iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095397

Ensembl Protein ID

PP1S159_80V6.1

UniProt Accession

A9T3I6; A9T3I6_PHYPA

Genbank Protein ID

EDQ62045.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545048

Gene Name

PHYPADRAFT_139731

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S159_80V6	PP1S159_80V6.1	PP1S159_80V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-08	35.4	342	372

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           l+f  d + l+s ++Dg ++ WDlrt ++++
   Q: 342  LSFaADgKELLSIGGDGEVYHWDLRTRRCIH 372
           6778555899****************99986 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MKKRGRTEAV AADADANAYA VIKPNMESLL EEVMGEKPEE PEDDPTTDAV EEPSASKIIV 60
AGAGIEQREE RKPAWEDEHD AAVVVDLKAA SRLKKLRTTA DELVIPASEY AARLRAHHAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCACGACG TCGCAGAAGA AGCTCAAAGG TTCTCTTTGT TGCGGTTTTT GCAGGCACCG 60
CGCTCAAGGG CGCCTCGAGA GAGAGTGTGA GAGGACAATG AAGAAGCGTG GCAGAACCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ppp:PHYPADRAFT_139731

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000184	Aegilops tauschii	51.60	3.00e-132	464.00
IUUC-Aml-002252	Ailuropoda melanoleuca	42.43	7.00e-80	290.00
IUUC-Atr-002575	Amborella trichopoda	52.39	7.00e-138	483.00
IUUC-Aly-006512	Arabidopsis lyrata	49.11	2.00e-126	445.00
IUUC-Ath-007244	Arabidopsis thaliana	50.23	4.00e-126	444.00
IUUC-Ago-007895	Ashbya gossypii	31.50	3.00e-47	182.00
IUUC-Acl-008343	Aspergillus clavatus	32.20	1.00e-53	203.00
IUUC-Afl-008445	Aspergillus flavus	31.55	9.00e-60	224.00
IUUC-Aor-009986	Aspergillus oryzae	31.76	6.00e-59	221.00
IUUC-Ame-011338	Astyanax mexicanus	43.03	6.00e-81	293.00
IUUC-Bgr-012201	Blumeria graminis	31.75	8.00e-61	227.00
IUUC-Bta-013058	Bos taurus	42.14	1.00e-81	296.00
IUUC-Bci-013619	Botrytis cinerea	29.09	7.00e-52	197.00
IUUC-Bdi-014771	Brachypodium distachyon	51.14	3.00e-129	454.00
IUUC-Bol-015230	Brassica oleracea	52.49	4.00e-125	440.00
IUUC-Bra-017041	Brassica rapa	51.54	5.00e-123	434.00
IUUC-Cel-018293	Caenorhabditis elegans	25.78	3.00e-39	155.00
IUUC-Cja-019503	Callithrix jacchus	42.73	2.00e-82	299.00
IUUC-Cfa-020743	Canis familiaris	43.65	2.00e-81	295.00
IUUC-Cpo-021488	Cavia porcellus	42.43	9.00e-81	293.00
IUUC-Cre-022926	Chlamydomonas reinhardtii	50.70	4.00e-92	331.00
IUUC-Csa-023110	Chlorocebus sabaeus	41.84	1.00e-80	293.00
IUUC-Cin-025208	Ciona intestinalis	36.08	6.00e-64	237.00
IUUC-Cme-027351	Cyanidioschyzon merolae	31.81	1.00e-58	220.00
IUUC-Dre-027524	Danio rerio	36.28	2.00e-61	229.00
IUUC-Dno-029243	Dasypus novemcinctus	41.84	1.00e-79	290.00
IUUC-Dor-030110	Dipodomys ordii	44.73	1.00e-80	293.00
IUUC-Dse-031217	Dothistroma septosporum	32.99	1.00e-53	204.00
IUUC-Dme-031999	Drosophila melanogaster	31.46	2.00e-49	189.00
IUUC-Eca-034350	Equus caballus	41.25	1.00e-78	286.00
IUUC-Eeu-034991	Erinaceus europaeus	43.55	4.00e-77	281.00
IUUC-Fal-036614	Ficedula albicollis	42.55	2.00e-79	289.00
IUUC-Gmo-039183	Gadus morhua	41.51	3.00e-76	278.00
IUUC-Gga-040922	Gallus gallus	37.67	2.00e-82	298.00
IUUC-Gac-041475	Gasterosteus aculeatus	42.86	3.00e-73	268.00
IUUC-Gma-043598	Glycine max	52.16	9.00e-135	473.00
IUUC-Ggo-044517	Gorilla gorilla	42.43	5.00e-82	297.00
IUUC-Hsa-045741	Homo sapiens	42.43	7.00e-82	297.00
IUUC-Hvu-047463	Hordeum vulgare	54.02	6.00e-50	189.00
IUUC-Itr-048128	Ictidomys tridecemlineatus	43.75	1.00e-84	306.00
IUUC-Kpa-049335	Komagataella pastoris	30.00	6.00e-50	191.00
IUUC-Lch-049816	Latimeria chalumnae	41.84	6.00e-78	284.00
IUUC-Lpe-051140	Leersia perrieri	50.68	2.00e-125	442.00
IUUC-Loc-051942	Lepisosteus oculatus	40.95	2.00e-75	276.00
IUUC-Laf-054245	Loxodonta africana	41.84	2.00e-80	292.00
IUUC-Meu-056300	Macropus eugenii	35.45	7.00e-65	240.00
IUUC-Mor-057184	Magnaporthe oryzae	29.03	2.00e-44	173.00
IUUC-Mtr-058019	Medicago truncatula	51.76	1.00e-129	456.00
IUUC-Mga-060179	Meleagris gallopavo	41.84	3.00e-81	294.00
IUUC-Mvi-060435	Microbotryum violaceum	35.71	1.00e-73	270.00
IUUC-Mdo-062187	Monodelphis domestica	40.29	7.00e-77	280.00
IUUC-Mmu-063386	Mus musculus	41.54	8.00e-81	293.00
IUUC-Mpu-066084	Mustela putorius furo	43.32	1.00e-81	296.00
IUUC-Mlu-068130	Myotis lucifugus	41.54	1.00e-77	283.00
IUUC-Nle-069743	Nomascus leucogenys	39.05	8.00e-70	257.00
IUUC-Opr-071111	Ochotona princeps	42.56	1.00e-81	296.00
IUUC-Ont-071979	Oreochromis niloticus	42.25	8.00e-80	290.00
IUUC-Ocu-073754	Oryctolagus cuniculus	42.56	8.00e-84	303.00
IUUC-Oba-075007	Oryza barthii	50.56	2.00e-129	454.00
IUUC-Obr-076447	Oryza brachyantha	51.48	2.00e-130	458.00
IUUC-Ogl-077733	Oryza glaberrima	50.56	2.00e-129	455.00
IUUC-Ogu-078828	Oryza glumaepatula	50.56	2.00e-129	455.00
IUUC-Oin-080152	Oryza indica	50.56	2.00e-129	455.00
IUUC-Olo-080983	Oryza longistaminata	50.80	8.00e-128	449.00
IUUC-Oni-082443	Oryza nivara	50.56	3.00e-129	454.00
IUUC-Opu-083771	Oryza punctata	51.71	2.00e-129	454.00
IUUC-Oru-084272	Oryza rufipogon	50.56	3.00e-129	454.00
IUUC-Osa-085885	Oryza sativa	50.56	2.00e-129	455.00
IUUC-Olu-087644	Ostreococcus lucimarinus	29.69	1.00e-34	140.00
IUUC-Oga-088834	Otolemur garnettii	42.73	9.00e-83	300.00
IUUC-Oar-089712	Ovis aries	41.84	5.00e-81	294.00
IUUC-Pan-092561	Papio anubis	42.14	1.00e-80	293.00
IUUC-Pfo-097068	Poecilia formosa	42.41	3.00e-79	288.00
IUUC-Pop-099471	Populus trichocarpa	53.18	2.00e-125	441.00
IUUC-Ppe-101684	Prunus persica	53.83	2.00e-135	475.00
IUUC-Pva-102851	Pteropus vampyrus	40.48	1.00e-73	270.00
IUUC-Pgr-103370	Puccinia graminis	35.27	3.00e-68	252.00
IUUC-Ptt-103838	Puccinia triticina	31.12	5.00e-57	214.00
IUUC-Rno-104910	Rattus norvegicus	43.32	3.00e-82	298.00
IUUC-Sce-106258	Saccharomyces cerevisiae	33.33	5.00e-57	214.00
IUUC-Sja-107746	Schizosaccharomyces japonicus	33.26	9.00e-68	250.00
IUUC-Spo-108268	Schizosaccharomyces pombe	34.39	4.00e-76	278.00
IUUC-Smo-108815	Selaginella moellendorffii	57.76	3.00e-148	517.00
IUUC-Sit-109706	Setaria italica	50.91	9.00e-129	452.00
IUUC-Sly-111533	Solanum lycopersicum	51.68	1.00e-132	465.00
IUUC-Stu-112853	Solanum tuberosum	52.03	1.00e-135	475.00
IUUC-Sbi-114747	Sorghum bicolor	50.91	7.00e-129	453.00
IUUC-Ssc-115916	Sus scrofa	43.03	6.00e-82	297.00
IUUC-Tgu-117291	Taeniopygia guttata	43.96	5.00e-81	294.00
IUUC-Tru-118724	Takifugu rubripes	42.43	2.00e-83	302.00
IUUC-Tsy-118928	Tarsius syrichta	45.79	8.00e-55	207.00
IUUC-Tca-121229	Theobroma cacao	53.27	1.00e-137	482.00
IUUC-Tae-125218	Triticum aestivum	51.60	5.00e-132	463.00
IUUC-Tur-126082	Triticum urartu	42.90	2.00e-74	272.00
IUUC-Ttr-128904	Tursiops truncatus	44.04	4.00e-68	251.00
IUUC-Vpa-130817	Vicugna pacos	42.26	1.00e-81	296.00
IUUC-Vvi-130982	Vitis vinifera	52.13	2.00e-132	465.00
IUUC-Xtr-132971	Xenopus tropicalis	40.65	7.00e-79	287.00
IUUC-Xma-133391	Xiphophorus maculatus	42.41	2.00e-79	288.00
IUUC-Yli-134613	Yarrowia lipolytica	38.74	3.00e-63	235.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence