis niloticus	73.93	0.00e+00	1495.00
IUUC-Oan-073095	Ornithorhynchus anatinus	90.07	0.00e+00	1851.00
IUUC-Ocu-074257	Oryctolagus cuniculus	93.82	0.00e+00	1916.00
IUUC-Oba-075713	Oryza barthii	26.73	1.00e-12	69.30
IUUC-Obr-076894	Oryza brachyantha	26.29	2.00e-11	65.50
IUUC-Ogl-077521	Oryza glaberrima	26.73	1.00e-12	69.30
IUUC-Ogu-078103	Oryza glumaepatula	26.73	3.00e-12	67.80
IUUC-Oin-080169	Oryza indica	26.73	1.00e-12	69.70
IUUC-Olo-080818	Oryza longistaminata	22.22	1.00e-15	79.00
IUUC-Ome-081902	Oryza meridionalis	26.73	1.00e-12	69.30
IUUC-Oni-082333	Oryza nivara	27.14	2.00e-12	68.90
IUUC-Opu-083952	Oryza punctata	27.23	9.00e-13	69.70
IUUC-Oru-085112	Oryza rufipogon	26.73	1.00e-12	68.90
IUUC-Osa-085615	Oryza sativa	22.43	2.00e-15	77.00
IUUC-Ola-087177	Oryzias latipes	73.05	0.00e+00	1459.00
IUUC-Oga-088290	Otolemur garnettii	92.84	0.00e+00	1884.00
IUUC-Oar-089575	Ovis aries	96.75	0.00e+00	1941.00
IUUC-Ptr-091041	Pan troglodytes	94.51	0.00e+00	1925.00
IUUC-Pan-092048	Papio anubis	94.61	0.00e+00	1927.00
IUUC-Psi-093637	Pelodiscus sinensis	87.23	0.00e+00	1800.00
IUUC-Pma-094714	Petromyzon marinus	63.66	0.00e+00	1087.00
IUUC-Pfo-096529	Poecilia formosa	76.29	0.00e+00	1518.00
IUUC-Pab-098194	Pongo abelii	94.61	0.00e+00	1927.00
IUUC-Pop-099546	Populus trichocarpa	21.66	5.00e-12	67.40
IUUC-Pca-100950	Procavia capensis	87.08	2.00e-166	580.00
IUUC-Ppe-101653	Prunus persica	27.81	6.00e-09	57.00
IUUC-Pva-102803	Pteropus vampyrus	92.56	0.00e+00	1881.00
IUUC-Rno-105904	Rattus norvegicus	91.45	0.00e+00	1863.00
IUUC-Sha-106926	Sarcophilus harrisii	70.31	0.00e+00	1352.00
IUUC-Smo-109304	Selaginella moellendorffii	23.26	1.00e-22	102.00
IUUC-Sit-110049	Setaria italica	26.51	1.00e-11	65.10
IUUC-Sly-111516	Solanum lycopersicum	20.82	7.00e-12	66.60
IUUC-Stu-111982	Solanum tuberosum	20.53	7.00e-11	63.50
IUUC-Sar-113730	Sorex araneus	91.85	0.00e+00	1637.00
IUUC-Sbi-114887	Sorghum bicolor	23.01	7.00e-14	72.80
IUUC-Tgu-117297	Taeniopygia guttata	84.66	0.00e+00	1745.00
IUUC-Tru-117887	Takifugu rubripes	74.39	0.00e+00	1489.00
IUUC-Tsy-118970	Tarsius syrichta	87.83	0.00e+00	1732.00
IUUC-Tni-119791	Tetraodon nigroviridis	78.00	0.00e+00	1047.00
IUUC-Tca-121391	Theobroma cacao	21.31	1.00e-14	75.90
IUUC-Tae-123628	Triticum aestivum	28.16	9.00e-16	79.70
IUUC-Tur-125959	Triticum urartu	28.16	5.00e-16	79.30
IUUC-Tbe-127847	Tupaia belangeri	89.26	0.00e+00	926.00
IUUC-Ttr-128200	Tursiops truncatus	89.21	0.00e+00	1771.00
IUUC-Vpa-130178	Vicugna pacos	94.21	0.00e+00	1925.00
IUUC-Xtr-132699	Xenopus tropicalis	83.07	0.00e+00	1721.00
IUUC-Xma-133180	Xiphophorus maculatus	76.74	0.00e+00	1431.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence