iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037453

Ensembl Protein ID

ENSFALP00000014414.1

UniProt Accession

U3KHB0; U3KHB0_FICAL

Genbank Protein ID

ENSFALP00000014414

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000672

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000013811.1	ENSFALT00000014474.1	ENSFALP00000014414.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-14	53.6	51	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++ vt++++ ++ ++lv+++ D + +vW l
   Q: 51   HNGQVTGIDWaPEsNRLVTCGTDRNAYVWTL 81
           9**********888***************75 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MAYHSFLLEP ISCHAWNKDR TQIALCPNNH EVHIYRKDGA KWSKVHELKE HNGQVTGIDW 60
APESNRLVTC GTDRNAYVWT LKGNVWKPTL VILRINRAAR CVKWSPKENK FAVGSGSRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAGGATCTT GTATCCAAAT CCTGCAGCTG AGAAGAACTC CTGCCCTCAC TGCACGGGAC 60
CCCAGCGTGC TGCGACATCA CTCAGAGAGG GAAGGGGTGA GTGCATCCAG GCGGCAATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	44.48	1.00e-63	236.00
IUUC-Aml-001709	Ailuropoda melanoleuca	86.77	0.00e+00	679.00
IUUC-Aly-006568	Arabidopsis lyrata	41.08	4.00e-81	294.00
IUUC-Ath-006683	Arabidopsis thaliana	41.89	2.00e-81	295.00
IUUC-Ame-011512	Astyanax mexicanus	82.16	0.00e+00	659.00
IUUC-Bta-012442	Bos taurus	86.33	0.00e+00	672.00
IUUC-Bol-016274	Brassica oleracea	41.94	8.00e-83	300.00
IUUC-Cja-019899	Callithrix jacchus	87.73	0.00e+00	689.00
IUUC-Cfa-020067	Canis familiaris	87.17	0.00e+00	681.00
IUUC-Cpo-022461	Cavia porcellus	87.97	0.00e+00	686.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	35.71	3.00e-35	140.00
IUUC-Csa-023277	Chlorocebus sabaeus	84.22	0.00e+00	657.00
IUUC-Dre-028141	Danio rerio	81.08	0.00e+00	647.00
IUUC-Dor-030559	Dipodomys ordii	87.97	0.00e+00	689.00
IUUC-Ete-032299	Echinops telfairi	86.63	0.00e+00	686.00
IUUC-Eca-033593	Equus caballus	86.40	0.00e+00	673.00
IUUC-Fca-036254	Felis catus	87.97	0.00e+00	687.00
IUUC-Gmo-038471	Gadus morhua	72.19	9.00e-165	572.00
IUUC-Gga-040898	Gallus gallus	95.96	0.00e+00	737.00
IUUC-Gac-042236	Gasterosteus aculeatus	76.12	6.00e-179	619.00
IUUC-Gma-042803	Glycine max	41.98	2.00e-80	292.00
IUUC-Ggo-045355	Gorilla gorilla	72.80	6.00e-156	543.00
IUUC-Hsa-046623	Homo sapiens	87.70	0.00e+00	685.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	88.24	0.00e+00	691.00
IUUC-Lch-049679	Latimeria chalumnae	83.78	0.00e+00	665.00
IUUC-Lpe-050869	Leersia perrieri	41.39	6.00e-78	284.00
IUUC-Loc-052140	Lepisosteus oculatus	84.05	0.00e+00	650.00
IUUC-Laf-054287	Loxodonta africana	84.39	0.00e+00	656.00
IUUC-Meu-056302	Macropus eugenii	90.57	0.00e+00	706.00
IUUC-Mtr-057659	Medicago truncatula	41.60	9.00e-84	303.00
IUUC-Mga-059279	Meleagris gallopavo	95.96	0.00e+00	737.00
IUUC-Mmr-060752	Microcebus murinus	87.60	0.00e+00	673.00
IUUC-Mdo-062836	Monodelphis domestica	85.44	0.00e+00	662.00
IUUC-Mmu-064099	Mus musculus	86.24	0.00e+00	677.00
IUUC-Mac-064632	Musa acuminata	42.66	3.00e-81	295.00
IUUC-Mpu-066247	Mustela putorius furo	86.90	0.00e+00	670.00
IUUC-Mlu-067571	Myotis lucifugus	88.20	0.00e+00	693.00
IUUC-Nle-069492	Nomascus leucogenys	75.67	4.00e-159	553.00
IUUC-Ont-071316	Oreochromis niloticus	78.74	1.00e-179	622.00
IUUC-Oan-072692	Ornithorhynchus anatinus	89.76	0.00e+00	702.00
IUUC-Ocu-074187	Oryctolagus cuniculus	85.83	0.00e+00	667.00
IUUC-Oba-075379	Oryza barthii	42.35	1.00e-78	286.00
IUUC-Obr-076404	Oryza brachyantha	41.92	4.00e-79	288.00
IUUC-Ogl-077409	Oryza glaberrima	39.95	1.00e-72	266.00
IUUC-Ogu-078759	Oryza glumaepatula	42.35	1.00e-78	286.00
IUUC-Oin-079118	Oryza indica	42.39	2.00e-79	289.00
IUUC-Olo-081055	Oryza longistaminata	43.81	3.00e-70	258.00
IUUC-Ome-081281	Oryza meridionalis	42.35	1.00e-78	286.00
IUUC-Oni-083043	Oryza nivara	42.35	1.00e-78	286.00
IUUC-Oru-084839	Oryza rufipogon	42.35	1.00e-78	286.00
IUUC-Osa-085377	Oryza sativa	42.39	3.00e-79	288.00
IUUC-Oga-088610	Otolemur garnettii	87.43	0.00e+00	683.00
IUUC-Oar-089639	Ovis aries	85.52	0.00e+00	659.00
IUUC-Ptr-091023	Pan troglodytes	87.70	0.00e+00	685.00
IUUC-Pan-091727	Papio anubis	88.50	0.00e+00	689.00
IUUC-Pfo-097058	Poecilia formosa	76.90	5.00e-179	619.00
IUUC-Pab-098238	Pongo abelii	87.43	0.00e+00	687.00
IUUC-Pca-100580	Procavia capensis	85.83	0.00e+00	668.00
IUUC-Ppe-101681	Prunus persica	42.11	4.00e-81	294.00
IUUC-Pva-102928	Pteropus vampyrus	84.22	0.00e+00	647.00
IUUC-Rno-104846	Rattus norvegicus	86.63	0.00e+00	682.00
IUUC-Sit-110150	Setaria italica	42.43	1.00e-79	290.00
IUUC-Sly-111048	Solanum lycopersicum	42.31	3.00e-79	288.00
IUUC-Sar-113404	Sorex araneus	92.05	7.00e-135	473.00
IUUC-Sbi-114685	Sorghum bicolor	42.59	2.00e-77	282.00
IUUC-Tru-118106	Takifugu rubripes	76.58	1.00e-180	625.00
IUUC-Tni-120079	Tetraodon nigroviridis	77.63	0.00e+00	629.00
IUUC-Tae-125810	Triticum aestivum	37.71	6.00e-71	261.00
IUUC-Tur-126640	Triticum urartu	39.39	4.00e-68	251.00
IUUC-Ttr-128698	Tursiops truncatus	87.17	0.00e+00	682.00
IUUC-Vvi-131647	Vitis vinifera	43.09	5.00e-81	294.00
IUUC-Xtr-131893	Xenopus tropicalis	85.71	0.00e+00	676.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence