iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Fca-035707

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AANG02178409

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFCAG00000030222.1	ENSFCAT00000025900.1	ENSFCAP00000020281.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-33	112.0	112	148
UBD/Beta-Prp	2.50e-52	177.9	106	299

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH+  v++++f  +dt l+sGs+Dgt+k+WD  +g +
   Q: 112  GHSHIVSSCNFcvDDTKLLSGSYDGTVKLWDAVDGSV 148
           8***********777****************988876 PP

UBD/Beta-Prp

   S: 86   cvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
           ++ ++kgh++ v s++f+ ++ kl+sGs d t+++wd   g+++++++   ++ v   +v  d++ ++++s+D++vr Wdl+tgkll +
   Q: 106  PFKIMKGHSHIVSSCNFCVDDTKLLSGSYDGTVKLWDAVDGSVIRDFEHRPNAPVLECSVTADSKRIIAASYDKAVRAWDLETGKLLWK 194
           57899*****************************************9999999***9*****9************************88 PP
   S: 175  ltgghtdsvyslsfdsngkelvsg.sldgtvklwdlqtgecvrtlng.htdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlq 261
              +h+  + s +++++gk++vs+ + d+ + + d ++ ++v   ++ h++  +   f+p+++ ++s+s D+si+iWd++s+ +l t++
   Q: 195  I--NHETFIASCKLSPDGKYVVSAlDVDRGICITDAENATTVSHIKNhHSRSLTACCFDPDSQKVASVSLDKSIKIWDITSQATLLTIT 281
           8..6******************97578**********9998888888366788888999****************************** PP
   S: 262  lhnssvisvavlsfgdnv 279
           + +ss is +++ f+ nv
   Q: 282  KAHSSAISNCCFTFSWNV 299
           ***999999997776554 PP

Organism

Felis catus

Protein Sequence
(Fasta)

MASEPPCAPG SPEAPDKGKK TVSQQCEVQP PLVHSGDIEH PPQKLHRAAL VRGYGRFHLS 60
IVEARQAQLL SRLDPLEVGK RSLPSEKHPM PEEKFWGDQE SLSKIPFKIM KGHSHIVSSC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGCGCAGG CGCGTGGCGC CACCGTTCGT TCGTGGCCTG GCCGGGGTGC TGGGTGTCGG 60
CAAACCAGCG GTTGGGGCTC TGAGATGGCC TCGGAGCCAC CCTGCGCCCC CGGCTCCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR018391--PQQ_beta_propeller_repeat
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00564--PQQ
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	88.29	8.00e-162	562.00
IUUC-Apl-003571	Anas platyrhynchos	54.02	6.00e-114	403.00
IUUC-Aca-005232	Anolis carolinensis	46.85	4.00e-68	250.00
IUUC-Ame-011833	Astyanax mexicanus	48.45	7.00e-44	169.00
IUUC-Bta-013562	Bos taurus	69.87	2.00e-170	592.00
IUUC-Cja-019202	Callithrix jacchus	68.60	5.00e-179	620.00
IUUC-Cfa-021095	Canis familiaris	77.97	0.00e+00	705.00
IUUC-Cpo-022170	Cavia porcellus	70.87	4.00e-169	587.00
IUUC-Csa-024218	Chlorocebus sabaeus	73.75	0.00e+00	628.00
IUUC-Cho-024561	Choloepus hoffmanni	71.91	1.00e-112	399.00
IUUC-Dno-029722	Dasypus novemcinctus	71.35	8.00e-144	503.00
IUUC-Dor-030464	Dipodomys ordii	62.11	3.00e-119	421.00
IUUC-Ete-032931	Echinops telfairi	60.88	2.00e-105	375.00
IUUC-Eca-034428	Equus caballus	80.62	3.00e-170	590.00
IUUC-Eeu-034568	Erinaceus europaeus	57.99	7.00e-106	377.00
IUUC-Gmo-039646	Gadus morhua	42.12	3.00e-65	241.00
IUUC-Gga-040710	Gallus gallus	52.29	4.00e-103	367.00
IUUC-Ggo-044611	Gorilla gorilla	48.55	3.00e-103	368.00
IUUC-Hsa-046138	Homo sapiens	68.40	0.00e+00	635.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	60.96	1.00e-153	535.00
IUUC-Lch-050329	Latimeria chalumnae	47.01	4.00e-95	341.00
IUUC-Loc-052876	Lepisosteus oculatus	38.51	6.00e-34	136.00
IUUC-Laf-053777	Loxodonta africana	75.00	2.00e-179	621.00
IUUC-Mcc-055771	Macaca mulatta	73.03	2.00e-180	624.00
IUUC-Meu-056584	Macropus eugenii	42.81	2.00e-69	255.00
IUUC-Mga-059818	Meleagris gallopavo	51.97	2.00e-111	395.00
IUUC-Mmr-060639	Microcebus murinus	72.13	1.00e-149	522.00
IUUC-Mdo-062321	Monodelphis domestica	53.02	5.00e-123	434.00
IUUC-Mpu-066849	Mustela putorius furo	81.28	0.00e+00	653.00
IUUC-Mlu-067238	Myotis lucifugus	72.57	1.00e-176	612.00
IUUC-Ont-071230	Oreochromis niloticus	39.67	5.00e-69	254.00
IUUC-Oan-072698	Ornithorhynchus anatinus	56.17	1.00e-128	452.00
IUUC-Ocu-074219	Oryctolagus cuniculus	73.80	4.00e-162	563.00
IUUC-Oga-087913	Otolemur garnettii	66.99	5.00e-163	566.00
IUUC-Oar-089977	Ovis aries	69.11	4.00e-174	603.00
IUUC-Ptr-090876	Pan troglodytes	68.83	0.00e+00	637.00
IUUC-Pan-091936	Papio anubis	76.82	1.00e-103	369.00
IUUC-Psi-093015	Pelodiscus sinensis	48.00	3.00e-66	244.00
IUUC-Pma-094552	Petromyzon marinus	34.64	2.00e-32	131.00
IUUC-Pfo-096240	Poecilia formosa	39.94	3.00e-66	247.00
IUUC-Pab-097983	Pongo abelii	60.61	6.00e-155	540.00
IUUC-Pca-100752	Procavia capensis	58.75	4.00e-130	457.00
IUUC-Pva-102199	Pteropus vampyrus	65.36	2.00e-167	582.00
IUUC-Rno-106062	Rattus norvegicus	64.56	2.00e-156	545.00
IUUC-Sar-113167	Sorex araneus	51.80	1.00e-35	143.00
IUUC-Ssc-116089	Sus scrofa	79.49	0.00e+00	638.00
IUUC-Tbe-127860	Tupaia belangeri	59.06	7.00e-147	513.00
IUUC-Ttr-129152	Tursiops truncatus	74.09	5.00e-163	566.00
IUUC-Vpa-130745	Vicugna pacos	67.17	3.00e-171	594.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence