iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003033

Ensembl Protein ID

ERN15090

UniProt Accession

U5CYR4; U5CYR4_AMBTC

Genbank Protein ID

ERN15090.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392510

Gene Name

AMTR_s00056p00059990

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00056p00059990	ERN15090	ERN15090

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-35	119.4	536	570
UBD/Beta-Prp	1.40e-65	221.9	256	490

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           gH+++v++l f   +   l+s+s+D+t+++WD+ +g
   Q: 536  GHEGPVHGLTFspiN-AVLASSSWDKTVRLWDVFDG 570
           8**********7553.569*************9777 PP

UBD/Beta-Prp

   S: 45   lrslsgheae........................................................vtavkfspdgkilvtgseDrtikvwdlstgkcvht 89
           + +ls+ e+                                                          ta++++   +i+v g + ++  ++ + + + +h+
   Q: 256  VDRLSDEEGYlgkrnragefqeietqeskigqqekqnsfddnircplhkgtwvlrkkyffmqphakLTACDYHAGLDIMVVGFSSGVFELYQMPDITLIHS 356
           555555555555555555555555555555555556666666666666666666666666666666999******************************** PP
   S: 90   lkghedsvlslsfspsgdklvsGs.hdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.....tgghtdsvy 184
           ++   +++++ sf++ g++l+ G  +   + vw++++++ +   ++gh   vnc++++pd+++l++G++D++++lW++++g++  tl     + ght++v+
   Q: 357  FSISREKITTASFNKHGNWLALGCaRLGQLLVWEWRSETYVF-KQQGHYFDVNCMAYSPDSQILATGADDKKIKLWNVSSGFCFVTLsengkENGHTNAVT 456
           **********************9625688999*****99998.8*********************************************999667****** PP
   S: 185  slsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
            l f++n ++l+s+sldgtv+ wdl + +  rt+
   Q: 457  ALHFTPNNRCLLSASLDGTVRAWDLIRYRNFRTF 490
           ************************9766666665 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MNYRFQNLLG APYRGGNIVF SDTTLISSIG NRISVTEVSE SKSSALPFYS PTNISRLACS 60
PDSSFIISID SLNHCVFANL RLRVPLHHLN FKEAVHAVKF SPDGVLIAFG VGKLVQVWKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTACA GGTTCCAGAA CTTGCTTGGA GCTCCTTATA GAGGAGGAAA CATAGTGTTC 60
TCAGATACAA CCCTTATATC CTCTATTGGA AACCGCATTT CTGTAACTGA AGTTTCAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0009553--P:embryo sac development
GO:0006364--P:rRNA processing

KEGG

atr:18443369

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	39.48	0.00e+00	687.00
IUUC-Apl-003219	Anas platyrhynchos	41.11	0.00e+00	703.00
IUUC-Aca-004950	Anolis carolinensis	40.52	0.00e+00	697.00
IUUC-Aly-006213	Arabidopsis lyrata	61.32	0.00e+00	1122.00
IUUC-Ath-006593	Arabidopsis thaliana	61.47	0.00e+00	1120.00
IUUC-Ago-007916	Ashbya gossypii	44.65	5.00e-159	553.00
IUUC-Acl-008225	Aspergillus clavatus	45.79	2.00e-163	568.00
IUUC-Afl-008390	Aspergillus flavus	44.02	6.00e-166	577.00
IUUC-Afu-009039	Aspergillus fumigatus	46.03	1.00e-165	575.00
IUUC-Ani-009228	Aspergillus nidulans	42.77	1.00e-138	486.00
IUUC-Ang-009663	Aspergillus niger	44.92	3.00e-157	547.00
IUUC-Aor-009923	Aspergillus oryzae	44.02	6.00e-166	577.00
IUUC-Ate-010264	Aspergillus terreus	45.79	2.00e-165	575.00
IUUC-Ame-010790	Astyanax mexicanus	34.79	3.00e-71	261.00
IUUC-Bgr-012066	Blumeria graminis	44.79	6.00e-163	566.00
IUUC-Bta-012399	Bos taurus	41.09	0.00e+00	690.00
IUUC-Bci-013757	Botrytis cinerea	46.97	4.00e-160	557.00
IUUC-Bdi-015028	Brachypodium distachyon	63.35	0.00e+00	1138.00
IUUC-Bol-016040	Brassica oleracea	61.29	0.00e+00	1123.00
IUUC-Bra-017250	Brassica rapa	61.86	0.00e+00	1142.00
IUUC-Cel-018690	Caenorhabditis elegans	30.61	5.00e-127	447.00
IUUC-Cja-019229	Callithrix jacchus	40.22	0.00e+00	689.00
IUUC-Cfa-020504	Canis familiaris	39.93	0.00e+00	691.00
IUUC-Cpo-021574	Cavia porcellus	40.22	0.00e+00	699.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	50.70	0.00e+00	642.00
IUUC-Csa-023436	Chlorocebus sabaeus	41.20	0.00e+00	696.00
IUUC-Cin-025397	Ciona intestinalis	38.88	6.00e-152	530.00
IUUC-Csv-026194	Ciona savignyi	36.74	1.00e-166	579.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	43.60	1.00e-150	526.00
IUUC-Cne-027031	Cryptococcus neoformans	41.13	0.00e+00	742.00
IUUC-Cme-027276	Cyanidioschyzon merolae	30.03	3.00e-103	368.00
IUUC-Dre-027514	Danio rerio	41.88	0.00e+00	697.00
IUUC-Dno-029191	Dasypus novemcinctus	42.27	0.00e+00	630.00
IUUC-Dor-030149	Dipodomys ordii	39.83	0.00e+00	692.00
IUUC-Dse-031260	Dothistroma septosporum	43.48	3.00e-141	494.00
IUUC-Dme-032043	Drosophila melanogaster	35.75	3.00e-163	568.00
IUUC-Ete-033102	Echinops telfairi	47.68	1.00e-148	518.00
IUUC-Eca-033223	Equus caballus	40.46	0.00e+00	708.00
IUUC-Fca-035795	Felis catus	37.43	0.00e+00	627.00
IUUC-Fal-036830	Ficedula albicollis	47.70	4.00e-172	597.00
IUUC-Fox-037835	Fusarium oxysporum	43.81	7.00e-151	526.00
IUUC-Fso-038324	Fusarium solani	44.98	2.00e-155	542.00
IUUC-Gmo-039355	Gadus morhua	40.31	0.00e+00	689.00
IUUC-Ggr-039840	Gaeumannomyces graminis	45.26	1.00e-145	509.00
IUUC-Gga-040907	Gallus gallus	48.50	4.00e-154	536.00
IUUC-Gac-042624	Gasterosteus aculeatus	39.61	0.00e+00	671.00
IUUC-Gma-043034	Glycine max	62.87	0.00e+00	1217.00
IUUC-Hsa-046145	Homo sapiens	41.20	0.00e+00	714.00
IUUC-Hvu-047416	Hordeum vulgare	62.81	0.00e+00	1125.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	42.07	0.00e+00	726.00
IUUC-Kpa-049150	Komagataella pastoris	34.93	5.00e-154	537.00
IUUC-Lch-049460	Latimeria chalumnae	39.91	5.00e-178	616.00
IUUC-Lpe-050840	Leersia perrieri	63.30	0.00e+00	1141.00
IUUC-Loc-052733	Lepisosteus oculatus	40.65	0.00e+00	706.00
IUUC-Lma-053277	Leptosphaeria maculans	47.63	3.00e-169	588.00
IUUC-Laf-054294	Loxodonta africana	40.48	0.00e+00	670.00
IUUC-Mcc-054624	Macaca mulatta	41.09	0.00e+00	714.00
IUUC-Meu-056665	Macropus eugenii	43.86	7.00e-92	330.00
IUUC-Mor-057288	Magnaporthe oryzae	44.98	1.00e-156	545.00
IUUC-Mpo-057594	Magnaporthe poae	44.59	6.00e-148	516.00
IUUC-Mtr-058700	Medicago truncatula	64.91	0.00e+00	1236.00
IUUC-Mla-058846	Melampsora laricipopulina	43.70	7.00e-159	553.00
IUUC-Mga-059207	Meleagris gallopavo	38.16	1.00e-173	602.00
IUUC-Mvi-060327	Microbotryum violaceum	47.63	2.00e-177	614.00
IUUC-Mmr-061264	Microcebus murinus	40.78	0.00e+00	674.00
IUUC-Mdo-062327	Monodelphis domestica	40.04	0.00e+00	684.00
IUUC-Mmu-063542	Mus musculus	40.22	0.00e+00	688.00
IUUC-Mac-065142	Musa acuminata	64.02	0.00e+00	1195.00
IUUC-Mpu-066098	Mustela putorius furo	40.92	0.00e+00	627.00
IUUC-Mlu-067056	Myotis lucifugus	37.89	9.00e-173	599.00
IUUC-Nfi-068323	Neosartorya fischeri	46.03	9.00e-166	576.00
IUUC-Ncr-068925	Neurospora crassa	42.69	3.00e-157	547.00
IUUC-Nle-068970	Nomascus leucogenys	40.87	0.00e+00	709.00
IUUC-Opr-070966	Ochotona princeps	51.20	2.00e-102	365.00
IUUC-Ont-071252	Oreochromis niloticus	41.74	0.00e+00	704.00
IUUC-Oan-072737	Ornithorhynchus anatinus	39.46	0.00e+00	663.00
IUUC-Oba-075794	Oryza barthii	62.24	0.00e+00	1118.00
IUUC-Obr-076617	Oryza brachyantha	63.75	0.00e+00	1161.00
IUUC-Ogl-077022	Oryza glaberrima	63.50	0.00e+00	1162.00
IUUC-Ogu-078757	Oryza glumaepatula	52.00	0.00e+00	872.00
IUUC-Oin-079813	Oryza indica	63.43	0.00e+00	1154.00
IUUC-Olo-080265	Oryza longistaminata	63.57	0.00e+00	1159.00
IUUC-Ome-081494	Oryza meridionalis	63.46	0.00e+00	1157.00
IUUC-Oni-082639	Oryza nivara	51.89	0.00e+00	867.00
IUUC-Opu-084005	Oryza punctata	64.11	0.00e+00	1172.00
IUUC-Oru-084883	Oryza rufipogon	51.67	0.00e+00	869.00
IUUC-Osa-086158	Oryza sativa	63.35	0.00e+00	1156.00
IUUC-Ola-086822	Oryzias latipes	40.41	0.00e+00	684.00
IUUC-Oga-088887	Otolemur garnettii	41.32	0.00e+00	691.00
IUUC-Oar-090110	Ovis aries	39.87	0.00e+00	649.00
IUUC-Pan-092808	Papio anubis	41.52	0.00e+00	714.00
IUUC-Psi-093954	Pelodiscus sinensis	41.02	0.00e+00	715.00
IUUC-Pno-094922	Phaeosphaeria nodorum	47.00	2.00e-169	588.00
IUUC-Ppa-095678	Physcomitrella patens	55.43	0.00e+00	941.00
IUUC-Pfo-097175	Poecilia formosa	40.98	0.00e+00	712.00
IUUC-Pab-098155	Pongo abelii	40.54	0.00e+00	701.00
IUUC-Pop-099635	Populus trichocarpa	66.41	0.00e+00	1203.00
IUUC-Pca-100947	Procavia capensis	38.08	0.00e+00	630.00
IUUC-Ppe-101552	Prunus persica	65.70	0.00e+00	1256.00
IUUC-Pva-102744	Pteropus vampyrus	37.07	3.00e-171	594.00
IUUC-Pgr-103389	Puccinia graminis	43.56	7.00e-157	546.00
IUUC-Ptt-103953	Puccinia triticina	39.48	2.00e-120	425.00
IUUC-Pte-104079	Pyrenophora teres	47.49	4.00e-166	577.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	47.00	3.00e-165	574.00
IUUC-Rno-105502	Rattus norvegicus	40.83	0.00e+00	709.00
IUUC-Sce-106390	Saccharomyces cerevisiae	45.51	6.00e-166	577.00
IUUC-Sha-107264	Sarcophilus harrisii	40.90	3.00e-89	320.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	44.92	4.00e-170	590.00
IUUC-Spo-108348	Schizosaccharomyces pombe	39.37	0.00e+00	672.00
IUUC-Smo-108982	Selaginella moellendorffii	58.03	0.00e+00	1048.00
IUUC-Sit-110304	Setaria italica	64.32	0.00e+00	1202.00
IUUC-Sly-111620	Solanum lycopersicum	76.44	0.00e+00	940.00
IUUC-Stu-112877	Solanum tuberosum	66.34	0.00e+00	1261.00
IUUC-Sbi-114702	Sorghum bicolor	64.22	0.00e+00	1181.00
IUUC-Sre-115129	Sporisorium reilianum	40.75	0.00e+00	672.00
IUUC-Ssc-115931	Sus scrofa	45.34	5.00e-98	350.00
IUUC-Tgu-116787	Taeniopygia guttata	47.87	3.00e-173	600.00
IUUC-Tru-118218	Takifugu rubripes	41.08	0.00e+00	696.00
IUUC-Tsy-119401	Tarsius syrichta	46.61	9.00e-124	436.00
IUUC-Tni-120046	Tetraodon nigroviridis	39.57	0.00e+00	658.00
IUUC-Tca-121685	Theobroma cacao	64.97	0.00e+00	1231.00
IUUC-Tre-122154	Trichoderma reesei	44.81	3.00e-160	558.00
IUUC-Tvi-122451	Trichoderma virens	44.43	2.00e-159	555.00
IUUC-Tae-125397	Triticum aestivum	71.75	0.00e+00	703.00
IUUC-Tur-126650	Triticum urartu	64.77	0.00e+00	1062.00
IUUC-Tme-127005	Tuber melanosporum	46.49	3.00e-165	574.00
IUUC-Tbe-128102	Tupaia belangeri	52.55	3.00e-103	368.00
IUUC-Ttr-128259	Tursiops truncatus	40.72	0.00e+00	684.00
IUUC-Uma-129511	Ustilago maydis	40.38	0.00e+00	677.00
IUUC-Vda-129833	Verticillium dahliae	39.87	4.00e-134	471.00
IUUC-Vvi-131572	Vitis vinifera	67.31	0.00e+00	1242.00
IUUC-Xtr-131776	Xenopus tropicalis	34.69	1.00e-61	229.00
IUUC-Xma-133887	Xiphophorus maculatus	40.43	0.00e+00	686.00
IUUC-Yli-134427	Yarrowia lipolytica	47.80	5.00e-169	587.00
IUUC-Zma-135980	Zea mays	64.86	0.00e+00	1170.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence