iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000012807.1	ENSORLT00000016036.1	ENSORLP00000016035.1
ENSORLG00000012807.1	ENSORLT00000016038.1	ENSORLP00000016037.1
ENSORLG00000012807.1	ENSORLT00000016039.1	ENSORLP00000016038.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.70e-07	29.7	257	291

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGs.dDgtikvWDlrtgvl 35
           +  vt++a+ ++  ll+s+s  D +++vWD+    +
   Q: 257  AP-VTSIAWsPSgALLLSASpMDTSMMVWDVAAESC 291
           44.*******55566666666*********987766 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MCSLTLFPPP LPDGQTTLCE SNNELLSGNN TQDYRCTPPP PPYSVQNASP MSLHFPRESL 60
KLHSRTESSS KAAFLDHSET LWMRSAAAWR DGGLTGLLNE ITDSNSEAPE VPKWLSVGSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCGACTGG CTGAAAAGTC TGATTTGAAA TGCTACAAAA CGGGCTGTAA ATAAATAGAA 60
AAGTGACAAT TGAGACATTT GCAGAGAACG CAGTGTAAGG TAACGTTCCC TAGAGGAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR002469--Peptidase_S9B_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004244	Anolis carolinensis	57.00	2.00e-166	578.00
IUUC-Ame-011057	Astyanax mexicanus	72.23	0.00e+00	767.00
IUUC-Bdi-014681	Brachypodium distachyon	28.41	2.00e-36	146.00
IUUC-Fal-037314	Ficedula albicollis	74.36	5.00e-30	121.00
IUUC-Gmo-038799	Gadus morhua	74.30	0.00e+00	811.00
IUUC-Gga-040339	Gallus gallus	63.71	2.00e-145	508.00
IUUC-Gac-042090	Gasterosteus aculeatus	82.21	0.00e+00	856.00
IUUC-Mga-059251	Meleagris gallopavo	60.00	3.00e-140	491.00
IUUC-Mlu-068047	Myotis lucifugus	56.22	4.00e-170	591.00
IUUC-Ont-072319	Oreochromis niloticus	81.39	0.00e+00	872.00
IUUC-Obr-076080	Oryza brachyantha	28.41	1.00e-37	150.00
IUUC-Ogl-077458	Oryza glaberrima	28.70	2.00e-34	139.00
IUUC-Oin-079362	Oryza indica	26.51	2.00e-25	110.00
IUUC-Osa-086220	Oryza sativa	28.70	5.00e-35	142.00
IUUC-Pfo-096975	Poecilia formosa	81.99	0.00e+00	893.00
IUUC-Stu-112394	Solanum tuberosum	30.66	9.00e-40	157.00
IUUC-Tgu-117444	Taeniopygia guttata	72.73	5.00e-69	252.00
IUUC-Tru-117902	Takifugu rubripes	80.90	0.00e+00	823.00
IUUC-Tni-120875	Tetraodon nigroviridis	80.75	0.00e+00	837.00
IUUC-Tca-121629	Theobroma cacao	30.45	2.00e-39	156.00
IUUC-Tae-125442	Triticum aestivum	29.57	7.00e-33	134.00
IUUC-Vpa-130424	Vicugna pacos	41.80	8.00e-61	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence