iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Fca-035994

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AANG02024057

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFCAG00000003469.3	ENSFCAT00000003469.3	ENSFCAP00000003199.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-45	150.3	589	628
UBD/Beta-Prp	2.50e-94	315.8	550	710

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +v c++   d tl+++Gs D ++k+W l+ g++ ks
   Q: 589  GHKLPVICMDIsYDgTLIATGSADRNVKIWGLDFGDCHKS 628
           789999999888556*********************9875 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           ++v++ v +sp+++lla++  d t+k++ v+t k++ sl+gh+ +v ++++s dg +++tgs Dr++k+w l+ g+c  +l +h+dsv+
   Q: 550  EDVLC-VSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGTLIATGSADRNVKIWGLDFGDCHKSLFAHDDSVM 637
           34555.*********************************************************************************** PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkll 172
            l+f p+++ + ++++dr i+ wd ++ + ++ tl+gh++ ++c++v+p+g+++vs+s D+ +rlW   ++ l+
   Q: 638  YLQFVPKSHLFFTAGKDRKIKQWDADKFEHIQ-TLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWERTREPLI 710
           ********************************.*********************************98555444 PP

Organism

Felis catus

Protein Sequence
(Fasta)

MGLTKQYLRY VASAVFGLIG SQKGNIVFVT LRGEKGRYVA VPACEHVFIW DLRKGEKILI 60
LQGLKQEVTC LCPSPDGLHL AVGYEDGSIR IFSLLSGEGN VTFNGHKAAI TSLKYDQLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGTCCAAG CGGCCCGGAT CCTCGTGGAG GCCCAGGTGG GTAAGGTGGG GGCCAGGCGT 60
TCCAACCCCG TTCCTCGCGG TCCTGGCTGA GGCCTTCGGG GCACCAGCCC CAGATGAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	39.32	3.00e-148	518.00
IUUC-Aml-001245	Ailuropoda melanoleuca	96.82	0.00e+00	1586.00
IUUC-Atr-002700	Amborella trichopoda	40.92	3.00e-169	588.00
IUUC-Apl-004164	Anas platyrhynchos	79.94	0.00e+00	1082.00
IUUC-Aca-004765	Anolis carolinensis	75.41	0.00e+00	1306.00
IUUC-Aly-006503	Arabidopsis lyrata	41.43	6.00e-169	587.00
IUUC-Ath-006848	Arabidopsis thaliana	41.16	7.00e-171	594.00
IUUC-Ago-007909	Ashbya gossypii	36.72	1.00e-143	504.00
IUUC-Acl-008238	Aspergillus clavatus	39.91	1.00e-175	610.00
IUUC-Afl-008544	Aspergillus flavus	40.11	1.00e-170	593.00
IUUC-Afu-008868	Aspergillus fumigatus	40.11	2.00e-173	603.00
IUUC-Ani-009367	Aspergillus nidulans	39.51	5.00e-169	588.00
IUUC-Ang-009732	Aspergillus niger	40.72	8.00e-174	604.00
IUUC-Aor-010140	Aspergillus oryzae	40.18	4.00e-171	595.00
IUUC-Ate-010572	Aspergillus terreus	39.73	2.00e-170	593.00
IUUC-Ame-010956	Astyanax mexicanus	62.70	0.00e+00	1032.00
IUUC-Bgr-012296	Blumeria graminis	38.44	4.00e-163	568.00
IUUC-Bta-012716	Bos taurus	93.65	0.00e+00	1586.00
IUUC-Bci-013699	Botrytis cinerea	37.68	4.00e-157	548.00
IUUC-Bdi-014525	Brachypodium distachyon	38.26	1.00e-151	530.00
IUUC-Bol-015117	Brassica oleracea	40.87	7.00e-164	571.00
IUUC-Bra-016869	Brassica rapa	40.87	5.00e-166	578.00
IUUC-Cel-018570	Caenorhabditis elegans	34.54	7.00e-126	444.00
IUUC-Cja-019425	Callithrix jacchus	92.25	0.00e+00	1535.00
IUUC-Cfa-020787	Canis familiaris	96.47	0.00e+00	1613.00
IUUC-Cpo-021729	Cavia porcellus	94.21	0.00e+00	1077.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	44.80	2.00e-102	366.00
IUUC-Csa-024098	Chlorocebus sabaeus	93.53	0.00e+00	1555.00
IUUC-Cho-024495	Choloepus hoffmanni	78.24	0.00e+00	945.00
IUUC-Cin-025245	Ciona intestinalis	48.80	2.00e-169	589.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	40.53	3.00e-162	566.00
IUUC-Cne-026835	Cryptococcus neoformans	46.83	1.00e-120	427.00
IUUC-Cme-027162	Cyanidioschyzon merolae	27.82	9.00e-38	152.00
IUUC-Dre-027874	Danio rerio	71.04	0.00e+00	1206.00
IUUC-Dno-028905	Dasypus novemcinctus	92.24	0.00e+00	1559.00
IUUC-Dor-030383	Dipodomys ordii	87.82	0.00e+00	812.00
IUUC-Dse-031297	Dothistroma septosporum	37.83	1.00e-158	553.00
IUUC-Dme-031956	Drosophila melanogaster	42.91	0.00e+00	636.00
IUUC-Ete-032608	Echinops telfairi	82.36	0.00e+00	932.00
IUUC-Eca-034181	Equus caballus	93.65	0.00e+00	1543.00
IUUC-Eeu-034495	Erinaceus europaeus	93.06	0.00e+00	1556.00
IUUC-Fal-036611	Ficedula albicollis	78.12	0.00e+00	1255.00
IUUC-Fox-037807	Fusarium oxysporum	39.64	1.00e-167	583.00
IUUC-Fso-038090	Fusarium solani	39.60	4.00e-164	572.00
IUUC-Gmo-039018	Gadus morhua	63.57	0.00e+00	692.00
IUUC-Ggr-039748	Gaeumannomyces graminis	39.01	2.00e-167	583.00
IUUC-Gga-040707	Gallus gallus	79.88	0.00e+00	1273.00
IUUC-Gac-042334	Gasterosteus aculeatus	63.92	0.00e+00	679.00
IUUC-Gma-043860	Glycine max	40.18	1.00e-163	570.00
IUUC-Ggo-045334	Gorilla gorilla	93.54	0.00e+00	1514.00
IUUC-Hsa-046996	Homo sapiens	93.65	0.00e+00	1516.00
IUUC-Hvu-047381	Hordeum vulgare	33.44	3.00e-88	318.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	92.35	0.00e+00	1524.00
IUUC-Kpa-049185	Komagataella pastoris	36.36	4.00e-148	518.00
IUUC-Lch-050098	Latimeria chalumnae	68.92	0.00e+00	1085.00
IUUC-Lpe-050710	Leersia perrieri	37.77	5.00e-159	555.00
IUUC-Loc-052745	Lepisosteus oculatus	69.04	0.00e+00	1126.00
IUUC-Lma-053104	Leptosphaeria maculans	38.80	2.00e-169	590.00
IUUC-Laf-054395	Loxodonta africana	91.65	0.00e+00	1524.00
IUUC-Mcc-055077	Macaca mulatta	93.41	0.00e+00	1548.00
IUUC-Meu-056418	Macropus eugenii	82.18	0.00e+00	645.00
IUUC-Mor-057031	Magnaporthe oryzae	39.52	1.00e-153	536.00
IUUC-Mpo-057420	Magnaporthe poae	39.36	3.00e-165	575.00
IUUC-Mtr-057838	Medicago truncatula	39.43	6.00e-172	597.00
IUUC-Mla-058854	Melampsora laricipopulina	37.58	4.00e-151	528.00
IUUC-Mga-060120	Meleagris gallopavo	74.82	0.00e+00	1177.00
IUUC-Mvi-060407	Microbotryum violaceum	47.13	1.00e-129	457.00
IUUC-Mmr-060635	Microcebus murinus	91.54	0.00e+00	1509.00
IUUC-Mdo-063023	Monodelphis domestica	87.53	0.00e+00	1503.00
IUUC-Mmu-064103	Mus musculus	90.25	0.00e+00	1506.00
IUUC-Mac-065569	Musa acuminata	38.38	5.00e-162	565.00
IUUC-Mpu-066462	Mustela putorius furo	96.12	0.00e+00	1609.00
IUUC-Mlu-067894	Myotis lucifugus	93.65	0.00e+00	1576.00
IUUC-Nfi-068321	Neosartorya fischeri	39.89	6.00e-173	601.00
IUUC-Ncr-068661	Neurospora crassa	39.36	2.00e-165	576.00
IUUC-Nle-069409	Nomascus leucogenys	93.41	0.00e+00	1529.00
IUUC-Opr-070445	Ochotona princeps	83.92	0.00e+00	1407.00
IUUC-Ont-072339	Oreochromis niloticus	70.77	0.00e+00	1175.00
IUUC-Oan-073688	Ornithorhynchus anatinus	77.88	0.00e+00	1280.00
IUUC-Ocu-074227	Oryctolagus cuniculus	93.29	0.00e+00	1576.00
IUUC-Oba-075635	Oryza barthii	37.46	3.00e-151	529.00
IUUC-Obr-076897	Oryza brachyantha	38.60	3.00e-160	558.00
IUUC-Ogl-077555	Oryza glaberrima	37.34	8.00e-151	527.00
IUUC-Ogu-078724	Oryza glumaepatula	37.46	3.00e-152	532.00
IUUC-Oin-080030	Oryza indica	37.14	3.00e-151	529.00
IUUC-Olo-080687	Oryza longistaminata	35.31	3.00e-139	489.00
IUUC-Ome-081867	Oryza meridionalis	37.46	2.00e-151	529.00
IUUC-Oni-082559	Oryza nivara	37.14	3.00e-151	529.00
IUUC-Opu-083332	Oryza punctata	39.29	4.00e-147	515.00
IUUC-Oru-084455	Oryza rufipogon	37.14	2.00e-151	529.00
IUUC-Osa-085793	Oryza sativa	37.14	2.00e-151	529.00
IUUC-Ola-087395	Oryzias latipes	69.20	0.00e+00	1087.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.81	1.00e-151	530.00
IUUC-Oga-088574	Otolemur garnettii	93.18	0.00e+00	1570.00
IUUC-Oar-089453	Ovis aries	91.90	0.00e+00	1568.00
IUUC-Ptr-090694	Pan troglodytes	93.53	0.00e+00	1514.00
IUUC-Pan-092420	Papio anubis	93.19	0.00e+00	1543.00
IUUC-Psi-093683	Pelodiscus sinensis	83.88	0.00e+00	1410.00
IUUC-Pma-094197	Petromyzon marinus	57.89	2.00e-71	261.00
IUUC-Pno-094783	Phaeosphaeria nodorum	38.18	1.00e-167	583.00
IUUC-Ppa-095208	Physcomitrella patens	40.21	1.00e-170	593.00
IUUC-Pfo-096299	Poecilia formosa	69.28	0.00e+00	1172.00
IUUC-Pab-098706	Pongo abelii	93.53	0.00e+00	1522.00
IUUC-Pop-099275	Populus trichocarpa	39.19	4.00e-162	565.00
IUUC-Pca-100796	Procavia capensis	76.17	0.00e+00	1144.00
IUUC-Ppe-101861	Prunus persica	41.34	3.00e-173	602.00
IUUC-Pva-103241	Pteropus vampyrus	91.84	0.00e+00	1394.00
IUUC-Pgr-103432	Puccinia graminis	46.20	9.00e-114	404.00
IUUC-Ptt-103742	Puccinia triticina	43.86	3.00e-102	366.00
IUUC-Pte-104069	Pyrenophora teres	38.48	1.00e-157	550.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	38.07	2.00e-165	576.00
IUUC-Rno-105219	Rattus norvegicus	89.66	0.00e+00	1465.00
IUUC-Sce-106271	Saccharomyces cerevisiae	44.15	1.00e-117	417.00
IUUC-Sha-107550	Sarcophilus harrisii	86.90	0.00e+00	1491.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	37.74	6.00e-150	525.00
IUUC-Spo-108239	Schizosaccharomyces pombe	38.98	1.00e-164	573.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	39.13	8.00e-164	571.00
IUUC-Smo-108974	Selaginella moellendorffii	40.58	1.00e-165	577.00
IUUC-Sit-110000	Setaria italica	39.11	1.00e-154	540.00
IUUC-Sly-111595	Solanum lycopersicum	39.86	2.00e-171	596.00
IUUC-Stu-112516	Solanum tuberosum	39.84	2.00e-171	596.00
IUUC-Sar-113195	Sorex araneus	81.46	0.00e+00	1206.00
IUUC-Sbi-114465	Sorghum bicolor	37.54	1.00e-158	553.00
IUUC-Sre-115006	Sporisorium reilianum	35.52	2.00e-141	497.00
IUUC-Ssc-115929	Sus scrofa	93.41	0.00e+00	1524.00
IUUC-Tgu-117282	Taeniopygia guttata	78.24	0.00e+00	1257.00
IUUC-Tru-118406	Takifugu rubripes	69.48	0.00e+00	1128.00
IUUC-Tsy-119170	Tarsius syrichta	90.73	0.00e+00	1534.00
IUUC-Tni-119721	Tetraodon nigroviridis	67.56	0.00e+00	1099.00
IUUC-Tca-121761	Theobroma cacao	40.35	2.00e-171	596.00
IUUC-Tre-121908	Trichoderma reesei	38.24	2.00e-162	566.00
IUUC-Tvi-122547	Trichoderma virens	39.11	2.00e-164	573.00
IUUC-Tae-125496	Triticum aestivum	38.47	4.00e-158	552.00
IUUC-Tur-126811	Triticum urartu	40.61	8.00e-158	551.00
IUUC-Tme-126987	Tuber melanosporum	40.00	7.00e-172	597.00
IUUC-Tbe-127315	Tupaia belangeri	95.33	0.00e+00	759.00
IUUC-Ttr-129165	Tursiops truncatus	83.76	0.00e+00	1317.00
IUUC-Uma-129651	Ustilago maydis	35.02	1.00e-140	494.00
IUUC-Vda-129973	Verticillium dahliae	40.16	1.00e-158	553.00
IUUC-Vpa-130163	Vicugna pacos	83.37	0.00e+00	731.00
IUUC-Vvi-131402	Vitis vinifera	38.30	1.00e-168	587.00
IUUC-Xtr-132296	Xenopus tropicalis	73.48	0.00e+00	1238.00
IUUC-Xma-133028	Xiphophorus maculatus	69.25	0.00e+00	1178.00
IUUC-Yli-134484	Yarrowia lipolytica	39.15	2.00e-149	523.00
IUUC-Zma-135938	Zea mays	36.73	8.00e-157	547.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence