iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099121

Ensembl Protein ID

POPTR_0009s07610.1

UniProt Accession

B9HNF1; B9HNF1_POPTR

Genbank Protein ID

EEE87948.2

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_1087666; POPTR_0009s07610g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s07610	POPTR_0009s07610.1	POPTR_0009s07610.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/HECT	36.63	1.00e-50	200.00	IUUC-Hsa-046516

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MLRGDRMASD LGRTGPVERD IEQAITALKK GAYLLKYGRR GKPKFCPFRL SNDESVLIWF 60
SGKEEKHLRL SHVSKIISGQ RTPIFQRYPR PEKEYQSFSL IYNDRSLDLI CKDKDEAEVW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTCTTTAT TCTCTCTCTT CAGTCTTCCC TTGAGCTCCA TAAAATAAAA TAAAATAAAA 60
GCACTACTCC TCACTTGAGA GAGGAAAAAA AAAGTAGCAA AAAGCTTTTG GTCTCTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR013591--Brevis_radix_dom
IPR027988--BRX_N
IPR011993--PH_dom-like
IPR001849--PH_domain
IPR016106--Pyr-dep_his-deCO2ase_subdom
IPR009091--RCC1/BLIP-II
IPR000408--Reg_chr_condens
IPR000306--Znf_FYVE
IPR017455--Znf_FYVE-rel
IPR011011--Znf_FYVE_PHD
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51514--BRX
PS00626--RCC1_2
PS50012--RCC1_3
PS50178--ZF_FYVE

Pfam

PF08381--BRX
PF13713--BRX_N
PF01363--FYVE
PF16457--PH_12
PF00415--RCC1

PRINTS

PR00633--RCCNDNSATION

SMART

SM00064--FYVE
SM00233--PH

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

pop:POPTR_0009s07610g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001830	Ailuropoda melanoleuca	36.84	2.00e-50	196.00
IUUC-Atr-003065	Amborella trichopoda	66.99	0.00e+00	1397.00
IUUC-Apl-003461	Anas platyrhynchos	35.22	2.00e-53	206.00
IUUC-Aca-004452	Anolis carolinensis	37.10	3.00e-51	199.00
IUUC-Aly-006545	Arabidopsis lyrata	78.30	0.00e+00	1544.00
IUUC-Ame-010621	Astyanax mexicanus	32.56	9.00e-43	170.00
IUUC-Bta-013213	Bos taurus	36.84	2.00e-50	196.00
IUUC-Bdi-014093	Brachypodium distachyon	38.62	0.00e+00	650.00
IUUC-Bol-015203	Brassica oleracea	77.34	0.00e+00	1549.00
IUUC-Bra-016737	Brassica rapa	76.08	0.00e+00	1491.00
IUUC-Cja-019298	Callithrix jacchus	36.84	1.00e-50	196.00
IUUC-Cfa-021213	Canis familiaris	36.55	2.00e-50	196.00
IUUC-Cpo-021674	Cavia porcellus	36.55	3.00e-50	195.00
IUUC-Cre-023014	Chlamydomonas reinhardtii	33.24	9.00e-42	163.00
IUUC-Csa-023341	Chlorocebus sabaeus	36.55	1.00e-50	197.00
IUUC-Cho-024387	Choloepus hoffmanni	34.01	3.00e-35	145.00
IUUC-Cin-025709	Ciona intestinalis	30.41	3.00e-33	138.00
IUUC-Csv-026336	Ciona savignyi	33.41	1.00e-40	163.00
IUUC-Dre-028289	Danio rerio	34.87	2.00e-51	199.00
IUUC-Dno-029988	Dasypus novemcinctus	36.84	1.00e-50	197.00
IUUC-Dor-030636	Dipodomys ordii	36.55	2.00e-50	196.00
IUUC-Dme-032171	Drosophila melanogaster	34.50	2.00e-38	156.00
IUUC-Ete-032687	Echinops telfairi	30.65	5.00e-29	125.00
IUUC-Eca-033754	Equus caballus	36.42	3.00e-49	192.00
IUUC-Eeu-034859	Erinaceus europaeus	34.52	3.00e-35	145.00
IUUC-Fca-035900	Felis catus	36.84	2.00e-50	196.00
IUUC-Fal-037034	Ficedula albicollis	34.70	4.00e-51	198.00
IUUC-Gga-040321	Gallus gallus	35.22	1.00e-52	203.00
IUUC-Gac-042444	Gasterosteus aculeatus	33.93	6.00e-53	204.00
IUUC-Gma-043808	Glycine max	50.15	6.00e-174	604.00
IUUC-Ggo-045134	Gorilla gorilla	36.26	3.00e-50	195.00
IUUC-Hsa-046516	Homo sapiens	36.55	2.00e-50	196.00
IUUC-Hvu-047529	Hordeum vulgare	74.66	0.00e+00	1351.00
IUUC-Itr-048914	Ictidomys tridecemlineatus	36.76	2.00e-49	191.00
IUUC-Lch-049903	Latimeria chalumnae	37.13	1.00e-51	200.00
IUUC-Lpe-051482	Leersia perrieri	62.98	0.00e+00	639.00
IUUC-Loc-052805	Lepisosteus oculatus	34.22	7.00e-54	207.00
IUUC-Laf-053426	Loxodonta africana	36.84	2.00e-50	196.00
IUUC-Mcc-055826	Macaca mulatta	36.55	1.00e-50	196.00
IUUC-Mtr-058277	Medicago truncatula	34.41	1.00e-46	180.00
IUUC-Mga-059371	Meleagris gallopavo	33.85	3.00e-44	175.00
IUUC-Mvi-060436	Microbotryum violaceum	28.66	1.00e-11	64.30
IUUC-Mmr-061512	Microcebus murinus	36.84	7.00e-51	197.00
IUUC-Mdo-062177	Monodelphis domestica	36.55	3.00e-50	196.00
IUUC-Mmu-064373	Mus musculus	34.45	3.00e-51	199.00
IUUC-Mpu-066148	Mustela putorius furo	36.84	9.00e-51	197.00
IUUC-Mlu-067680	Myotis lucifugus	36.55	5.00e-50	194.00
IUUC-Nle-069633	Nomascus leucogenys	35.38	2.00e-43	172.00
IUUC-Opr-070990	Ochotona princeps	34.77	1.00e-35	147.00
IUUC-Ont-072285	Oreochromis niloticus	34.11	5.00e-44	174.00
IUUC-Oan-073157	Ornithorhynchus anatinus	33.59	2.00e-49	193.00
IUUC-Ocu-074841	Oryctolagus cuniculus	36.55	2.00e-50	196.00
IUUC-Oba-075573	Oryza barthii	63.60	0.00e+00	639.00
IUUC-Obr-076107	Oryza brachyantha	37.40	1.00e-178	620.00
IUUC-Ogl-077193	Oryza glaberrima	63.38	0.00e+00	638.00
IUUC-Ogu-078817	Oryza glumaepatula	63.60	0.00e+00	639.00
IUUC-Oin-079609	Oryza indica	37.34	3.00e-158	552.00
IUUC-Olo-080629	Oryza longistaminata	63.60	0.00e+00	639.00
IUUC-Ome-081686	Oryza meridionalis	63.17	0.00e+00	638.00
IUUC-Oni-082049	Oryza nivara	36.34	7.00e-47	181.00
IUUC-Opu-084137	Oryza punctata	47.68	0.00e+00	734.00
IUUC-Oru-085013	Oryza rufipogon	63.60	0.00e+00	639.00
IUUC-Osa-085597	Oryza sativa	63.60	0.00e+00	639.00
IUUC-Ola-086308	Oryzias latipes	32.48	1.00e-50	196.00
IUUC-Olu-087836	Ostreococcus lucimarinus	29.32	8.00e-20	90.50
IUUC-Oga-088459	Otolemur garnettii	36.55	2.00e-50	196.00
IUUC-Oar-089888	Ovis aries	36.84	1.00e-50	196.00
IUUC-Ptr-091114	Pan troglodytes	36.55	2.00e-50	196.00
IUUC-Pan-092442	Papio anubis	36.55	1.00e-50	196.00
IUUC-Psi-093833	Pelodiscus sinensis	34.70	3.00e-52	201.00
IUUC-Pma-094275	Petromyzon marinus	31.69	2.00e-34	141.00
IUUC-Pfo-096464	Poecilia formosa	34.27	1.00e-50	197.00
IUUC-Pab-097760	Pongo abelii	36.55	2.00e-50	196.00
IUUC-Pca-100465	Procavia capensis	35.22	4.00e-52	201.00
IUUC-Ppe-101345	Prunus persica	51.72	0.00e+00	969.00
IUUC-Pva-102950	Pteropus vampyrus	36.84	2.00e-50	196.00
IUUC-Rno-104892	Rattus norvegicus	34.45	3.00e-51	199.00
IUUC-Sce-106309	Saccharomyces cerevisiae	28.81	2.00e-08	52.40
IUUC-Sha-106959	Sarcophilus harrisii	33.85	3.00e-44	175.00
IUUC-Smo-108827	Selaginella moellendorffii	60.14	0.00e+00	1147.00
IUUC-Sit-109917	Setaria italica	60.23	0.00e+00	657.00
IUUC-Sly-110961	Solanum lycopersicum	82.36	0.00e+00	1439.00
IUUC-Stu-112166	Solanum tuberosum	51.63	0.00e+00	974.00
IUUC-Sar-113251	Sorex araneus	31.30	8.00e-34	140.00
IUUC-Sbi-114352	Sorghum bicolor	38.46	7.00e-159	554.00
IUUC-Sre-115030	Sporisorium reilianum	24.86	8.00e-09	55.10
IUUC-Ssc-116391	Sus scrofa	36.84	2.00e-50	196.00
IUUC-Tgu-116554	Taeniopygia guttata	37.21	4.00e-53	205.00
IUUC-Tru-118129	Takifugu rubripes	33.17	5.00e-44	174.00
IUUC-Tsy-119619	Tarsius syrichta	33.64	4.00e-40	159.00
IUUC-Tni-120374	Tetraodon nigroviridis	33.17	4.00e-44	175.00
IUUC-Tca-121094	Theobroma cacao	59.08	0.00e+00	1154.00
IUUC-Tae-124157	Triticum aestivum	40.15	0.00e+00	701.00
IUUC-Tur-126300	Triticum urartu	71.21	0.00e+00	1228.00
IUUC-Tbe-127640	Tupaia belangeri	33.64	6.00e-40	159.00
IUUC-Ttr-128542	Tursiops truncatus	36.84	2.00e-50	196.00
IUUC-Xtr-131933	Xenopus tropicalis	35.57	9.00e-52	200.00
IUUC-Xma-134135	Xiphophorus maculatus	34.02	4.00e-51	198.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence