iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016916

Ensembl Protein ID

Bra016972.1-P

UniProt Accession

M4DKE3; M4DKE3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra016972	Bra016972.1	Bra016972.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	34.09	3.00e-157	555.00	IUUC-Hsa-046172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGRRKQPKPQ RSLGLNDEKQ VSGEEAEGSR RRKKKKESVE DIDKPYYVNI CSSSEEKQER 60
QHFDIAEVVL TNLTLIEGGS GVDCSSRFRL CNVTNFIDRI KLGYWPVLSP SDVTLELVDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTAGGA GAAAGCAACC CAAGCCGCAG CGTTCATTGG GATTGAACGA TGAAAAGCAA 60
GTCTCCGGCG AGGAGGCAGA GGGTTCTCGC CGGAGGAAGA AGAAGAAGGA GAGTGTTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50293--TPR_REGION
PS01359--ZF_PHD_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002896	Amborella trichopoda	50.88	0.00e+00	1475.00
IUUC-Apl-003428	Anas platyrhynchos	34.99	4.00e-163	569.00
IUUC-Aca-004510	Anolis carolinensis	35.06	4.00e-151	529.00
IUUC-Aly-005691	Arabidopsis lyrata	79.09	0.00e+00	2512.00
IUUC-Ath-007139	Arabidopsis thaliana	78.77	0.00e+00	2552.00
IUUC-Acl-008380	Aspergillus clavatus	28.44	2.00e-30	128.00
IUUC-Afu-008890	Aspergillus fumigatus	33.10	2.00e-30	128.00
IUUC-Ang-009583	Aspergillus niger	33.69	7.00e-32	133.00
IUUC-Aor-009893	Aspergillus oryzae	33.57	2.00e-31	132.00
IUUC-Ate-010385	Aspergillus terreus	34.81	1.00e-38	155.00
IUUC-Ame-011882	Astyanax mexicanus	34.39	7.00e-164	572.00
IUUC-Bgr-012295	Blumeria graminis	30.29	1.00e-31	132.00
IUUC-Bta-012528	Bos taurus	33.54	2.00e-159	557.00
IUUC-Bci-013701	Botrytis cinerea	38.16	3.00e-34	140.00
IUUC-Bdi-014034	Brachypodium distachyon	48.33	0.00e+00	1330.00
IUUC-Bol-015555	Brassica oleracea	90.97	0.00e+00	2848.00
IUUC-Cja-019391	Callithrix jacchus	33.95	3.00e-159	556.00
IUUC-Cfa-020732	Canis familiaris	34.45	6.00e-161	562.00
IUUC-Cpo-021641	Cavia porcellus	34.46	3.00e-161	563.00
IUUC-Csa-023937	Chlorocebus sabaeus	34.48	2.00e-162	567.00
IUUC-Cho-024617	Choloepus hoffmanni	45.74	3.00e-39	157.00
IUUC-Cgl-026624	Colletotrichum gloeosporioides	29.27	5.00e-34	140.00
IUUC-Cme-027178	Cyanidioschyzon merolae	30.35	7.00e-126	445.00
IUUC-Dre-028441	Danio rerio	34.80	1.00e-170	594.00
IUUC-Dno-029395	Dasypus novemcinctus	34.40	4.00e-158	552.00
IUUC-Dse-031372	Dothistroma septosporum	31.27	2.00e-41	164.00
IUUC-Dme-031785	Drosophila melanogaster	30.78	5.00e-57	216.00
IUUC-Ete-032502	Echinops telfairi	37.86	3.00e-78	287.00
IUUC-Eca-033455	Equus caballus	31.03	1.00e-128	454.00
IUUC-Eeu-034956	Erinaceus europaeus	31.78	5.00e-137	482.00
IUUC-Fca-035984	Felis catus	33.94	5.00e-104	372.00
IUUC-Fal-036811	Ficedula albicollis	34.61	2.00e-162	566.00
IUUC-Fso-038224	Fusarium solani	33.33	7.00e-38	152.00
IUUC-Gmo-039126	Gadus morhua	35.56	2.00e-167	583.00
IUUC-Ggr-040102	Gaeumannomyces graminis	29.44	8.00e-30	126.00
IUUC-Gga-041238	Gallus gallus	34.85	5.00e-166	579.00
IUUC-Gac-041614	Gasterosteus aculeatus	34.12	2.00e-163	570.00
IUUC-Gma-043259	Glycine max	56.97	0.00e+00	1740.00
IUUC-Ggo-045213	Gorilla gorilla	33.89	2.00e-154	540.00
IUUC-Hsa-046172	Homo sapiens	34.56	4.00e-162	565.00
IUUC-Hvu-047286	Hordeum vulgare	45.07	2.00e-108	385.00
IUUC-Itr-048880	Ictidomys tridecemlineatus	34.54	8.00e-162	565.00
IUUC-Kpa-049196	Komagataella pastoris	28.42	2.00e-26	115.00
IUUC-Lch-050648	Latimeria chalumnae	32.14	1.00e-132	468.00
IUUC-Lpe-050871	Leersia perrieri	45.84	0.00e+00	1315.00
IUUC-Loc-051862	Lepisosteus oculatus	34.41	5.00e-159	555.00
IUUC-Lma-053266	Leptosphaeria maculans	29.28	3.00e-31	130.00
IUUC-Laf-053851	Loxodonta africana	34.32	6.00e-159	555.00
IUUC-Mcc-055066	Macaca mulatta	34.40	4.00e-162	565.00
IUUC-Meu-056104	Macropus eugenii	33.33	8.00e-61	229.00
IUUC-Mor-057226	Magnaporthe oryzae	30.61	5.00e-35	143.00
IUUC-Mpo-057528	Magnaporthe poae	29.86	8.00e-29	123.00
IUUC-Mtr-058336	Medicago truncatula	55.21	0.00e+00	1624.00
IUUC-Mga-059775	Meleagris gallopavo	35.10	6.00e-166	578.00
IUUC-Mvi-060213	Microbotryum violaceum	29.55	5.00e-28	120.00
IUUC-Mdo-062943	Monodelphis domestica	34.90	4.00e-166	579.00
IUUC-Mmu-064115	Mus musculus	34.29	1.00e-160	560.00
IUUC-Mac-064445	Musa acuminata	50.91	0.00e+00	686.00
IUUC-Mpu-066850	Mustela putorius furo	34.20	9.00e-161	561.00
IUUC-Mlu-067610	Myotis lucifugus	33.74	2.00e-158	553.00
IUUC-Nfi-068264	Neosartorya fischeri	33.80	4.00e-32	134.00
IUUC-Ncr-068745	Neurospora crassa	31.89	2.00e-34	141.00
IUUC-Nle-070055	Nomascus leucogenys	34.56	1.00e-162	567.00
IUUC-Ont-071526	Oreochromis niloticus	35.02	1.00e-166	580.00
IUUC-Oan-073609	Ornithorhynchus anatinus	32.61	6.00e-103	368.00
IUUC-Ocu-074042	Oryctolagus cuniculus	34.31	9.00e-162	564.00
IUUC-Oba-075121	Oryza barthii	46.98	0.00e+00	1310.00
IUUC-Obr-076312	Oryza brachyantha	47.26	0.00e+00	1369.00
IUUC-Ogl-077560	Oryza glaberrima	46.91	0.00e+00	1301.00
IUUC-Ogu-078746	Oryza glumaepatula	45.91	0.00e+00	1238.00
IUUC-Oin-080153	Oryza indica	48.27	0.00e+00	922.00
IUUC-Olo-080436	Oryza longistaminata	48.10	0.00e+00	1299.00
IUUC-Oni-082845	Oryza nivara	46.73	0.00e+00	1304.00
IUUC-Opu-083321	Oryza punctata	48.05	0.00e+00	1311.00
IUUC-Oru-084329	Oryza rufipogon	46.98	0.00e+00	1315.00
IUUC-Osa-085508	Oryza sativa	56.28	2.00e-65	241.00
IUUC-Olu-087671	Ostreococcus lucimarinus	30.80	2.00e-165	576.00
IUUC-Oar-090005	Ovis aries	33.62	3.00e-160	560.00
IUUC-Pan-092723	Papio anubis	33.56	8.00e-147	515.00
IUUC-Psi-093870	Pelodiscus sinensis	34.87	8.00e-166	578.00
IUUC-Pma-094750	Petromyzon marinus	42.24	4.00e-48	184.00
IUUC-Pno-095005	Phaeosphaeria nodorum	31.23	1.00e-37	152.00
IUUC-Ppa-095619	Physcomitrella patens	38.36	9.00e-134	471.00
IUUC-Pfo-096833	Poecilia formosa	34.32	5.00e-164	572.00
IUUC-Pab-098544	Pongo abelii	34.65	1.00e-162	568.00
IUUC-Pop-099540	Populus trichocarpa	56.93	0.00e+00	1412.00
IUUC-Ppe-102038	Prunus persica	56.52	0.00e+00	1803.00
IUUC-Pte-104081	Pyrenophora teres	30.48	1.00e-35	145.00
IUUC-Pyt-104477	Pyrenophora triticirepentis	30.06	5.00e-36	147.00
IUUC-Rno-104959	Rattus norvegicus	34.29	7.00e-161	561.00
IUUC-Sha-107078	Sarcophilus harrisii	34.79	1.00e-166	581.00
IUUC-Sja-107755	Schizosaccharomyces japonicus	28.16	3.00e-34	140.00
IUUC-Spo-108132	Schizosaccharomyces pombe	32.40	1.00e-38	155.00
IUUC-Ssl-108615	Sclerotinia sclerotiorum	33.45	4.00e-30	127.00
IUUC-Smo-108991	Selaginella moellendorffii	39.59	0.00e+00	911.00
IUUC-Sit-110047	Setaria italica	41.58	0.00e+00	1047.00
IUUC-Sly-111232	Solanum lycopersicum	52.97	0.00e+00	1060.00
IUUC-Sar-113738	Sorex araneus	32.99	2.00e-153	536.00
IUUC-Sbi-114485	Sorghum bicolor	43.82	0.00e+00	704.00
IUUC-Sre-115189	Sporisorium reilianum	32.52	3.00e-26	114.00
IUUC-Ssc-116362	Sus scrofa	33.89	6.00e-159	555.00
IUUC-Tgu-117188	Taeniopygia guttata	34.40	2.00e-162	567.00
IUUC-Tru-117637	Takifugu rubripes	34.26	2.00e-161	563.00
IUUC-Tni-119701	Tetraodon nigroviridis	34.35	9.00e-163	568.00
IUUC-Tca-121831	Theobroma cacao	57.96	0.00e+00	1824.00
IUUC-Tre-122005	Trichoderma reesei	32.23	1.00e-26	115.00
IUUC-Tvi-122328	Trichoderma virens	29.07	8.00e-28	119.00
IUUC-Tae-123569	Triticum aestivum	48.39	0.00e+00	1313.00
IUUC-Tur-125964	Triticum urartu	48.60	0.00e+00	1261.00
IUUC-Tbe-127799	Tupaia belangeri	33.80	4.00e-52	200.00
IUUC-Uma-129442	Ustilago maydis	32.86	1.00e-27	119.00
IUUC-Vda-129795	Verticillium dahliae	43.88	1.00e-25	112.00
IUUC-Vvi-131682	Vitis vinifera	54.34	0.00e+00	1704.00
IUUC-Xtr-132232	Xenopus tropicalis	33.01	8.00e-127	448.00
IUUC-Xma-133291	Xiphophorus maculatus	34.55	2.00e-158	553.00
IUUC-Zma-135327	Zea mays	47.97	0.00e+00	861.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence