iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005924

Ensembl Protein ID

Al_scaffold_0006_2333

UniProt Accession

D7M338; D7M338_ARALL

Genbank Protein ID

EFH48368.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348718

Gene Name

UBQ3; ARALYDRAFT_662268

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0006_2333	Al_scaffold_0006_2333	Al_scaffold_0006_2333

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.70e-204	662.6	230	305
ULD/UDP/UBQ/UBQ_PIM	1.10e-139	455.3	306	378

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 230  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ gvpp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 306  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 378
           99********************************************************************986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MMQIFVKTLT GKTITLEVES SDTIDNVKAK IQDKEGIPLD QQRLIFAGKQ LEDGRTLADY 60
NIQKESTLHL VLRLRGGMQI FVKTLTGKTI TLEVESSDTI DNVKAKIQDK EGIPPDQQRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTAGTGT CTTGTGACAA AGGAGGATGT GTGGGTGGTG GAGTCTGGTG ATATAGGTTA 60
ATCAAATCAA TATATATATA TATGCAGGAA GATTGTAATA AACTTTAGTA AATTATTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm

KEGG

aly:ARALYDRAFT_662268

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mpu-066106	Mustela putorius furo	80.66	4.00e-135	473.00
IUUC-Pfo-096371	Poecilia formosa	87.45	2.00e-126	444.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence