iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-117607

UUCD1 version

UUC-TaR-00629

Ensembl Protein ID

ENSTRUP00000029671.1

UniProt Accession

H2TYB2; H2TYB2_TAKRU

Protein Name

Uncharacterized protein

Gene Name

rbck1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000011750.1	ENSTRUT00000029788.1	ENSTRUP00000029671.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	1.40e-09	38.9	64	122

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 7    sldgseltlk...vnpsdtVaeLKekiekklgippeqqrLiykGkiL.eddktLadyglk 62
           + ++ ++ l    v+p++t+a+LKeki++  g+pp+ qr+++ Gk L +d  tL ++g++
   Q: 64   DGQSETYVLVtavVSPHMTIAQLKEKISQDYGFPPALQRWVI-GKRLtQDQETLFSHGVR 122
           44544444445679****************************.55555**********96 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

WDVLVSGAAE ELALSLSEAL SGGDEQEAAE LSRRLSQLSL PVTVSIKSQA YPQDSIRLHI 60
GVEDGQSETY VLVTAVVSPH MTIAQLKEKI SQDYGFPPAL QRWVIGKRLT QDQETLFSHG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGGATGTCT TGGTCTCCGG CGCAGCTGAA GAGTTGGCCC TGTCCCTGAG TGAAGCCCTC 60
AGCGGCGGGG ACGAGCAGGA AGCGGCGGAA CTGAGCCGCA GGCTGTCACA GCTCTCCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR027370--Znf-RING_LisH
IPR001876--Znf_RanBP2
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50053--UBIQUITIN_2
PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00240--ubiquitin
PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0071797--C:LUBAC complex
GO:0043130--F:ubiquitin binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0048701--P:embryonic cranial skeleton morphogenesis
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0097039--P:protein linear polyubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011008	Astyanax mexicanus	56.16	6.00e-164	570.00
IUUC-Dre-027591	Danio rerio	55.88	3.00e-159	555.00
IUUC-Dor-030313	Dipodomys ordii	46.86	1.00e-120	426.00
IUUC-Ete-032908	Echinops telfairi	43.50	1.00e-107	383.00
IUUC-Eeu-034454	Erinaceus europaeus	40.86	2.00e-52	200.00
IUUC-Gac-041572	Gasterosteus aculeatus	66.13	8.00e-167	579.00
IUUC-Itr-049042	Ictidomys tridecemlineatus	51.08	5.00e-133	467.00
IUUC-Mlu-067000	Myotis lucifugus	51.36	4.00e-135	474.00
IUUC-Ont-072405	Oreochromis niloticus	70.60	0.00e+00	702.00
IUUC-Ocu-074358	Oryctolagus cuniculus	45.89	1.00e-116	413.00
IUUC-Ola-086403	Oryzias latipes	66.05	0.00e+00	646.00
IUUC-Pfo-097161	Poecilia formosa	69.10	0.00e+00	659.00
IUUC-Tni-119873	Tetraodon nigroviridis	78.70	0.00e+00	800.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence