iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130862

UUCD1 version

UUC-ViV-00077

Ensembl Protein ID

VIT_15s0021g00890.t01

UniProt Accession

D7SM36; D7SM36_VITVI

Genbank Protein ID

CBI16714.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594952

Gene Name

ATL4; VIT_15s0021g00890

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_15s0021g00890	VIT_15s0021g00890.t01	VIT_15s0021g00890.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-07	30.7	46	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f   d++++lp C H+fha C+  w         +++CPlCr
   Q: 46   CAVCLSKFepHDQLRLLPiCCHAFHARCIDTW------LASNQTCPLCR 88
           ******997755599*****************......9*********8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MTDALSPPPA WFPGIFPDED LSLIDSLPLF TFGSVRGRNS SSEGDCAVCL SKFEPHDQLR 60
LLPICCHAFH ARCIDTWLAS NQTCPLCRSP IFATEADFMK AILAGETIDD AGAQSNQLAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCAGAAATC CCTGCATTCA CTGCCGGCAT TCATTCCTGC ACCTGCCTAA ACCTCAGCCA 60
TCGCCCTTCA GTGGCACTAT CATTCAGTAC GAGGCGCCAC CCGCCCGTCA CGTGCCTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004373	Anolis carolinensis	45.71	2.00e-14	73.20
IUUC-Aly-005918	Arabidopsis lyrata	71.08	2.00e-29	122.00
IUUC-Ath-007239	Arabidopsis thaliana	73.17	1.00e-29	122.00
IUUC-Bol-015819	Brassica oleracea	71.95	4.00e-29	120.00
IUUC-Bra-017936	Brassica rapa	46.69	2.00e-45	174.00
IUUC-Gma-043797	Glycine max	41.94	4.00e-28	117.00
IUUC-Mtr-058303	Medicago truncatula	41.87	3.00e-32	130.00
IUUC-Mac-065570	Musa acuminata	56.58	1.00e-16	79.70
IUUC-Ont-072086	Oreochromis niloticus	42.31	6.00e-14	72.00
IUUC-Psi-093735	Pelodiscus sinensis	42.67	1.00e-13	70.90
IUUC-Pfo-096637	Poecilia formosa	43.59	3.00e-14	73.20
IUUC-Pop-100094	Populus trichocarpa	41.74	3.00e-37	148.00
IUUC-Ppe-101209	Prunus persica	67.95	1.00e-24	106.00
IUUC-Sly-111858	Solanum lycopersicum	59.00	8.00e-30	123.00
IUUC-Stu-112105	Solanum tuberosum	61.00	1.00e-30	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence