iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlrt 32
           H+ +v++++  +   ++l++Gs+D  + +WD+r 
   Q: 237  HSMGVCSIQSsPHreHILATGSYDEHVLLWDTRN 270
           555677776663333679*************876 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAGSRTGVLR ALQAVDTELT ADSVEWCPVE GCQHLLACGT YQLRAPKDQP APDGSEPQVR 60
LGRLYLFSFS EDNTAKPLLE VQRRDSSAVL DMKWCHIPVS GHVLLGLANA SGSVELLRLM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGGCA GCCGTACCGG GGTTTTGCGA GCGCTGCAGG CAGTGGACAC CGAGCTTACT 60
GCGGACTCGG TGGAATGGTG CCCGGTTGAG GGTTGCCAGC ATCTGCTGGC CTGCGGAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0017183--P:peptidyl-diphthamide biosynthetic process from peptidyl-histidine

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000566	Aegilops tauschii	39.20	3.00e-31	128.00
IUUC-Aml-001799	Ailuropoda melanoleuca	63.91	3.00e-168	584.00
IUUC-Atr-002540	Amborella trichopoda	42.36	2.00e-38	152.00
IUUC-Apl-003582	Anas platyrhynchos	48.28	9.00e-103	367.00
IUUC-Aca-004275	Anolis carolinensis	51.07	1.00e-96	345.00
IUUC-Aly-005425	Arabidopsis lyrata	35.06	3.00e-44	172.00
IUUC-Ath-007434	Arabidopsis thaliana	36.09	2.00e-45	176.00
IUUC-Ago-007782	Ashbya gossypii	33.14	1.00e-13	70.50
IUUC-Ang-009512	Aspergillus niger	26.13	2.00e-05	43.50
IUUC-Ame-011276	Astyanax mexicanus	45.36	4.00e-62	231.00
IUUC-Bta-012985	Bos taurus	61.14	3.00e-154	538.00
IUUC-Bdi-014568	Brachypodium distachyon	32.93	6.00e-37	147.00
IUUC-Bol-016236	Brassica oleracea	34.56	4.00e-44	171.00
IUUC-Bra-017012	Brassica rapa	33.94	5.00e-42	164.00
IUUC-Cel-018435	Caenorhabditis elegans	27.72	3.00e-14	72.40
IUUC-Cja-018952	Callithrix jacchus	63.32	8.00e-161	560.00
IUUC-Cfa-021210	Canis familiaris	64.52	1.00e-167	582.00
IUUC-Cpo-022017	Cavia porcellus	60.30	6.00e-142	497.00
IUUC-Cre-022584	Chlamydomonas reinhardtii	46.76	9.00e-32	129.00
IUUC-Csa-023897	Chlorocebus sabaeus	65.35	7.00e-156	543.00
IUUC-Cho-024708	Choloepus hoffmanni	48.79	2.00e-55	208.00
IUUC-Cin-025485	Ciona intestinalis	40.65	3.00e-62	231.00
IUUC-Cne-026845	Cryptococcus neoformans	34.08	1.00e-44	173.00
IUUC-Cme-027194	Cyanidioschyzon merolae	29.15	1.00e-18	87.40
IUUC-Dre-028581	Danio rerio	46.15	7.00e-98	350.00
IUUC-Dno-029285	Dasypus novemcinctus	60.95	1.00e-156	545.00
IUUC-Dor-030566	Dipodomys ordii	62.93	2.00e-159	555.00
IUUC-Dme-031714	Drosophila melanogaster	36.47	3.00e-51	195.00
IUUC-Ete-032317	Echinops telfairi	50.50	2.00e-106	378.00
IUUC-Eca-033341	Equus caballus	81.95	3.00e-64	236.00
IUUC-Eeu-034890	Erinaceus europaeus	56.84	5.00e-146	510.00
IUUC-Fca-035966	Felis catus	61.37	1.00e-161	563.00
IUUC-Fal-037338	Ficedula albicollis	49.68	5.00e-116	410.00
IUUC-Gmo-039487	Gadus morhua	50.28	1.00e-89	323.00
IUUC-Gga-040691	Gallus gallus	46.42	1.00e-100	359.00
IUUC-Gac-041912	Gasterosteus aculeatus	44.44	4.00e-98	351.00
IUUC-Gma-042905	Glycine max	35.37	8.00e-43	167.00
IUUC-Ggo-045003	Gorilla gorilla	65.79	1.00e-173	602.00
IUUC-Hsa-046840	Homo sapiens	66.01	3.00e-174	604.00
IUUC-Hvu-047291	Hordeum vulgare	34.65	9.00e-40	157.00
IUUC-Itr-048072	Ictidomys tridecemlineatus	63.89	6.00e-162	563.00
IUUC-Kpa-049296	Komagataella pastoris	28.57	1.00e-15	77.40
IUUC-Lch-049627	Latimeria chalumnae	48.93	2.00e-118	419.00
IUUC-Lpe-051462	Leersia perrieri	33.33	4.00e-40	158.00
IUUC-Loc-052917	Lepisosteus oculatus	55.24	7.00e-102	363.00
IUUC-Laf-054268	Loxodonta africana	59.57	9.00e-149	520.00
IUUC-Mcc-055309	Macaca mulatta	65.57	3.00e-173	601.00
IUUC-Meu-055985	Macropus eugenii	63.93	5.00e-117	413.00
IUUC-Mtr-058767	Medicago truncatula	36.36	7.00e-44	171.00
IUUC-Mla-059032	Melampsora laricipopulina	35.93	8.00e-51	194.00
IUUC-Mga-059799	Meleagris gallopavo	47.75	3.00e-90	325.00
IUUC-Mvi-060258	Microbotryum violaceum	37.60	1.00e-51	196.00
IUUC-Mmr-061425	Microcebus murinus	64.32	3.00e-167	581.00
IUUC-Mdo-062620	Monodelphis domestica	51.72	3.00e-134	471.00
IUUC-Mmu-063473	Mus musculus	84.58	0.00e+00	818.00
IUUC-Mac-065376	Musa acuminata	33.74	3.00e-44	172.00
IUUC-Mpu-066124	Mustela putorius furo	62.03	1.00e-166	579.00
IUUC-Mlu-067844	Myotis lucifugus	57.48	3.00e-145	508.00
IUUC-Ont-071523	Oreochromis niloticus	54.52	8.00e-103	367.00
IUUC-Oan-072754	Ornithorhynchus anatinus	46.35	6.00e-91	327.00
IUUC-Ocu-074659	Oryctolagus cuniculus	61.23	2.00e-106	378.00
IUUC-Oba-075786	Oryza barthii	39.75	2.00e-30	125.00
IUUC-Obr-076077	Oryza brachyantha	32.01	1.00e-38	153.00
IUUC-Ogl-077449	Oryza glaberrima	32.93	2.00e-39	155.00
IUUC-Ogu-078217	Oryza glumaepatula	33.03	7.00e-39	154.00
IUUC-Oin-079292	Oryza indica	32.93	2.00e-39	155.00
IUUC-Olo-080599	Oryza longistaminata	39.75	2.00e-30	125.00
IUUC-Ome-081740	Oryza meridionalis	33.03	5.00e-39	155.00
IUUC-Oni-082582	Oryza nivara	33.03	5.00e-39	154.00
IUUC-Opu-083166	Oryza punctata	32.83	6.00e-37	147.00
IUUC-Oru-084514	Oryza rufipogon	32.48	2.00e-35	142.00
IUUC-Osa-086226	Oryza sativa	32.93	2.00e-39	155.00
IUUC-Olu-087798	Ostreococcus lucimarinus	34.94	2.00e-27	115.00
IUUC-Oga-088820	Otolemur garnettii	66.81	4.00e-171	594.00
IUUC-Oar-089825	Ovis aries	57.17	3.00e-140	491.00
IUUC-Pan-091766	Papio anubis	61.57	3.00e-156	545.00
IUUC-Psi-093167	Pelodiscus sinensis	51.27	3.00e-131	461.00
IUUC-Pno-095089	Phaeosphaeria nodorum	25.59	4.00e-13	68.90
IUUC-Ppa-095299	Physcomitrella patens	40.06	5.00e-50	191.00
IUUC-Pfo-096456	Poecilia formosa	55.09	1.00e-98	353.00
IUUC-Pab-097864	Pongo abelii	64.79	3.00e-104	371.00
IUUC-Pop-100043	Populus trichocarpa	37.12	2.00e-36	146.00
IUUC-Ppe-101556	Prunus persica	34.94	4.00e-44	171.00
IUUC-Pva-102281	Pteropus vampyrus	61.74	4.00e-157	547.00
IUUC-Pgr-103459	Puccinia graminis	36.99	2.00e-33	135.00
IUUC-Sce-106325	Saccharomyces cerevisiae	31.18	1.00e-05	44.30
IUUC-Sha-107077	Sarcophilus harrisii	52.37	4.00e-130	457.00
IUUC-Smo-109371	Selaginella moellendorffii	39.10	6.00e-57	214.00
IUUC-Sit-109789	Setaria italica	40.37	2.00e-31	129.00
IUUC-Sly-110953	Solanum lycopersicum	39.29	1.00e-32	133.00
IUUC-Stu-112698	Solanum tuberosum	35.76	8.00e-45	174.00
IUUC-Sbi-114197	Sorghum bicolor	31.71	7.00e-37	147.00
IUUC-Sre-115167	Sporisorium reilianum	43.53	6.00e-31	128.00
IUUC-Tgu-116657	Taeniopygia guttata	63.73	1.00e-72	265.00
IUUC-Tru-118578	Takifugu rubripes	45.09	2.00e-98	352.00
IUUC-Tca-121611	Theobroma cacao	38.10	6.00e-45	174.00
IUUC-Tae-124972	Triticum aestivum	33.64	4.00e-40	159.00
IUUC-Tur-126298	Triticum urartu	39.77	3.00e-32	131.00
IUUC-Ttr-128302	Tursiops truncatus	63.86	4.00e-118	417.00
IUUC-Uma-129644	Ustilago maydis	41.32	2.00e-31	129.00
IUUC-Vvi-131363	Vitis vinifera	34.95	2.00e-39	156.00
IUUC-Xtr-132976	Xenopus tropicalis	45.20	2.00e-101	362.00
IUUC-Xma-133286	Xiphophorus maculatus	46.84	3.00e-103	369.00
IUUC-Yli-134664	Yarrowia lipolytica	27.97	9.00e-18	84.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence