iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126568

Ensembl Protein ID

TRIUR3_17458-P1

UniProt Accession

M7Z9U5; M7Z9U5_TRIUA

Genbank Protein ID

EMS56822.1

Protein Name

Methyl-CpG-binding domain-containing protein 9

Genbank Nucleotide ID

KD153723

Gene Name

TRIUR3_17458

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_17458	TRIUR3_17458-T1	TRIUR3_17458-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.50e-08	35.5	666	711

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C vC +  +d+   + C+ C+e++H  C  +   +  p+ + w+C+ C+
   Q: 666  CRVCLSDRDDD-LTILCDGCDEAYHLYCITPR-RTWIPKGK-WYCSHCS 711
           ******99987.799*****************.999****7.******7 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MATDLDGVAQ CRFGVRCGRM DSRRRTTLSG VVVASMAERP GTILKHPRKT RFNLRKHIVI 60
IDEIARHWRC RYCGMDGHGK TSRLHYHLAG VFRHPKCTSV PKEVFAKAKH HILIKRRPGM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACGG ATCTTGACGG CGTGGCGCAG TGCAGATTCG GAGTTCGCTG TGGGAGGATG 60
GACTCACGCA GGAGGACGAC GTTGTCGGGC GTCGTGGTGG CGTCGATGGC AGAGAGACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003656--Znf_BED
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50808--ZF_BED
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000089	Aegilops tauschii	96.83	0.00e+00	1456.00
IUUC-Bdi-014359	Brachypodium distachyon	67.13	0.00e+00	1001.00
IUUC-Bol-016145	Brassica oleracea	31.29	2.00e-49	189.00
IUUC-Bra-017951	Brassica rapa	30.44	2.00e-44	172.00
IUUC-Fal-037179	Ficedula albicollis	30.39	2.00e-09	59.70
IUUC-Gga-040815	Gallus gallus	30.39	9.00e-11	63.90
IUUC-Hvu-047708	Hordeum vulgare	74.49	0.00e+00	849.00
IUUC-Lpe-051599	Leersia perrieri	52.48	0.00e+00	789.00
IUUC-Loc-051979	Lepisosteus oculatus	35.06	9.00e-11	64.30
IUUC-Oba-075869	Oryza barthii	53.96	0.00e+00	808.00
IUUC-Obr-076535	Oryza brachyantha	53.53	0.00e+00	770.00
IUUC-Ogl-077688	Oryza glaberrima	60.94	6.00e-107	379.00
IUUC-Ogu-078065	Oryza glumaepatula	53.96	0.00e+00	809.00
IUUC-Oin-079589	Oryza indica	54.33	0.00e+00	816.00
IUUC-Olo-081075	Oryza longistaminata	54.33	0.00e+00	817.00
IUUC-Oni-082357	Oryza nivara	54.21	0.00e+00	812.00
IUUC-Opu-083175	Oryza punctata	53.59	0.00e+00	813.00
IUUC-Oru-085009	Oryza rufipogon	54.21	0.00e+00	809.00
IUUC-Pma-094252	Petromyzon marinus	30.77	6.00e-10	60.50
IUUC-Pfo-097525	Poecilia formosa	35.06	1.00e-09	60.50
IUUC-Sit-110347	Setaria italica	57.45	7.00e-142	497.00
IUUC-Stu-112523	Solanum tuberosum	34.22	1.00e-39	155.00
IUUC-Sbi-114812	Sorghum bicolor	57.75	2.00e-142	499.00
IUUC-Tae-125487	Triticum aestivum	85.60	0.00e+00	1337.00
IUUC-Vpa-130236	Vicugna pacos	29.66	9.00e-12	67.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence