iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049679

Ensembl Protein ID

ENSLACP00000013447.2

UniProt Accession

H3AUX6; H3AUX6_LATCH

Genbank Protein ID

ENSLACP00000013447

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01039303

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000011837.2	ENSLACT00000013543.2	ENSLACP00000013447.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-16	57.8	50	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++ vt++++ ++ +++v+++ D + +vW l
   Q: 50   GHSGQVTGIDWaPEsNRIVTCGTDRNAYVWTL 81
           8***********888***************75 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSYHSFLLEP ISCHAWNKDK TQLAFCPNNH DVHIYSKDGT KWTKIHELKG HSGQVTGIDW 60
APESNRIVTC GTDRNAYVWT LKGNVWKPTL VILRINRAAR CVKWSPKENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGGAAGTGA AACAGTTATG AAGAAGTGGA AAAATACTCT TTTTCTAACT TAGAGCTCAC 60
ATTAGATGTT CATGTTGACT GCGCAGAGTC CATGAACTGA AGATTTTCGT TTTTTTTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

lcm:102360990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	43.93	2.00e-63	236.00
IUUC-Aml-001709	Ailuropoda melanoleuca	77.87	0.00e+00	626.00
IUUC-Atr-002844	Amborella trichopoda	46.67	1.00e-52	199.00
IUUC-Aly-005532	Arabidopsis lyrata	42.01	2.00e-79	289.00
IUUC-Ath-006683	Arabidopsis thaliana	42.28	6.00e-80	290.00
IUUC-Ame-011512	Astyanax mexicanus	81.79	0.00e+00	652.00
IUUC-Bta-012442	Bos taurus	77.63	1.00e-179	622.00
IUUC-Bdi-014632	Brachypodium distachyon	41.14	2.00e-76	278.00
IUUC-Bol-016274	Brassica oleracea	41.78	3.00e-81	295.00
IUUC-Bra-016790	Brassica rapa	40.81	8.00e-80	290.00
IUUC-Cja-019899	Callithrix jacchus	79.57	0.00e+00	637.00
IUUC-Cfa-020067	Canis familiaris	78.71	0.00e+00	629.00
IUUC-Cpo-022461	Cavia porcellus	78.71	0.00e+00	632.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	35.71	5.00e-36	143.00
IUUC-Csa-023277	Chlorocebus sabaeus	74.66	3.00e-173	600.00
IUUC-Dre-028141	Danio rerio	79.89	0.00e+00	640.00
IUUC-Dor-030559	Dipodomys ordii	78.71	0.00e+00	635.00
IUUC-Ete-032299	Echinops telfairi	79.25	0.00e+00	639.00
IUUC-Eca-033593	Equus caballus	77.42	3.00e-180	623.00
IUUC-Fca-036254	Felis catus	78.98	0.00e+00	633.00
IUUC-Fal-037453	Ficedula albicollis	83.78	0.00e+00	665.00
IUUC-Gmo-038471	Gadus morhua	74.19	6.00e-166	576.00
IUUC-Gga-040898	Gallus gallus	83.15	0.00e+00	662.00
IUUC-Gac-042236	Gasterosteus aculeatus	74.14	1.00e-172	598.00
IUUC-Gma-042803	Glycine max	41.18	9.00e-80	290.00
IUUC-Ggo-045355	Gorilla gorilla	63.17	1.00e-139	489.00
IUUC-Hsa-046623	Homo sapiens	78.44	0.00e+00	631.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	78.98	0.00e+00	638.00
IUUC-Lpe-050869	Leersia perrieri	41.62	2.00e-78	285.00
IUUC-Loc-052140	Lepisosteus oculatus	83.20	0.00e+00	640.00
IUUC-Laf-054287	Loxodonta africana	76.00	7.00e-175	606.00
IUUC-Meu-056302	Macropus eugenii	82.61	0.00e+00	659.00
IUUC-Mtr-057659	Medicago truncatula	41.98	2.00e-83	302.00
IUUC-Mga-059279	Meleagris gallopavo	83.15	0.00e+00	662.00
IUUC-Mmr-060752	Microcebus murinus	78.39	3.00e-180	624.00
IUUC-Mdo-062836	Monodelphis domestica	78.53	1.00e-178	618.00
IUUC-Mmu-064099	Mus musculus	77.60	2.00e-180	624.00
IUUC-Mac-064632	Musa acuminata	41.53	2.00e-80	292.00
IUUC-Mpu-066247	Mustela putorius furo	77.90	8.00e-179	619.00
IUUC-Mlu-067571	Myotis lucifugus	80.27	0.00e+00	644.00
IUUC-Ont-071316	Oreochromis niloticus	77.84	5.00e-176	610.00
IUUC-Oan-072692	Ornithorhynchus anatinus	80.98	0.00e+00	648.00
IUUC-Ocu-074187	Oryctolagus cuniculus	77.69	7.00e-177	612.00
IUUC-Oba-075379	Oryza barthii	42.31	4.00e-79	288.00
IUUC-Obr-076404	Oryza brachyantha	42.38	3.00e-79	288.00
IUUC-Ogl-077409	Oryza glaberrima	39.84	1.00e-72	266.00
IUUC-Ogu-078759	Oryza glumaepatula	42.31	4.00e-79	288.00
IUUC-Oin-079118	Oryza indica	42.31	1.00e-79	289.00
IUUC-Olo-081055	Oryza longistaminata	41.77	1.00e-69	256.00
IUUC-Ome-081281	Oryza meridionalis	42.31	5.00e-79	288.00
IUUC-Oni-083043	Oryza nivara	42.31	4.00e-79	288.00
IUUC-Opu-083392	Oryza punctata	33.24	4.00e-52	198.00
IUUC-Oru-084839	Oryza rufipogon	42.31	4.00e-79	288.00
IUUC-Osa-085377	Oryza sativa	42.31	2.00e-79	289.00
IUUC-Oga-088610	Otolemur garnettii	79.25	0.00e+00	635.00
IUUC-Oar-089639	Ovis aries	78.17	3.00e-178	617.00
IUUC-Ptr-091023	Pan troglodytes	78.44	0.00e+00	631.00
IUUC-Pan-091727	Papio anubis	78.98	0.00e+00	635.00
IUUC-Ppa-095738	Physcomitrella patens	41.64	6.00e-82	297.00
IUUC-Pfo-097058	Poecilia formosa	75.79	8.00e-174	602.00
IUUC-Pab-098238	Pongo abelii	78.71	0.00e+00	636.00
IUUC-Pop-098954	Populus trichocarpa	35.11	3.00e-41	161.00
IUUC-Pca-100580	Procavia capensis	78.17	1.00e-179	621.00
IUUC-Ppe-101681	Prunus persica	42.35	1.00e-81	296.00
IUUC-Pva-102928	Pteropus vampyrus	75.47	1.00e-171	595.00
IUUC-Rno-104846	Rattus norvegicus	78.71	0.00e+00	633.00
IUUC-Smo-108836	Selaginella moellendorffii	42.90	4.00e-80	291.00
IUUC-Sit-110150	Setaria italica	41.14	1.00e-78	286.00
IUUC-Sly-111048	Solanum lycopersicum	41.94	8.00e-78	283.00
IUUC-Sbi-114685	Sorghum bicolor	42.31	5.00e-77	281.00
IUUC-Tru-118106	Takifugu rubripes	75.20	3.00e-176	610.00
IUUC-Tni-120079	Tetraodon nigroviridis	75.73	4.00e-177	613.00
IUUC-Tca-121645	Theobroma cacao	41.46	9.00e-79	286.00
IUUC-Tae-123562	Triticum aestivum	40.58	2.00e-70	258.00
IUUC-Tur-126640	Triticum urartu	39.06	4.00e-68	251.00
IUUC-Ttr-128698	Tursiops truncatus	78.98	0.00e+00	632.00
IUUC-Vvi-131647	Vitis vinifera	41.35	1.00e-79	290.00
IUUC-Xtr-131893	Xenopus tropicalis	81.25	0.00e+00	644.00
IUUC-Xma-134089	Xiphophorus maculatus	75.79	3.00e-174	603.00
IUUC-Zma-135615	Zea mays	40.98	5.00e-79	287.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence