iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114206

UUCD1 version

UUC-SoB-00831

Ensembl Protein ID

Sb04g030940.1

UniProt Accession

C5Y0F4; C5Y0F4_SORBI

Genbank Protein ID

EES07414.1; KXG30945.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763; CM000763

Gene Name

SORBI_004G271900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g030940	Sb04g030940.1	Sb04g030940.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	28.80	1.00e-24	108.00	IUUC-Sce-106260

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEIDSLREGF DRVAEKRSLS SAKALEAVDQ IVNEVEQAIV KLQMMNTDST GNVDHPSILA 60
ELKSKLNEMA PLNQLEGSQK ELNGALSKYL KVLEKSFNPD ISKAYRNVDF EVHTVNNIIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCTCGCCCT CTCACCTCGC ACGGTAAGCC ATGGTGGCTA GGGTTTCCAG CGGCACCCCT 60
CTCCTACTTG TGCGCCTCCC ATCTCCGCTC GCTCCGTCTC CAGATCTCTA ATTCGTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR013144--CRA_dom
IPR024964--CTLH/CRA
IPR006595--CTLH_C
IPR006594--LisH
IPR027370--Znf-RING_LisH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50897--CTLH
PS50896--LISH

Pfam

PF10607--CLTH
PF13445--zf-RING_UBOX

SMART

SM00757--CRA
SM00668--CTLH

Gene Ontology

GO:0005737--C:cytoplasm
GO:0034657--C:GID complex
GO:0005634--C:nucleus
GO:0046872--F:metal ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g030940

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000501	Aegilops tauschii	81.79	0.00e+00	661.00
IUUC-Aml-001548	Ailuropoda melanoleuca	36.62	1.00e-62	232.00
IUUC-Atr-003004	Amborella trichopoda	59.84	1.00e-137	482.00
IUUC-Apl-003644	Anas platyrhynchos	36.62	8.00e-63	233.00
IUUC-Aca-005137	Anolis carolinensis	36.70	2.00e-49	188.00
IUUC-Aly-005615	Arabidopsis lyrata	54.85	2.00e-114	404.00
IUUC-Ath-007247	Arabidopsis thaliana	54.45	6.00e-120	422.00
IUUC-Ago-007826	Ashbya gossypii	39.58	2.00e-19	89.00
IUUC-Acl-008282	Aspergillus clavatus	36.46	9.00e-61	226.00
IUUC-Afl-008705	Aspergillus flavus	35.95	2.00e-61	228.00
IUUC-Afu-009079	Aspergillus fumigatus	35.97	2.00e-58	219.00
IUUC-Ani-009387	Aspergillus nidulans	34.68	5.00e-59	220.00
IUUC-Ang-009525	Aspergillus niger	31.95	1.00e-35	143.00
IUUC-Aor-009954	Aspergillus oryzae	35.95	2.00e-61	229.00
IUUC-Ate-010352	Aspergillus terreus	36.62	6.00e-62	231.00
IUUC-Ame-011850	Astyanax mexicanus	37.77	2.00e-64	238.00
IUUC-Bgr-012198	Blumeria graminis	36.94	6.00e-52	197.00
IUUC-Bta-013363	Bos taurus	36.62	1.00e-62	232.00
IUUC-Bci-013985	Botrytis cinerea	38.64	1.00e-54	206.00
IUUC-Bdi-014918	Brachypodium distachyon	80.26	0.00e+00	663.00
IUUC-Bol-015549	Brassica oleracea	51.02	7.00e-106	376.00
IUUC-Bra-017752	Brassica rapa	50.51	6.00e-110	389.00
IUUC-Cel-018146	Caenorhabditis elegans	33.51	8.00e-18	84.00
IUUC-Cja-019683	Callithrix jacchus	36.62	1.00e-62	233.00
IUUC-Cfa-020186	Canis familiaris	36.62	1.00e-62	232.00
IUUC-Cpo-021863	Cavia porcellus	36.62	1.00e-62	232.00
IUUC-Cre-022621	Chlamydomonas reinhardtii	49.65	2.00e-39	153.00
IUUC-Csa-023778	Chlorocebus sabaeus	36.62	1.00e-62	232.00
IUUC-Cho-024394	Choloepus hoffmanni	28.62	6.00e-42	163.00
IUUC-Cin-025509	Ciona intestinalis	31.78	6.00e-57	213.00
IUUC-Csv-025906	Ciona savignyi	32.04	6.00e-57	213.00
IUUC-Cgl-026770	Colletotrichum gloeosporioides	33.08	8.00e-51	193.00
IUUC-Cne-026984	Cryptococcus neoformans	26.59	4.00e-26	111.00
IUUC-Cme-027169	Cyanidioschyzon merolae	33.02	2.00e-62	232.00
IUUC-Dre-027541	Danio rerio	35.56	7.00e-64	236.00
IUUC-Dno-028947	Dasypus novemcinctus	35.78	2.00e-58	218.00
IUUC-Dor-030778	Dipodomys ordii	40.00	4.00e-55	207.00
IUUC-Dse-031216	Dothistroma septosporum	32.46	1.00e-50	193.00
IUUC-Dme-032053	Drosophila melanogaster	34.34	4.00e-56	211.00
IUUC-Ete-033138	Echinops telfairi	31.50	6.00e-49	187.00
IUUC-Eca-034297	Equus caballus	36.62	1.00e-62	232.00
IUUC-Fca-035452	Felis catus	35.47	5.00e-58	217.00
IUUC-Fal-037162	Ficedula albicollis	33.42	1.00e-63	236.00
IUUC-Fox-037791	Fusarium oxysporum	30.83	5.00e-49	187.00
IUUC-Fso-038261	Fusarium solani	32.84	4.00e-53	201.00
IUUC-Gmo-038538	Gadus morhua	37.46	2.00e-63	235.00
IUUC-Ggr-039758	Gaeumannomyces graminis	31.11	3.00e-48	185.00
IUUC-Gga-040152	Gallus gallus	33.42	1.00e-63	236.00
IUUC-Gac-042375	Gasterosteus aculeatus	39.01	3.00e-66	244.00
IUUC-Gma-043473	Glycine max	60.51	3.00e-132	464.00
IUUC-Ggo-044610	Gorilla gorilla	35.47	5.00e-58	217.00
IUUC-Hsa-046828	Homo sapiens	36.62	1.00e-62	232.00
IUUC-Hvu-047623	Hordeum vulgare	81.03	0.00e+00	654.00
IUUC-Itr-048574	Ictidomys tridecemlineatus	36.62	1.00e-62	233.00
IUUC-Kpa-049125	Komagataella pastoris	30.70	4.00e-44	171.00
IUUC-Lch-049725	Latimeria chalumnae	37.12	7.00e-61	226.00
IUUC-Lpe-051452	Leersia perrieri	84.10	0.00e+00	657.00
IUUC-Loc-052201	Lepisosteus oculatus	36.92	2.00e-63	235.00
IUUC-Lma-053061	Leptosphaeria maculans	32.95	6.00e-60	224.00
IUUC-Laf-054447	Loxodonta africana	35.17	2.00e-57	215.00
IUUC-Mcc-055378	Macaca mulatta	36.62	1.00e-62	232.00
IUUC-Meu-056571	Macropus eugenii	32.11	2.00e-54	205.00
IUUC-Mor-056969	Magnaporthe oryzae	40.83	5.00e-49	187.00
IUUC-Mpo-057427	Magnaporthe poae	30.26	1.00e-47	182.00
IUUC-Mtr-058293	Medicago truncatula	56.70	1.00e-134	472.00
IUUC-Mla-059074	Melampsora laricipopulina	32.68	4.00e-47	181.00
IUUC-Mga-059978	Meleagris gallopavo	33.42	1.00e-63	236.00
IUUC-Mvi-060298	Microbotryum violaceum	29.65	1.00e-24	106.00
IUUC-Mmr-061460	Microcebus murinus	35.69	1.00e-58	219.00
IUUC-Mdo-061921	Monodelphis domestica	32.02	2.00e-55	209.00
IUUC-Mmu-063553	Mus musculus	36.62	1.00e-62	232.00
IUUC-Mac-064452	Musa acuminata	60.88	5.00e-140	489.00
IUUC-Mpu-066545	Mustela putorius furo	36.62	1.00e-62	232.00
IUUC-Mlu-067713	Myotis lucifugus	34.86	3.00e-57	214.00
IUUC-Nfi-068340	Neosartorya fischeri	34.79	9.00e-57	213.00
IUUC-Ncr-068889	Neurospora crassa	39.84	2.00e-49	189.00
IUUC-Nle-069876	Nomascus leucogenys	32.49	3.00e-58	218.00
IUUC-Opr-070502	Ochotona princeps	37.25	2.00e-41	161.00
IUUC-Ont-072436	Oreochromis niloticus	38.39	5.00e-65	240.00
IUUC-Oan-072730	Ornithorhynchus anatinus	36.62	9.00e-63	233.00
IUUC-Ocu-073997	Oryctolagus cuniculus	36.62	1.00e-62	232.00
IUUC-Oba-075935	Oryza barthii	84.62	0.00e+00	655.00
IUUC-Ogl-077599	Oryza glaberrima	84.87	0.00e+00	657.00
IUUC-Ogu-079031	Oryza glumaepatula	84.36	0.00e+00	684.00
IUUC-Oin-079236	Oryza indica	84.87	0.00e+00	657.00
IUUC-Olo-080825	Oryza longistaminata	84.62	0.00e+00	657.00
IUUC-Ome-081998	Oryza meridionalis	84.36	0.00e+00	655.00
IUUC-Oni-082555	Oryza nivara	84.87	0.00e+00	657.00
IUUC-Opu-084156	Oryza punctata	84.62	0.00e+00	654.00
IUUC-Oru-085269	Oryza rufipogon	84.87	0.00e+00	657.00
IUUC-Osa-085795	Oryza sativa	84.87	0.00e+00	657.00
IUUC-Ola-087481	Oryzias latipes	37.96	1.00e-63	235.00
IUUC-Oga-088917	Otolemur garnettii	36.62	1.00e-62	232.00
IUUC-Oar-090104	Ovis aries	36.62	1.00e-62	232.00
IUUC-Ptr-090545	Pan troglodytes	35.47	5.00e-58	217.00
IUUC-Pan-091970	Papio anubis	36.62	1.00e-62	232.00
IUUC-Psi-093133	Pelodiscus sinensis	36.62	6.00e-63	233.00
IUUC-Pma-094313	Petromyzon marinus	36.09	7.00e-64	236.00
IUUC-Pno-094966	Phaeosphaeria nodorum	31.84	4.00e-60	224.00
IUUC-Ppa-095525	Physcomitrella patens	50.51	6.00e-115	406.00
IUUC-Pfo-096415	Poecilia formosa	38.34	4.00e-63	234.00
IUUC-Pab-098226	Pongo abelii	36.62	1.00e-62	232.00
IUUC-Pop-099161	Populus trichocarpa	60.20	4.00e-137	480.00
IUUC-Pca-100101	Procavia capensis	38.32	5.00e-20	91.30
IUUC-Ppe-101172	Prunus persica	61.13	9.00e-132	462.00
IUUC-Pva-102124	Pteropus vampyrus	35.88	1.00e-50	192.00
IUUC-Pgr-103586	Puccinia graminis	39.90	8.00e-31	127.00
IUUC-Pte-104149	Pyrenophora teres	32.55	1.00e-58	219.00
IUUC-Pyt-104577	Pyrenophora triticirepentis	39.92	1.00e-52	199.00
IUUC-Rno-105160	Rattus norvegicus	36.62	1.00e-62	232.00
IUUC-Sce-106260	Saccharomyces cerevisiae	28.80	3.00e-25	108.00
IUUC-Sha-107085	Sarcophilus harrisii	32.49	8.00e-59	219.00
IUUC-Sja-107986	Schizosaccharomyces japonicus	32.78	6.00e-38	150.00
IUUC-Spo-108054	Schizosaccharomyces pombe	33.04	8.00e-52	196.00
IUUC-Ssl-108439	Sclerotinia sclerotiorum	42.91	2.00e-56	211.00
IUUC-Smo-109084	Selaginella moellendorffii	53.57	1.00e-117	415.00
IUUC-Sit-109808	Setaria italica	94.62	0.00e+00	769.00
IUUC-Sly-111578	Solanum lycopersicum	59.59	6.00e-139	486.00
IUUC-Stu-112255	Solanum tuberosum	59.85	4.00e-139	486.00
IUUC-Sar-113433	Sorex araneus	34.78	9.00e-23	100.00
IUUC-Sre-115108	Sporisorium reilianum	24.56	8.00e-33	134.00
IUUC-Ssc-115466	Sus scrofa	36.62	8.00e-63	233.00
IUUC-Tgu-116744	Taeniopygia guttata	33.42	1.00e-63	236.00
IUUC-Tru-118729	Takifugu rubripes	38.58	2.00e-64	238.00
IUUC-Tsy-119164	Tarsius syrichta	36.62	7.00e-63	233.00
IUUC-Tni-119975	Tetraodon nigroviridis	38.08	5.00e-64	237.00
IUUC-Tca-121086	Theobroma cacao	60.87	1.00e-131	461.00
IUUC-Tre-122252	Trichoderma reesei	33.61	3.00e-46	178.00
IUUC-Tvi-122591	Trichoderma virens	32.88	1.00e-45	176.00
IUUC-Tae-122825	Triticum aestivum	81.79	0.00e+00	661.00
IUUC-Tur-126299	Triticum urartu	81.79	0.00e+00	662.00
IUUC-Tme-127008	Tuber melanosporum	35.10	6.00e-66	243.00
IUUC-Tbe-128119	Tupaia belangeri	36.62	1.00e-62	232.00
IUUC-Ttr-128810	Tursiops truncatus	35.45	9.00e-56	209.00
IUUC-Uma-129656	Ustilago maydis	25.11	6.00e-31	127.00
IUUC-Vda-129967	Verticillium dahliae	39.66	4.00e-50	191.00
IUUC-Vvi-131145	Vitis vinifera	66.15	1.00e-149	521.00
IUUC-Xtr-132522	Xenopus tropicalis	36.20	1.00e-59	223.00
IUUC-Xma-134046	Xiphophorus maculatus	38.70	1.00e-64	239.00
IUUC-Yli-134400	Yarrowia lipolytica	34.35	5.00e-58	217.00
IUUC-Zma-134785	Zea mays	97.18	0.00e+00	787.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence