iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026604

Ensembl Protein ID

ELA29769

UniProt Accession

L2FTL6; L2FTL6_COLGN

Genbank Protein ID

ELA29769.1

Protein Name

WD domain-containing protein

Genbank Nucleotide ID

KB020831

Gene Name

CGGC5_9857

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_9857	ELA29769	ELA29769

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-17	60.5	388	414

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sdtllvsGsdDgtikvWDl 30
           sv+  a+ s+++++++s+D tik++D+
   Q: 388  SVSHAAWsSGGHIATSSYDDTIKIYDF 414
           477789*666****************7 PP

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MPIKKLKQEP EEKPMSAFER KRLENIANNQ TILKDLAKTS SKLMPEKPKA APKPRPAVKR 60
EAAPAAPAGP VRRSARVAGL DADNETLKRK YEVELEDQAA KEKAKRTRVS GDLKLGDIAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGATCA AGAAGCTCAA GCAAGAGCCG GAGGAGAAGC CTATGAGCGC CTTCGAGCGC 60
AAGAGGTTGG AGAATATTGC CAATAACCAG ACTATTTTGA AGGACTTGGC CAAGACTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033052--Cmr1/WDR76
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000790--C:nuclear chromatin
GO:0034399--C:nuclear periphery
GO:0003677--F:DNA binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:2000001--P:regulation of DNA damage checkpoint

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000625	Aegilops tauschii	28.80	6.00e-18	82.80
IUUC-Aml-002203	Ailuropoda melanoleuca	23.44	2.00e-12	65.10
IUUC-Atr-002605	Amborella trichopoda	24.21	1.00e-22	99.40
IUUC-Apl-003441	Anas platyrhynchos	24.52	3.00e-22	97.80
IUUC-Aca-004241	Anolis carolinensis	27.20	5.00e-33	133.00
IUUC-Aly-005444	Arabidopsis lyrata	28.02	2.00e-30	125.00
IUUC-Ath-007550	Arabidopsis thaliana	27.43	7.00e-27	113.00
IUUC-Ago-007715	Ashbya gossypii	31.31	8.00e-54	202.00
IUUC-Acl-008370	Aspergillus clavatus	48.11	8.00e-132	462.00
IUUC-Afl-008586	Aspergillus flavus	48.85	2.00e-129	454.00
IUUC-Afu-008907	Aspergillus fumigatus	48.38	9.00e-127	445.00
IUUC-Ani-009415	Aspergillus nidulans	48.47	3.00e-125	440.00
IUUC-Ang-009597	Aspergillus niger	41.41	3.00e-66	244.00
IUUC-Aor-010197	Aspergillus oryzae	48.66	5.00e-129	452.00
IUUC-Ate-010280	Aspergillus terreus	46.88	4.00e-129	452.00
IUUC-Ame-010817	Astyanax mexicanus	22.86	3.00e-10	58.20
IUUC-Bgr-012236	Blumeria graminis	54.58	3.00e-151	526.00
IUUC-Bta-013059	Bos taurus	25.07	6.00e-27	114.00
IUUC-Bci-013796	Botrytis cinerea	57.72	4.00e-164	569.00
IUUC-Bdi-015040	Brachypodium distachyon	28.53	2.00e-26	112.00
IUUC-Bol-015934	Brassica oleracea	27.66	3.00e-25	107.00
IUUC-Bra-018032	Brassica rapa	28.53	1.00e-25	109.00
IUUC-Cja-019043	Callithrix jacchus	24.38	5.00e-30	124.00
IUUC-Cfa-021103	Canis familiaris	25.27	5.00e-27	114.00
IUUC-Cpo-021508	Cavia porcellus	24.40	1.00e-24	105.00
IUUC-Cre-022967	Chlamydomonas reinhardtii	26.74	6.00e-11	60.80
IUUC-Csa-023555	Chlorocebus sabaeus	25.21	8.00e-29	119.00
IUUC-Cin-025651	Ciona intestinalis	25.00	4.00e-25	107.00
IUUC-Cne-027093	Cryptococcus neoformans	27.27	5.00e-36	144.00
IUUC-Cme-027238	Cyanidioschyzon merolae	27.66	5.00e-25	107.00
IUUC-Dre-027441	Danio rerio	24.72	2.00e-27	115.00
IUUC-Dno-029575	Dasypus novemcinctus	24.12	5.00e-27	114.00
IUUC-Dor-030554	Dipodomys ordii	26.27	7.00e-29	119.00
IUUC-Dse-031299	Dothistroma septosporum	49.52	4.00e-139	486.00
IUUC-Ete-032716	Echinops telfairi	25.73	4.00e-16	77.80
IUUC-Eca-034027	Equus caballus	24.91	3.00e-14	71.60
IUUC-Eeu-035234	Erinaceus europaeus	25.79	6.00e-12	64.30
IUUC-Fca-035892	Felis catus	23.39	7.00e-27	113.00
IUUC-Fal-036986	Ficedula albicollis	23.74	1.00e-21	95.50
IUUC-Fox-037750	Fusarium oxysporum	65.36	0.00e+00	638.00
IUUC-Fso-038198	Fusarium solani	61.42	3.00e-161	560.00
IUUC-Gmo-039683	Gadus morhua	27.37	1.00e-15	75.90
IUUC-Gga-040479	Gallus gallus	26.14	3.00e-19	87.80
IUUC-Gac-042043	Gasterosteus aculeatus	27.68	2.00e-22	98.60
IUUC-Gma-043913	Glycine max	25.79	1.00e-35	142.00
IUUC-Ggo-045290	Gorilla gorilla	23.82	1.00e-28	119.00
IUUC-Hsa-047021	Homo sapiens	24.10	2.00e-28	118.00
IUUC-Hvu-047193	Hordeum vulgare	27.76	1.00e-26	112.00
IUUC-Itr-047914	Ictidomys tridecemlineatus	24.52	9.00e-29	120.00
IUUC-Kpa-049275	Komagataella pastoris	33.21	9.00e-75	272.00
IUUC-Lch-049718	Latimeria chalumnae	25.90	1.00e-30	126.00
IUUC-Lpe-051708	Leersia perrieri	28.93	6.00e-23	100.00
IUUC-Loc-052565	Lepisosteus oculatus	25.15	3.00e-32	130.00
IUUC-Lma-053276	Leptosphaeria maculans	49.32	2.00e-138	484.00
IUUC-Laf-053970	Loxodonta africana	25.73	1.00e-30	126.00
IUUC-Mcc-054740	Macaca mulatta	24.93	1.00e-28	119.00
IUUC-Meu-056546	Macropus eugenii	27.27	1.00e-14	72.80
IUUC-Mtr-058451	Medicago truncatula	27.20	5.00e-36	143.00
IUUC-Mla-058906	Melampsora laricipopulina	29.76	1.00e-48	185.00
IUUC-Mga-059328	Meleagris gallopavo	26.17	5.00e-23	100.00
IUUC-Mvi-060555	Microbotryum violaceum	33.42	3.00e-40	158.00
IUUC-Mmr-061520	Microcebus murinus	24.12	1.00e-31	129.00
IUUC-Mdo-062812	Monodelphis domestica	24.90	6.00e-35	140.00
IUUC-Mmu-064011	Mus musculus	26.13	1.00e-27	115.00
IUUC-Mac-065598	Musa acuminata	21.37	1.00e-14	72.80
IUUC-Mpu-066486	Mustela putorius furo	25.45	2.00e-26	112.00
IUUC-Mlu-067721	Myotis lucifugus	23.44	1.00e-15	75.90
IUUC-Nfi-068314	Neosartorya fischeri	48.38	7.00e-125	439.00
IUUC-Ncr-068896	Neurospora crassa	62.48	3.00e-164	569.00
IUUC-Nle-069369	Nomascus leucogenys	24.10	1.00e-28	119.00
IUUC-Opr-070975	Ochotona princeps	25.00	1.00e-28	119.00
IUUC-Ont-072528	Oreochromis niloticus	26.44	1.00e-27	115.00
IUUC-Oan-072955	Ornithorhynchus anatinus	26.75	7.00e-23	99.80
IUUC-Ocu-074561	Oryctolagus cuniculus	25.55	2.00e-27	115.00
IUUC-Oba-074982	Oryza barthii	26.74	4.00e-27	114.00
IUUC-Obr-076551	Oryza brachyantha	28.30	3.00e-21	93.60
IUUC-Ogl-077685	Oryza glaberrima	27.78	8.00e-27	113.00
IUUC-Ogu-078331	Oryza glumaepatula	27.78	9.00e-27	112.00
IUUC-Oin-079507	Oryza indica	27.57	2.00e-25	108.00
IUUC-Olo-080604	Oryza longistaminata	27.14	5.00e-23	100.00
IUUC-Ome-081816	Oryza meridionalis	27.70	2.00e-26	111.00
IUUC-Oni-082051	Oryza nivara	27.78	6.00e-27	113.00
IUUC-Opu-083372	Oryza punctata	28.36	2.00e-26	111.00
IUUC-Oru-084578	Oryza rufipogon	27.78	9.00e-27	112.00
IUUC-Osa-086177	Oryza sativa	27.78	9.00e-27	112.00
IUUC-Ola-087208	Oryzias latipes	27.03	8.00e-25	106.00
IUUC-Olu-087680	Ostreococcus lucimarinus	26.39	4.00e-24	104.00
IUUC-Oga-088104	Otolemur garnettii	25.48	5.00e-30	124.00
IUUC-Oar-090157	Ovis aries	24.53	1.00e-26	112.00
IUUC-Ptr-091615	Pan troglodytes	23.82	5.00e-28	117.00
IUUC-Pan-092212	Papio anubis	25.14	1.00e-28	119.00
IUUC-Psi-092950	Pelodiscus sinensis	24.02	6.00e-28	117.00
IUUC-Pma-094474	Petromyzon marinus	25.00	7.00e-09	53.10
IUUC-Pno-094824	Phaeosphaeria nodorum	53.01	6.00e-150	522.00
IUUC-Ppa-095414	Physcomitrella patens	23.16	3.00e-18	85.10
IUUC-Pfo-096922	Poecilia formosa	26.59	6.00e-35	140.00
IUUC-Pab-097591	Pongo abelii	24.10	1.00e-28	119.00
IUUC-Pop-099337	Populus trichocarpa	25.63	3.00e-31	127.00
IUUC-Pca-101025	Procavia capensis	24.46	5.00e-26	110.00
IUUC-Ppe-101256	Prunus persica	26.15	1.00e-19	89.40
IUUC-Pva-102453	Pteropus vampyrus	25.45	7.00e-26	110.00
IUUC-Pgr-103436	Puccinia graminis	29.21	3.00e-48	184.00
IUUC-Ptt-103899	Puccinia triticina	34.58	2.00e-38	151.00
IUUC-Pte-104258	Pyrenophora teres	49.81	9.00e-142	494.00
IUUC-Pyt-104625	Pyrenophora triticirepentis	50.58	3.00e-143	499.00
IUUC-Rno-104843	Rattus norvegicus	25.00	1.00e-24	106.00
IUUC-Sce-106189	Saccharomyces cerevisiae	36.69	3.00e-51	194.00
IUUC-Sha-106672	Sarcophilus harrisii	25.39	3.00e-34	137.00
IUUC-Smo-109176	Selaginella moellendorffii	26.18	3.00e-25	107.00
IUUC-Sit-109704	Setaria italica	29.31	1.00e-33	135.00
IUUC-Sly-111853	Solanum lycopersicum	25.33	5.00e-27	113.00
IUUC-Stu-112482	Solanum tuberosum	25.66	9.00e-28	116.00
IUUC-Sar-113272	Sorex araneus	23.53	8.00e-12	62.80
IUUC-Sbi-114517	Sorghum bicolor	28.83	9.00e-27	113.00
IUUC-Sre-114960	Sporisorium reilianum	27.25	8.00e-28	116.00
IUUC-Ssc-115568	Sus scrofa	24.65	7.00e-27	113.00
IUUC-Tgu-116602	Taeniopygia guttata	24.73	6.00e-15	73.60
IUUC-Tru-118698	Takifugu rubripes	25.40	2.00e-06	45.10
IUUC-Tsy-119027	Tarsius syrichta	26.44	2.00e-12	64.70
IUUC-Tni-120358	Tetraodon nigroviridis	25.83	1.00e-31	129.00
IUUC-Tca-121273	Theobroma cacao	27.57	2.00e-28	118.00
IUUC-Tre-121932	Trichoderma reesei	61.99	4.00e-172	595.00
IUUC-Tvi-122567	Trichoderma virens	61.45	0.00e+00	633.00
IUUC-Tae-123506	Triticum aestivum	27.59	2.00e-26	111.00
IUUC-Tur-125970	Triticum urartu	27.75	9.00e-17	79.30
IUUC-Tme-126958	Tuber melanosporum	42.04	4.00e-88	316.00
IUUC-Tbe-127425	Tupaia belangeri	26.73	6.00e-28	117.00
IUUC-Ttr-129123	Tursiops truncatus	24.92	8.00e-25	107.00
IUUC-Uma-129495	Ustilago maydis	27.62	1.00e-25	109.00
IUUC-Vda-129981	Verticillium dahliae	60.82	7.00e-165	572.00
IUUC-Vpa-130437	Vicugna pacos	24.86	2.00e-28	118.00
IUUC-Vvi-131430	Vitis vinifera	26.32	9.00e-27	112.00
IUUC-Xtr-132670	Xenopus tropicalis	26.05	2.00e-33	135.00
IUUC-Xma-133375	Xiphophorus maculatus	25.95	3.00e-29	121.00
IUUC-Yli-134341	Yarrowia lipolytica	33.69	6.00e-73	266.00
IUUC-Zma-135413	Zea mays	28.16	5.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence