iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-062331

Ensembl Protein ID

ENSMODP00000012913.3

UniProt Accession

F6SSB6; F6SSB6_MONDO

Protein Name

Uncharacterized protein

Gene Name

WDR13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000010303.3	ENSMODT00000013149.3	ENSMODP00000012913.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-15	55.1	419	457

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+ +v+++a+  s++ lvs s D t+++W + +g++++
   Q: 419  GHSRGVSDFAWslSNDVLVSTSLDATMRIWATEDGRCIR 457
           8***********97799*******************987 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MLPGLQGLRR SPPTHLSTAE RRTIQPAPFW GVVRPSDPGM KERAVCPSAR HPLSTACRSL 60
ALPRAQSAAG GKVGLIFPGW EKAPGAHQPL SSPEHCSSLL LLGTRHWPLP DPSARFSCPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCTTGGGT CTGGAGAGCC CACCTGTTGC CCTCATGCTA CCTGGCCTCC AGGGCCTCAG 60
ACGTAGCCCG CCCACCCACC TGAGCACAGC AGAGAGGAGG TGAGTAAAGG GGCCGCCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0005886--C:plasma membrane
GO:1990841--F:promoter-specific chromatin binding
GO:1904691--P:negative regulation of type B pancreatic cell proliferation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	36.59	2.00e-30	126.00
IUUC-Aml-001761	Ailuropoda melanoleuca	92.18	0.00e+00	806.00
IUUC-Atr-002577	Amborella trichopoda	38.17	3.00e-53	202.00
IUUC-Aca-004423	Anolis carolinensis	91.74	0.00e+00	853.00
IUUC-Aly-005453	Arabidopsis lyrata	37.97	1.00e-51	197.00
IUUC-Ath-007256	Arabidopsis thaliana	37.66	5.00e-51	195.00
IUUC-Ame-010600	Astyanax mexicanus	80.00	0.00e+00	678.00
IUUC-Bta-013511	Bos taurus	92.16	0.00e+00	803.00
IUUC-Bdi-014322	Brachypodium distachyon	40.13	2.00e-50	192.00
IUUC-Bol-015992	Brassica oleracea	38.92	1.00e-53	203.00
IUUC-Bra-017399	Brassica rapa	38.27	1.00e-53	204.00
IUUC-Cja-019508	Callithrix jacchus	91.95	0.00e+00	803.00
IUUC-Cfa-020273	Canis familiaris	91.95	0.00e+00	801.00
IUUC-Cpo-022002	Cavia porcellus	91.31	0.00e+00	803.00
IUUC-Cre-022575	Chlamydomonas reinhardtii	26.80	2.00e-10	60.80
IUUC-Csa-023862	Chlorocebus sabaeus	92.11	0.00e+00	798.00
IUUC-Cin-025687	Ciona intestinalis	55.88	6.00e-151	526.00
IUUC-Csv-025992	Ciona savignyi	55.83	1.00e-152	533.00
IUUC-Dre-028697	Danio rerio	81.99	0.00e+00	686.00
IUUC-Dno-029208	Dasypus novemcinctus	92.16	0.00e+00	803.00
IUUC-Dor-030316	Dipodomys ordii	91.79	4.00e-94	338.00
IUUC-Eca-033362	Equus caballus	91.98	0.00e+00	717.00
IUUC-Eeu-034599	Erinaceus europaeus	78.45	1.00e-114	407.00
IUUC-Fca-035874	Felis catus	91.95	0.00e+00	802.00
IUUC-Gmo-039176	Gadus morhua	81.40	0.00e+00	683.00
IUUC-Gga-040458	Gallus gallus	81.68	2.00e-63	234.00
IUUC-Gac-041802	Gasterosteus aculeatus	81.99	0.00e+00	712.00
IUUC-Gma-043787	Glycine max	37.11	4.00e-50	192.00
IUUC-Ggo-045546	Gorilla gorilla	91.95	0.00e+00	802.00
IUUC-Hsa-046407	Homo sapiens	91.95	0.00e+00	802.00
IUUC-Hvu-047726	Hordeum vulgare	36.02	5.00e-45	175.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	92.16	0.00e+00	803.00
IUUC-Lpe-051374	Leersia perrieri	39.88	4.00e-51	195.00
IUUC-Loc-052403	Lepisosteus oculatus	75.05	0.00e+00	655.00
IUUC-Laf-053721	Loxodonta africana	91.95	0.00e+00	803.00
IUUC-Mcc-055449	Macaca mulatta	92.11	0.00e+00	798.00
IUUC-Meu-056487	Macropus eugenii	98.94	0.00e+00	897.00
IUUC-Mtr-058659	Medicago truncatula	32.76	4.00e-45	175.00
IUUC-Mmr-061406	Microcebus murinus	91.32	0.00e+00	663.00
IUUC-Mmu-064001	Mus musculus	91.95	0.00e+00	801.00
IUUC-Mac-064934	Musa acuminata	38.17	3.00e-51	196.00
IUUC-Mpu-065871	Mustela putorius furo	91.95	0.00e+00	803.00
IUUC-Mlu-067463	Myotis lucifugus	90.47	0.00e+00	780.00
IUUC-Nle-070136	Nomascus leucogenys	92.11	0.00e+00	798.00
IUUC-Opr-070913	Ochotona princeps	84.53	0.00e+00	707.00
IUUC-Ont-071347	Oreochromis niloticus	77.71	0.00e+00	756.00
IUUC-Oan-073527	Ornithorhynchus anatinus	84.43	5.00e-171	593.00
IUUC-Ocu-074829	Oryctolagus cuniculus	87.79	0.00e+00	753.00
IUUC-Oba-075666	Oryza barthii	39.25	2.00e-50	193.00
IUUC-Obr-076413	Oryza brachyantha	39.88	2.00e-51	196.00
IUUC-Ogl-076998	Oryza glaberrima	39.25	1.00e-50	193.00
IUUC-Ogu-078287	Oryza glumaepatula	39.56	4.00e-51	195.00
IUUC-Oin-079359	Oryza indica	39.25	2.00e-50	192.00
IUUC-Olo-080438	Oryza longistaminata	37.34	2.00e-30	126.00
IUUC-Ome-081328	Oryza meridionalis	39.56	1.00e-54	207.00
IUUC-Oni-082574	Oryza nivara	39.25	2.00e-50	193.00
IUUC-Opu-083376	Oryza punctata	36.76	1.00e-44	174.00
IUUC-Oru-085162	Oryza rufipogon	39.25	3.00e-50	192.00
IUUC-Osa-085507	Oryza sativa	39.25	3.00e-50	192.00
IUUC-Ola-087387	Oryzias latipes	80.30	0.00e+00	706.00
IUUC-Oga-088694	Otolemur garnettii	92.18	0.00e+00	805.00
IUUC-Oar-090355	Ovis aries	90.91	0.00e+00	788.00
IUUC-Ptr-091488	Pan troglodytes	89.76	4.00e-177	613.00
IUUC-Pan-092516	Papio anubis	92.11	0.00e+00	799.00
IUUC-Pma-094572	Petromyzon marinus	79.16	0.00e+00	756.00
IUUC-Ppa-096003	Physcomitrella patens	39.13	1.00e-39	157.00
IUUC-Pfo-096819	Poecilia formosa	78.45	0.00e+00	699.00
IUUC-Pab-098373	Pongo abelii	88.91	0.00e+00	786.00
IUUC-Pop-099930	Populus trichocarpa	39.69	5.00e-53	202.00
IUUC-Pca-100248	Procavia capensis	89.41	0.00e+00	782.00
IUUC-Ppe-101592	Prunus persica	37.42	7.00e-49	188.00
IUUC-Pva-102971	Pteropus vampyrus	91.74	0.00e+00	802.00
IUUC-Rno-105386	Rattus norvegicus	91.05	0.00e+00	660.00
IUUC-Sha-106520	Sarcophilus harrisii	96.61	0.00e+00	878.00
IUUC-Smo-108859	Selaginella moellendorffii	41.85	3.00e-56	212.00
IUUC-Sit-109987	Setaria italica	39.50	6.00e-50	191.00
IUUC-Sly-111433	Solanum lycopersicum	36.74	1.00e-50	193.00
IUUC-Stu-112677	Solanum tuberosum	36.10	2.00e-54	206.00
IUUC-Sar-113317	Sorex araneus	90.61	2.00e-138	485.00
IUUC-Sbi-114115	Sorghum bicolor	39.88	5.00e-25	108.00
IUUC-Ssc-115697	Sus scrofa	90.98	2.00e-127	447.00
IUUC-Tru-118749	Takifugu rubripes	81.01	0.00e+00	708.00
IUUC-Tni-119685	Tetraodon nigroviridis	77.36	0.00e+00	657.00
IUUC-Tca-121769	Theobroma cacao	36.99	6.00e-50	191.00
IUUC-Tae-125563	Triticum aestivum	35.45	9.00e-30	123.00
IUUC-Tur-126403	Triticum urartu	36.59	5.00e-29	121.00
IUUC-Tbe-127245	Tupaia belangeri	93.48	2.00e-110	392.00
IUUC-Ttr-128854	Tursiops truncatus	91.74	0.00e+00	828.00
IUUC-Vvi-131113	Vitis vinifera	36.79	3.00e-49	189.00
IUUC-Xtr-132420	Xenopus tropicalis	84.30	0.00e+00	711.00
IUUC-Xma-134302	Xiphophorus maculatus	81.14	0.00e+00	742.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence