iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012763

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RNF6 protein

Genbank Nucleotide ID

DAAA02033174

Gene Name

RNF6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000005318.5	ENSBTAT00000047301.2	ENSBTAP00000044516.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-06	27.6	616	657

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +d+   + ++ lpC H fh +C+ +w       s + +CP+Cr
   Q: 616  CSVCISDYvaGNKLRQLPCMHEFHIHCIDRW------LSENCTCPVCR 657
           9*******884449*****************......**********8 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MNRSRSQSDD GGEETSSQDQ HHQENERRWQ QERLHREEAY YQFINNLNDE DYRLMRDHNL 60
LGTPGEITSE ELQQRLDGVK EQIASQPDLR NGTTARDAGI PREGSNEDSL LEWLNTFLRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGTATCGGA GGCGGAGGGC AGGGGTGGCG AGAAAGTGAA GGTTGAGAAG TGAGCCTGAG 60
GCCCCCAAGC CCGACTGCCT CCGAGAGGGA GCGGGGTGGG AAGAAGGGCC CTGAAAGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0030424--C:axon
GO:0005737--C:cytoplasm
GO:0031965--C:nuclear membrane
GO:0016605--C:PML body
GO:0003677--F:DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030517--P:negative regulation of axon extension
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044314--P:protein K27-linked ubiquitination
GO:0070936--P:protein K48-linked ubiquitination
GO:0085020--P:protein K6-linked ubiquitination
GO:0060765--P:regulation of androgen receptor signaling pathway

KEGG

bta:527056

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000811	Aegilops tauschii	37.29	2.00e-08	52.00
IUUC-Aml-001415	Ailuropoda melanoleuca	74.71	0.00e+00	862.00
IUUC-Atr-003049	Amborella trichopoda	39.56	1.00e-14	72.80
IUUC-Apl-003834	Anas platyrhynchos	61.03	2.00e-102	366.00
IUUC-Aca-004373	Anolis carolinensis	53.22	5.00e-74	271.00
IUUC-Ame-011097	Astyanax mexicanus	50.84	1.00e-71	264.00
IUUC-Bdi-014880	Brachypodium distachyon	44.71	1.00e-16	80.10
IUUC-Bra-017280	Brassica rapa	41.33	8.00e-15	73.60
IUUC-Cja-018980	Callithrix jacchus	72.45	0.00e+00	851.00
IUUC-Cfa-020416	Canis familiaris	74.71	0.00e+00	870.00
IUUC-Cpo-022086	Cavia porcellus	73.02	3.00e-148	518.00
IUUC-Cre-022984	Chlamydomonas reinhardtii	38.46	1.00e-12	69.30
IUUC-Csa-023246	Chlorocebus sabaeus	75.34	0.00e+00	854.00
IUUC-Cho-024749	Choloepus hoffmanni	71.38	0.00e+00	694.00
IUUC-Cme-027313	Cyanidioschyzon merolae	47.06	1.00e-11	64.30
IUUC-Dre-028428	Danio rerio	60.70	1.00e-82	300.00
IUUC-Dno-029617	Dasypus novemcinctus	73.65	0.00e+00	826.00
IUUC-Dor-030800	Dipodomys ordii	75.53	1.00e-120	427.00
IUUC-Ete-032882	Echinops telfairi	70.55	2.00e-138	486.00
IUUC-Eca-033892	Equus caballus	74.30	0.00e+00	893.00
IUUC-Eeu-034563	Erinaceus europaeus	68.50	3.00e-84	305.00
IUUC-Fca-035765	Felis catus	73.98	0.00e+00	823.00
IUUC-Fal-036981	Ficedula albicollis	51.72	1.00e-147	517.00
IUUC-Gmo-039344	Gadus morhua	62.59	7.00e-93	334.00
IUUC-Gga-041114	Gallus gallus	61.95	5.00e-99	355.00
IUUC-Gac-042220	Gasterosteus aculeatus	60.43	9.00e-93	334.00
IUUC-Ggo-044902	Gorilla gorilla	74.34	0.00e+00	900.00
IUUC-Hsa-046548	Homo sapiens	74.20	0.00e+00	897.00
IUUC-Hvu-047082	Hordeum vulgare	48.72	8.00e-15	73.20
IUUC-Itr-048447	Ictidomys tridecemlineatus	74.42	0.00e+00	919.00
IUUC-Lch-050541	Latimeria chalumnae	59.72	2.00e-91	329.00
IUUC-Laf-054296	Loxodonta africana	70.61	0.00e+00	788.00
IUUC-Mcc-054858	Macaca mulatta	74.78	0.00e+00	872.00
IUUC-Meu-056296	Macropus eugenii	61.56	2.00e-121	429.00
IUUC-Mtr-057800	Medicago truncatula	41.56	3.00e-13	68.60
IUUC-Mga-059307	Meleagris gallopavo	62.08	6.00e-97	348.00
IUUC-Mmr-060699	Microcebus murinus	74.08	0.00e+00	868.00
IUUC-Mdo-062162	Monodelphis domestica	59.76	0.00e+00	639.00
IUUC-Mmu-064188	Mus musculus	66.47	0.00e+00	714.00
IUUC-Mpu-065891	Mustela putorius furo	75.58	0.00e+00	874.00
IUUC-Mlu-067177	Myotis lucifugus	72.16	0.00e+00	820.00
IUUC-Nle-069127	Nomascus leucogenys	74.20	0.00e+00	896.00
IUUC-Ont-072086	Oreochromis niloticus	59.39	9.00e-92	331.00
IUUC-Ocu-074281	Oryctolagus cuniculus	88.24	2.00e-67	247.00
IUUC-Oba-075147	Oryza barthii	39.47	2.00e-13	69.30
IUUC-Ogl-077391	Oryza glaberrima	39.47	2.00e-13	68.60
IUUC-Ome-081556	Oryza meridionalis	41.67	4.00e-16	78.20
IUUC-Opu-083678	Oryza punctata	40.00	3.00e-14	73.60
IUUC-Oru-084498	Oryza rufipogon	39.47	2.00e-13	68.90
IUUC-Osa-085837	Oryza sativa	39.47	2.00e-13	68.90
IUUC-Ola-087452	Oryzias latipes	60.07	5.00e-92	332.00
IUUC-Olu-087781	Ostreococcus lucimarinus	44.26	5.00e-13	67.00
IUUC-Oga-088750	Otolemur garnettii	74.82	0.00e+00	865.00
IUUC-Oar-089523	Ovis aries	94.66	0.00e+00	1088.00
IUUC-Ptr-091533	Pan troglodytes	74.20	0.00e+00	897.00
IUUC-Pan-092675	Papio anubis	74.93	0.00e+00	852.00
IUUC-Psi-093735	Pelodiscus sinensis	55.73	2.00e-170	592.00
IUUC-Pfo-096616	Poecilia formosa	49.48	2.00e-61	230.00
IUUC-Pab-098486	Pongo abelii	74.20	0.00e+00	898.00
IUUC-Pop-099068	Populus trichocarpa	42.86	4.00e-14	70.50
IUUC-Pca-100143	Procavia capensis	72.14	4.00e-138	485.00
IUUC-Ppe-101751	Prunus persica	51.85	6.00e-13	66.60
IUUC-Pva-103151	Pteropus vampyrus	71.30	0.00e+00	817.00
IUUC-Pgr-103373	Puccinia graminis	43.28	3.00e-09	55.50
IUUC-Rno-105745	Rattus norvegicus	66.06	0.00e+00	691.00
IUUC-Sce-106438	Saccharomyces cerevisiae	34.78	9.00e-08	52.40
IUUC-Sha-106681	Sarcophilus harrisii	60.06	0.00e+00	641.00
IUUC-Smo-109601	Selaginella moellendorffii	46.15	3.00e-15	75.10
IUUC-Sar-113229	Sorex araneus	71.58	2.00e-106	380.00
IUUC-Ssc-115345	Sus scrofa	62.22	6.00e-80	291.00
IUUC-Tgu-117477	Taeniopygia guttata	60.33	3.00e-95	342.00
IUUC-Tsy-119338	Tarsius syrichta	63.15	0.00e+00	691.00
IUUC-Tni-120299	Tetraodon nigroviridis	51.92	3.00e-57	216.00
IUUC-Tae-123198	Triticum aestivum	42.39	1.00e-14	73.60
IUUC-Tur-125977	Triticum urartu	38.71	8.00e-14	70.90
IUUC-Tbe-127505	Tupaia belangeri	61.79	3.00e-92	332.00
IUUC-Ttr-128367	Tursiops truncatus	78.25	0.00e+00	783.00
IUUC-Vpa-130480	Vicugna pacos	71.87	5.00e-113	401.00
IUUC-Xma-133076	Xiphophorus maculatus	50.17	3.00e-67	249.00
IUUC-Yli-134656	Yarrowia lipolytica	46.43	1.00e-10	61.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence