iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000028391.16	ENSMUST00000120095.7	ENSMUSP00000112719.1
ENSMUSG00000028391.16	ENSMUST00000132263.7	ENSMUSP00000120684.1
ENSMUSG00000028391.16	ENSMUST00000107452.7	ENSMUSP00000103076.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	TRANSFAC	RepTar	RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-26	92.6	144	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+  vt+la  +d   l++Gs+D+++ +WD+ tg ++
   Q: 144  GHAMVVTGLAVsPDsSQLCTGSRDNSLLLWDVGTGQCV 181
           78889*******99999*****************9997 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MLLLDGQLKP ALPQKVFCRL WAVMGKLQSK LRHSTYLYSR PDGIIEERVQ TKAPQEYIPV 60
HVDTVSVIAT LNSDLCISGG KDKTAVAYNW KTGRMVKRFT GHEREITKIA CIPKANQFFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGGGCGGAG GCGCGGGAAC CTGTGGAAGC TAAGGATGCC TGCTACCCGT GCTTTCGGGC 60
CTCGGTGCTA GCCCACCGGT GGGTATGGAG CCCGAGGTGG GAGAGAGGGA GCATCGGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

mmu:71354

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001303	Ailuropoda melanoleuca	78.20	2.00e-163	568.00
IUUC-Apl-003536	Anas platyrhynchos	58.31	2.00e-128	452.00
IUUC-Ame-010794	Astyanax mexicanus	51.16	3.00e-92	331.00
IUUC-Bta-013442	Bos taurus	82.02	0.00e+00	634.00
IUUC-Cel-018695	Caenorhabditis elegans	34.65	1.00e-34	140.00
IUUC-Cja-019562	Callithrix jacchus	81.74	0.00e+00	635.00
IUUC-Cfa-021028	Canis familiaris	79.81	9.00e-98	348.00
IUUC-Cpo-022343	Cavia porcellus	80.93	1.00e-170	592.00
IUUC-Csa-023542	Chlorocebus sabaeus	83.11	0.00e+00	647.00
IUUC-Cho-024760	Choloepus hoffmanni	61.58	5.00e-57	214.00
IUUC-Dre-027522	Danio rerio	55.23	1.00e-112	399.00
IUUC-Dno-029896	Dasypus novemcinctus	84.98	8.00e-119	419.00
IUUC-Dor-030765	Dipodomys ordii	75.48	6.00e-166	576.00
IUUC-Ete-033063	Echinops telfairi	66.40	2.00e-129	455.00
IUUC-Eca-033609	Equus caballus	82.29	5.00e-177	613.00
IUUC-Eeu-034966	Erinaceus europaeus	79.83	2.00e-175	608.00
IUUC-Fca-036069	Felis catus	83.10	0.00e+00	625.00
IUUC-Fal-036667	Ficedula albicollis	59.59	1.00e-120	426.00
IUUC-Gmo-039012	Gadus morhua	50.57	1.00e-104	372.00
IUUC-Gga-040523	Gallus gallus	60.17	9.00e-123	432.00
IUUC-Gac-041287	Gasterosteus aculeatus	50.27	1.00e-107	383.00
IUUC-Ggo-045296	Gorilla gorilla	83.11	0.00e+00	643.00
IUUC-Hsa-046410	Homo sapiens	83.11	0.00e+00	640.00
IUUC-Itr-049046	Ictidomys tridecemlineatus	82.57	4.00e-178	617.00
IUUC-Lch-049661	Latimeria chalumnae	62.03	1.00e-127	449.00
IUUC-Loc-051770	Lepisosteus oculatus	56.28	3.00e-78	284.00
IUUC-Laf-053619	Loxodonta africana	81.97	3.00e-180	624.00
IUUC-Mcc-054764	Macaca mulatta	82.83	0.00e+00	644.00
IUUC-Meu-056252	Macropus eugenii	70.27	3.00e-105	374.00
IUUC-Mga-059846	Meleagris gallopavo	59.59	2.00e-111	395.00
IUUC-Mmr-060750	Microcebus murinus	83.92	5.00e-179	620.00
IUUC-Mdo-062994	Monodelphis domestica	67.44	3.00e-146	511.00
IUUC-Mpu-066603	Mustela putorius furo	81.40	2.00e-173	601.00
IUUC-Mlu-067615	Myotis lucifugus	80.65	6.00e-171	593.00
IUUC-Nle-070126	Nomascus leucogenys	83.38	0.00e+00	645.00
IUUC-Opr-071069	Ochotona princeps	74.66	2.00e-163	568.00
IUUC-Ont-072042	Oreochromis niloticus	52.51	5.00e-111	394.00
IUUC-Oan-073655	Ornithorhynchus anatinus	74.58	9.00e-80	288.00
IUUC-Ocu-074554	Oryctolagus cuniculus	80.93	8.00e-162	563.00
IUUC-Ola-087524	Oryzias latipes	54.38	8.00e-109	386.00
IUUC-Oga-088877	Otolemur garnettii	73.10	3.00e-157	547.00
IUUC-Oar-090049	Ovis aries	81.74	0.00e+00	636.00
IUUC-Ptr-091038	Pan troglodytes	82.83	0.00e+00	639.00
IUUC-Pan-092272	Papio anubis	82.83	0.00e+00	644.00
IUUC-Psi-093373	Pelodiscus sinensis	58.67	2.00e-117	415.00
IUUC-Pfo-096647	Poecilia formosa	53.45	3.00e-108	384.00
IUUC-Pab-097879	Pongo abelii	78.20	1.00e-170	592.00
IUUC-Pca-100192	Procavia capensis	78.47	9.00e-165	572.00
IUUC-Pva-102832	Pteropus vampyrus	84.47	3.00e-180	624.00
IUUC-Rno-105940	Rattus norvegicus	93.46	0.00e+00	687.00
IUUC-Sha-106913	Sarcophilus harrisii	68.31	7.00e-139	486.00
IUUC-Sar-113560	Sorex araneus	53.24	4.00e-84	305.00
IUUC-Ssc-115648	Sus scrofa	82.56	5.00e-175	606.00
IUUC-Tgu-117359	Taeniopygia guttata	62.22	6.00e-120	423.00
IUUC-Tru-117707	Takifugu rubripes	48.41	7.00e-107	380.00
IUUC-Tsy-119614	Tarsius syrichta	61.58	5.00e-127	447.00
IUUC-Tni-120445	Tetraodon nigroviridis	49.86	7.00e-108	383.00
IUUC-Tbe-128051	Tupaia belangeri	58.21	2.00e-87	315.00
IUUC-Ttr-129199	Tursiops truncatus	82.24	2.00e-173	601.00
IUUC-Vpa-130211	Vicugna pacos	85.21	2.00e-138	484.00
IUUC-Xtr-132403	Xenopus tropicalis	53.33	1.00e-110	392.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence