iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121730

Ensembl Protein ID

EOY32655

UniProt Accession

A0A061GS77; A0A061GS77_THECC

Genbank Protein ID

EOY32655.1

Protein Name

Origin of replication complex 1B isoform 1

Genbank Nucleotide ID

CM001887

Gene Name

TCM_040678

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_040678	EOY32656	EOY32656
TCM_040678	EOY32655	EOY32655

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.60e-09	37.0	216	262

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
            C vC+++g++   ++eC++C   fH +Clk++  +e+p+ + w C  C++
   Q: 216  ECRVCFRAGRSV--MIECDDCLGGFHLKCLKPP-LKEVPEGD-WVCGFCQA 262
           5*********75..*******************.*******7.******85 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MATETPKKQL QSPRKPKQSL NNLKVQSSPL SISLSPQTPQ SLIPPQAPPR RSLRRTSLHF 60
SSTPIEDSIE YEKSDPKTPR KAVEEIGKIS GQSRKGQSHE ERVKTPKTPK IPKSKRNDEN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCTCCTTTG GCCATCTATT CTCTGCAAAA ACCTAGCCAA AATCCTTCCA TATTCACCGT 60
CCGTCCGTCC GTCCGTGAAA GTAACCATGG CAACTGAAAC TCCAAAGAAA CAGCTTCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003593--AAA+_ATPase
IPR003959--ATPase_AAA_core
IPR001025--BAH_dom
IPR027417--P-loop_NTPase
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00004--AAA
PF01426--BAH
PF00628--PHD

SMART

SM00382--AAA
SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0005524--F:ATP binding
GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001656	Ailuropoda melanoleuca	42.86	3.00e-11	62.80
IUUC-Atr-002930	Amborella trichopoda	73.49	0.00e+00	968.00
IUUC-Apl-003874	Anas platyrhynchos	42.86	2.00e-11	63.50
IUUC-Aca-004684	Anolis carolinensis	30.95	2.00e-11	63.20
IUUC-Aly-005695	Arabidopsis lyrata	70.00	0.00e+00	1032.00
IUUC-Ath-007442	Arabidopsis thaliana	71.45	0.00e+00	991.00
IUUC-Ame-010638	Astyanax mexicanus	48.28	2.00e-11	63.90
IUUC-Bta-013460	Bos taurus	42.86	3.00e-11	62.80
IUUC-Bol-016257	Brassica oleracea	65.81	0.00e+00	1009.00
IUUC-Bra-017118	Brassica rapa	70.33	0.00e+00	1003.00
IUUC-Cja-019170	Callithrix jacchus	42.86	3.00e-11	62.80
IUUC-Cfa-020760	Canis familiaris	42.86	3.00e-11	63.20
IUUC-Cre-022831	Chlamydomonas reinhardtii	40.27	7.00e-43	168.00
IUUC-Csa-023461	Chlorocebus sabaeus	42.86	2.00e-11	63.20
IUUC-Dre-027928	Danio rerio	48.28	3.00e-11	63.20
IUUC-Dno-029450	Dasypus novemcinctus	30.00	2.00e-11	63.20
IUUC-Dor-030699	Dipodomys ordii	42.86	3.00e-11	63.20
IUUC-Ete-033073	Echinops telfairi	45.71	1.00e-11	64.30
IUUC-Eca-033822	Equus caballus	43.48	4.00e-11	62.40
IUUC-Fca-035562	Felis catus	42.86	3.00e-11	63.20
IUUC-Fal-037269	Ficedula albicollis	42.86	2.00e-11	63.50
IUUC-Gga-040795	Gallus gallus	42.86	2.00e-11	63.50
IUUC-Gma-043474	Glycine max	69.90	0.00e+00	1197.00
IUUC-Ggo-045327	Gorilla gorilla	42.86	3.00e-11	63.20
IUUC-Hsa-046675	Homo sapiens	42.86	3.00e-11	62.80
IUUC-Hvu-047826	Hordeum vulgare	70.54	0.00e+00	788.00
IUUC-Itr-048946	Ictidomys tridecemlineatus	42.86	3.00e-11	62.00
IUUC-Lch-050609	Latimeria chalumnae	46.55	2.00e-11	63.20
IUUC-Lpe-051030	Leersia perrieri	71.00	0.00e+00	913.00
IUUC-Loc-052407	Lepisosteus oculatus	48.28	2.00e-11	63.50
IUUC-Laf-053876	Loxodonta africana	42.86	3.00e-11	62.80
IUUC-Mcc-054954	Macaca mulatta	42.86	3.00e-11	62.80
IUUC-Meu-056821	Macropus eugenii	43.48	5.00e-11	62.00
IUUC-Mtr-058324	Medicago truncatula	78.39	0.00e+00	1112.00
IUUC-Mga-059320	Meleagris gallopavo	42.86	2.00e-11	63.50
IUUC-Mmr-061278	Microcebus murinus	36.70	1.00e-11	64.30
IUUC-Mdo-062344	Monodelphis domestica	38.16	1.00e-11	63.50
IUUC-Mmu-063907	Mus musculus	43.48	2.00e-11	63.20
IUUC-Mac-065599	Musa acuminata	68.81	0.00e+00	1068.00
IUUC-Mpu-065839	Mustela putorius furo	42.86	3.00e-11	63.20
IUUC-Mlu-068142	Myotis lucifugus	42.86	3.00e-11	63.20
IUUC-Nle-069423	Nomascus leucogenys	42.86	3.00e-11	63.20
IUUC-Opr-070236	Ochotona princeps	43.48	2.00e-11	63.90
IUUC-Oan-073405	Ornithorhynchus anatinus	43.48	4.00e-11	62.40
IUUC-Ocu-074391	Oryctolagus cuniculus	43.48	3.00e-11	62.80
IUUC-Oba-075586	Oryza barthii	70.52	0.00e+00	896.00
IUUC-Obr-076569	Oryza brachyantha	71.26	0.00e+00	918.00
IUUC-Ogl-077597	Oryza glaberrima	71.06	0.00e+00	932.00
IUUC-Ogu-078194	Oryza glumaepatula	70.46	0.00e+00	899.00
IUUC-Olo-080478	Oryza longistaminata	69.76	0.00e+00	924.00
IUUC-Ome-081900	Oryza meridionalis	70.81	0.00e+00	932.00
IUUC-Oni-082028	Oryza nivara	66.94	0.00e+00	763.00
IUUC-Oru-085084	Oryza rufipogon	71.19	0.00e+00	904.00
IUUC-Oga-088488	Otolemur garnettii	43.48	3.00e-11	63.20
IUUC-Oar-090334	Ovis aries	42.86	3.00e-11	63.20
IUUC-Ptr-091018	Pan troglodytes	42.86	3.00e-11	62.80
IUUC-Psi-093596	Pelodiscus sinensis	46.55	3.00e-11	62.40
IUUC-Pma-094616	Petromyzon marinus	30.12	1.00e-13	69.30
IUUC-Ppa-095664	Physcomitrella patens	56.54	2.00e-132	466.00
IUUC-Pfo-097233	Poecilia formosa	30.72	8.00e-14	71.20
IUUC-Pab-097801	Pongo abelii	42.86	3.00e-11	63.20
IUUC-Pop-099691	Populus trichocarpa	72.73	0.00e+00	1197.00
IUUC-Ppe-102108	Prunus persica	70.94	0.00e+00	1170.00
IUUC-Pva-102419	Pteropus vampyrus	43.48	3.00e-11	63.20
IUUC-Rno-104900	Rattus norvegicus	43.48	2.00e-11	63.50
IUUC-Sha-107328	Sarcophilus harrisii	43.48	4.00e-11	62.80
IUUC-Smo-109122	Selaginella moellendorffii	55.80	0.00e+00	695.00
IUUC-Sit-110797	Setaria italica	70.68	0.00e+00	932.00
IUUC-Sar-113573	Sorex araneus	42.86	3.00e-11	62.80
IUUC-Ssc-115924	Sus scrofa	42.86	3.00e-11	62.80
IUUC-Tgu-117422	Taeniopygia guttata	42.86	2.00e-11	63.50
IUUC-Tsy-119092	Tarsius syrichta	42.86	6.00e-11	62.00
IUUC-Tae-122781	Triticum aestivum	68.48	0.00e+00	923.00
IUUC-Ttr-128860	Tursiops truncatus	42.86	3.00e-11	63.20
IUUC-Vvi-130915	Vitis vinifera	79.64	0.00e+00	1046.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence