iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087251

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Coronin

Genbank Nucleotide ID

BAAF04096312

Gene Name

coro1b; LOC101156124

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000006000.1	ENSORLT00000007547.1	ENSORLP00000007546.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-16	58.5	81	118

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+++v ++++  +d ++++s+s D+t+kvW + +g l
   Q: 81   GHAAPVLDIQWcpHDdNIIASASEDCTVKVWQIPDGGL 118
           8***********9445***************9988865 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MSFRRGVVRQ SKFRHVFAQA WKSEHCIDDV RVSRVTWDGP LCAVNPKFIA VIIEAGGGGT 60
FLVVPINKSG RVDQSCPTVC GHAAPVLDIQ WCPHDDNIIA SASEDCTVKV WQIPDGGLTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTTCC GAAGAGGTGT GGTCAGGCAG AGCAAGTTCC GCCATGTCTT TGCGCAGGCC 60
TGGAAGTCCG AGCACTGCAT TGATGACGTG AGGGTGTCCC GGGTGACGTG GGACGGCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011896	Astyanax mexicanus	78.46	0.00e+00	808.00
IUUC-Dre-027853	Danio rerio	79.24	0.00e+00	804.00
IUUC-Gmo-038572	Gadus morhua	85.78	0.00e+00	778.00
IUUC-Gac-042055	Gasterosteus aculeatus	84.73	0.00e+00	850.00
IUUC-Ont-072594	Oreochromis niloticus	85.88	0.00e+00	859.00
IUUC-Pfo-097282	Poecilia formosa	85.10	0.00e+00	885.00
IUUC-Tru-118370	Takifugu rubripes	84.86	0.00e+00	863.00
IUUC-Tni-120810	Tetraodon nigroviridis	86.76	0.00e+00	857.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence