iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113986

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G410200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g044480	Sb03g044480.1	Sb03g044480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	4.90e-41	140.5	6	143
UBD/Alpha-Helix/UBA	2.10e-06	28.5	158	194

Active Site

Position(s)	Description	Evidence
89	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    Rlkkelkelekdpp.egisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsilkeeekWsp 94
           R++kel+e ++d   +g+s+ ++d +++ ++  +i Gp+d+pYegg+F ++i++p  YPf+PPk++f+tk++hPn++++ G++Cl+ilk  ++Wsp
   Q: 6    RVQKELTECNRDREvSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFVTKVWHPNISSQnGAICLDILK--DQWSP 99
           89*******8876449*************************************************************999********9..***** PP
   S: 95   alsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           al++++ lls+q+ll++p p++p+++ +a+++ ++  ++  ++r
   Q: 100  ALTLKTALLSLQALLSSPAPDDPQDAVVAQQYLRDYPTFAATAR 143
           ***********************************999988875 PP

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLld 40
           e+k+++lveMGF++++++  L + +++ ++A+e L +
   Q: 158  EEKVQKLVEMGFPEDLVRSTLKSVDGDENMALEKLCS 194
           79******************************98866 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MVDVSRVQKE LTECNRDREV SGVSIALHDG ANISHLTGTI AGPADSPYEG GTFVIDIRLP 60
GGYPFEPPKM QFVTKVWHPN ISSQNGAICL DILKDQWSPA LTLKTALLSL QALLSSPAPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGCAGTCC CACCCCCACC CTCCTCGTCC TCGCATCCCA CCCCATCGCG CCGCTCCCGA 60
CGAGAGCCAG GAGGAGGTGG CGGCGGCGCC GCGAGGAAGG AAGGGATCGA TCGAGGATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR015940--UBA
IPR009060--UBA-like
IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50030--UBA
PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00627--UBA
PF00179--UQ_con

SMART

SM00165--UBA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination

KEGG

sbi:SORBI_03g044480

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000621	Aegilops tauschii	64.10	3.00e-78	283.00
IUUC-Aml-001286	Ailuropoda melanoleuca	47.98	2.00e-43	167.00
IUUC-Atr-003063	Amborella trichopoda	79.79	1.00e-76	277.00
IUUC-Apl-004122	Anas platyrhynchos	52.41	4.00e-41	159.00
IUUC-Aca-004565	Anolis carolinensis	52.41	3.00e-41	160.00
IUUC-Aly-006390	Arabidopsis lyrata	68.72	2.00e-72	264.00
IUUC-Ath-006637	Arabidopsis thaliana	63.59	8.00e-69	251.00
IUUC-Ago-007714	Ashbya gossypii	48.58	3.00e-43	167.00
IUUC-Afl-008489	Aspergillus flavus	42.86	4.00e-28	117.00
IUUC-Afu-008850	Aspergillus fumigatus	43.37	5.00e-29	120.00
IUUC-Ani-009361	Aspergillus nidulans	52.11	4.00e-28	117.00
IUUC-Ang-009548	Aspergillus niger	44.90	8.00e-30	122.00
IUUC-Aor-010105	Aspergillus oryzae	42.86	4.00e-28	117.00
IUUC-Ate-010389	Aspergillus terreus	50.34	1.00e-28	118.00
IUUC-Ame-011454	Astyanax mexicanus	48.48	6.00e-44	169.00
IUUC-Bgr-012255	Blumeria graminis	51.70	1.00e-34	138.00
IUUC-Bta-012992	Bos taurus	47.98	2.00e-43	167.00
IUUC-Bdi-015024	Brachypodium distachyon	89.74	5.00e-88	315.00
IUUC-Bol-015985	Brassica oleracea	67.18	6.00e-72	262.00
IUUC-Bra-016805	Brassica rapa	67.18	4.00e-72	262.00
IUUC-Cel-018353	Caenorhabditis elegans	48.40	2.00e-44	171.00
IUUC-Cja-019051	Callithrix jacchus	47.98	1.00e-43	167.00
IUUC-Cfa-020016	Canis familiaris	47.98	2.00e-43	167.00
IUUC-Cpo-022026	Cavia porcellus	47.98	2.00e-43	167.00
IUUC-Cre-022987	Chlamydomonas reinhardtii	63.73	6.00e-55	205.00
IUUC-Csa-023059	Chlorocebus sabaeus	47.98	2.00e-43	167.00
IUUC-Cho-024276	Choloepus hoffmanni	48.30	6.00e-30	122.00
IUUC-Cin-025598	Ciona intestinalis	50.27	2.00e-37	147.00
IUUC-Csv-025831	Ciona savignyi	48.35	2.00e-37	147.00
IUUC-Cne-027068	Cryptococcus neoformans	48.70	2.00e-45	174.00
IUUC-Dre-028139	Danio rerio	48.48	5.00e-44	169.00
IUUC-Dno-029169	Dasypus novemcinctus	46.94	2.00e-41	161.00
IUUC-Dse-031335	Dothistroma septosporum	53.47	3.00e-35	140.00
IUUC-Dme-032003	Drosophila melanogaster	49.74	4.00e-45	173.00
IUUC-Ete-032868	Echinops telfairi	45.50	9.00e-29	119.00
IUUC-Eca-033428	Equus caballus	47.98	2.00e-43	167.00
IUUC-Fca-035366	Felis catus	47.98	2.00e-43	167.00
IUUC-Fal-037016	Ficedula albicollis	47.98	2.00e-43	167.00
IUUC-Gmo-039135	Gadus morhua	48.48	9.00e-44	168.00
IUUC-Ggr-039768	Gaeumannomyces graminis	48.68	1.00e-26	112.00
IUUC-Gga-041018	Gallus gallus	47.98	2.00e-43	167.00
IUUC-Gac-041503	Gasterosteus aculeatus	48.48	4.00e-44	169.00
IUUC-Gma-042779	Glycine max	73.44	3.00e-76	276.00
IUUC-Ggo-045032	Gorilla gorilla	47.98	2.00e-43	167.00
IUUC-Hsa-046490	Homo sapiens	47.98	2.00e-43	167.00
IUUC-Hvu-047691	Hordeum vulgare	74.23	1.00e-40	158.00
IUUC-Itr-048373	Ictidomys tridecemlineatus	47.98	2.00e-43	167.00
IUUC-Kpa-049297	Komagataella pastoris	52.67	2.00e-37	147.00
IUUC-Lch-050588	Latimeria chalumnae	55.00	5.00e-38	149.00
IUUC-Lpe-051070	Leersia perrieri	91.84	7.00e-85	305.00
IUUC-Loc-052549	Lepisosteus oculatus	48.48	1.00e-43	168.00
IUUC-Lma-052949	Leptosphaeria maculans	43.46	5.00e-37	146.00
IUUC-Laf-053688	Loxodonta africana	47.74	2.00e-41	160.00
IUUC-Mcc-055606	Macaca mulatta	47.98	2.00e-43	167.00
IUUC-Mor-056946	Magnaporthe oryzae	48.68	5.00e-27	113.00
IUUC-Mpo-057441	Magnaporthe poae	45.45	4.00e-26	110.00
IUUC-Mtr-058002	Medicago truncatula	72.92	7.00e-76	275.00
IUUC-Mla-059007	Melampsora laricipopulina	51.85	4.00e-45	173.00
IUUC-Mga-059254	Meleagris gallopavo	52.41	4.00e-41	159.00
IUUC-Mvi-060346	Microbotryum violaceum	40.74	5.00e-38	149.00
IUUC-Mmr-061211	Microcebus murinus	47.98	2.00e-43	167.00
IUUC-Mdo-062458	Monodelphis domestica	47.47	2.00e-41	161.00
IUUC-Mmu-063648	Mus musculus	47.98	2.00e-43	167.00
IUUC-Mac-065447	Musa acuminata	83.59	9.00e-86	308.00
IUUC-Mpu-066407	Mustela putorius furo	47.98	5.00e-43	166.00
IUUC-Mlu-067682	Myotis lucifugus	52.41	2.00e-41	160.00
IUUC-Nfi-068517	Neosartorya fischeri	43.37	4.00e-29	120.00
IUUC-Ncr-068749	Neurospora crassa	43.90	8.00e-39	152.00
IUUC-Nle-069712	Nomascus leucogenys	52.41	6.00e-41	159.00
IUUC-Opr-070651	Ochotona princeps	47.98	2.00e-43	167.00
IUUC-Ont-071595	Oreochromis niloticus	48.48	4.00e-44	169.00
IUUC-Oan-073058	Ornithorhynchus anatinus	51.35	3.00e-34	136.00
IUUC-Ocu-074939	Oryctolagus cuniculus	47.98	2.00e-43	167.00
IUUC-Oba-075530	Oryza barthii	93.33	4.00e-87	312.00
IUUC-Obr-076838	Oryza brachyantha	92.82	2.00e-86	310.00
IUUC-Ogl-077606	Oryza glaberrima	93.33	4.00e-87	312.00
IUUC-Ogu-078238	Oryza glumaepatula	93.33	4.00e-87	312.00
IUUC-Oin-079643	Oryza indica	92.82	1.00e-86	311.00
IUUC-Olo-080743	Oryza longistaminata	90.77	2.00e-32	129.00
IUUC-Ome-081274	Oryza meridionalis	93.33	4.00e-87	312.00
IUUC-Oni-082651	Oryza nivara	93.33	4.00e-87	312.00
IUUC-Opu-083933	Oryza punctata	93.33	7.00e-87	311.00
IUUC-Oru-085054	Oryza rufipogon	92.31	4.00e-86	309.00
IUUC-Osa-085716	Oryza sativa	92.82	1.00e-86	311.00
IUUC-Ola-087043	Oryzias latipes	48.48	4.00e-44	169.00
IUUC-Olu-087846	Ostreococcus lucimarinus	54.87	9.00e-51	191.00
IUUC-Oga-088897	Otolemur garnettii	52.41	3.00e-41	160.00
IUUC-Oar-089673	Ovis aries	52.41	2.00e-41	160.00
IUUC-Ptr-091295	Pan troglodytes	47.98	2.00e-43	167.00
IUUC-Pan-092034	Papio anubis	52.41	5.00e-41	159.00
IUUC-Psi-093498	Pelodiscus sinensis	47.98	2.00e-43	167.00
IUUC-Pma-094115	Petromyzon marinus	48.48	6.00e-46	176.00
IUUC-Pno-095102	Phaeosphaeria nodorum	52.48	1.00e-36	145.00
IUUC-Ppa-095326	Physcomitrella patens	72.82	5.00e-72	262.00
IUUC-Pfo-096940	Poecilia formosa	48.48	3.00e-44	170.00
IUUC-Pab-098279	Pongo abelii	47.98	2.00e-43	167.00
IUUC-Pop-099543	Populus trichocarpa	77.44	1.00e-81	294.00
IUUC-Pca-100782	Procavia capensis	47.98	3.00e-42	163.00
IUUC-Ppe-101789	Prunus persica	73.85	3.00e-74	270.00
IUUC-Pgr-103643	Puccinia graminis	55.90	4.00e-43	167.00
IUUC-Ptt-103772	Puccinia triticina	58.33	1.00e-42	165.00
IUUC-Pte-104370	Pyrenophora teres	51.03	9.00e-37	145.00
IUUC-Pyt-104592	Pyrenophora triticirepentis	51.03	1.00e-36	145.00
IUUC-Rno-104984	Rattus norvegicus	47.98	2.00e-43	167.00
IUUC-Sce-106394	Saccharomyces cerevisiae	51.72	3.00e-41	160.00
IUUC-Sha-106624	Sarcophilus harrisii	47.47	1.00e-43	168.00
IUUC-Sja-107866	Schizosaccharomyces japonicus	48.45	1.00e-43	168.00
IUUC-Spo-108209	Schizosaccharomyces pombe	47.06	5.00e-41	159.00
IUUC-Ssl-108609	Sclerotinia sclerotiorum	54.17	1.00e-34	139.00
IUUC-Smo-109656	Selaginella moellendorffii	71.65	2.00e-69	253.00
IUUC-Sit-110639	Setaria italica	98.46	1.00e-98	351.00
IUUC-Sly-110978	Solanum lycopersicum	72.68	1.00e-76	277.00
IUUC-Stu-112088	Solanum tuberosum	73.71	1.00e-77	280.00
IUUC-Sre-115046	Sporisorium reilianum	51.56	7.00e-47	179.00
IUUC-Ssc-116314	Sus scrofa	47.98	2.00e-43	167.00
IUUC-Tgu-117427	Taeniopygia guttata	52.41	3.00e-41	160.00
IUUC-Tru-118618	Takifugu rubripes	48.22	3.00e-44	170.00
IUUC-Tsy-119208	Tarsius syrichta	47.98	1.00e-43	168.00
IUUC-Tni-119667	Tetraodon nigroviridis	48.48	5.00e-44	169.00
IUUC-Tca-121446	Theobroma cacao	72.68	1.00e-77	281.00
IUUC-Tre-122053	Trichoderma reesei	49.29	5.00e-34	136.00
IUUC-Tvi-122533	Trichoderma virens	50.35	5.00e-36	143.00
IUUC-Tae-124726	Triticum aestivum	89.80	2.00e-81	293.00
IUUC-Tme-127024	Tuber melanosporum	54.00	7.00e-40	156.00
IUUC-Tbe-127752	Tupaia belangeri	47.96	5.00e-42	162.00
IUUC-Ttr-128287	Tursiops truncatus	52.41	3.00e-41	159.00
IUUC-Uma-129512	Ustilago maydis	48.04	2.00e-47	181.00
IUUC-Vda-129947	Verticillium dahliae	43.48	9.00e-35	139.00
IUUC-Vpa-130481	Vicugna pacos	47.98	2.00e-43	167.00
IUUC-Vvi-131429	Vitis vinifera	73.33	7.00e-77	278.00
IUUC-Xtr-132710	Xenopus tropicalis	39.00	3.00e-33	133.00
IUUC-Xma-134308	Xiphophorus maculatus	48.48	7.00e-44	169.00
IUUC-Yli-134523	Yarrowia lipolytica	44.08	2.00e-41	160.00
IUUC-Zma-135733	Zea mays	92.75	4.00e-96	342.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence