iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021403

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02012959

Gene Name

POC1A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000006740.3	ENSCPOT00000006809.2	ENSCPOP00000006072.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-58	190.2	159	197
UBD/Beta-Prp	7.40e-73	245.3	28	198

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H ++v+c +f +d +l+vs+sdD+t+k+WD ++  +++s
   Q: 159  HINWVRCARFsPDgRLIVSASDDKTVKLWDKTSRECVHS 197
           999********999******************9999886 PP

UBD/Beta-Prp

   S: 88   htlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtlt 176
           +++kgh d v++++fs +++ l+sGs d+ +++w+++ +   +  ++gh+++v+cv+++p+g ll+sGs D+tvr+W  + +   + ++
   Q: 28   RHFKGHRDAVTCVDFSLNTKQLASGSMDSCLMIWHMKPQARAY-RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTMFR 115
           6899*********************************999999.9***************99***************766666666667 PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
             ht  v+s+ f+s+g++lv++s+d+t+k+w+ ++++ + +l  h ++v++ rfsp++ ++vs+s+D+++++Wd++s+++++++
   Q: 116  A-HTATVRSVHFSSDGQSLVTASDDKTIKVWSTHRQRFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 198
           6.*****************************************************************************99986 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

LGPGAALSSP RFTHLTLTVL QEDPSLERHF KGHRDAVTCV DFSLNTKQLA SGSMDSCLMI 60
WHMKPQARAY RFTGHKDAVT CVNFSPSGHL LASGSRDKTV RIWVPNVKGE STMFRAHTAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGGCCCTG GGGCAGCACT TTCCTCACCC AGGTTCACCC ATTTGACCCT GACTGTCTTG 60
CAGGAGGACC CTTCACTCGA GAGGCATTTT AAGGGTCACC GTGATGCCGT CACGTGTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0003431--P:growth plate cartilage chondrocyte development
GO:0007052--P:mitotic spindle organization
GO:1905515--P:non-motile cilium assembly
GO:0010825--P:positive regulation of centrosome duplication
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001513	Ailuropoda melanoleuca	91.00	0.00e+00	754.00
IUUC-Apl-003466	Anas platyrhynchos	78.25	0.00e+00	657.00
IUUC-Aca-004323	Anolis carolinensis	71.00	3.00e-180	624.00
IUUC-Bta-012484	Bos taurus	90.02	0.00e+00	763.00
IUUC-Cja-019067	Callithrix jacchus	88.24	0.00e+00	789.00
IUUC-Cfa-020439	Canis familiaris	91.27	0.00e+00	766.00
IUUC-Cre-022724	Chlamydomonas reinhardtii	50.89	6.00e-112	397.00
IUUC-Csa-023479	Chlorocebus sabaeus	89.97	0.00e+00	679.00
IUUC-Cho-024354	Choloepus hoffmanni	86.82	3.00e-114	403.00
IUUC-Cin-025258	Ciona intestinalis	71.75	8.00e-143	500.00
IUUC-Csv-025955	Ciona savignyi	64.12	1.00e-146	512.00
IUUC-Dno-029467	Dasypus novemcinctus	79.00	4.00e-126	444.00
IUUC-Dor-030399	Dipodomys ordii	90.05	0.00e+00	761.00
IUUC-Dme-032182	Drosophila melanogaster	46.69	9.00e-81	293.00
IUUC-Eca-034425	Equus caballus	89.34	0.00e+00	759.00
IUUC-Eeu-034607	Erinaceus europaeus	78.05	6.00e-180	623.00
IUUC-Fca-035627	Felis catus	89.34	0.00e+00	760.00
IUUC-Fal-037381	Ficedula albicollis	75.62	0.00e+00	640.00
IUUC-Gmo-038489	Gadus morhua	68.59	4.00e-162	563.00
IUUC-Gga-040559	Gallus gallus	75.38	0.00e+00	627.00
IUUC-Gac-041453	Gasterosteus aculeatus	68.55	1.00e-170	592.00
IUUC-Ggo-044773	Gorilla gorilla	90.77	0.00e+00	744.00
IUUC-Hsa-045823	Homo sapiens	91.27	0.00e+00	750.00
IUUC-Itr-048560	Ictidomys tridecemlineatus	92.04	0.00e+00	782.00
IUUC-Lch-050558	Latimeria chalumnae	69.21	2.00e-177	615.00
IUUC-Loc-052836	Lepisosteus oculatus	68.13	3.00e-177	614.00
IUUC-Laf-053974	Loxodonta africana	81.66	0.00e+00	665.00
IUUC-Mcc-055494	Macaca mulatta	88.28	0.00e+00	746.00
IUUC-Meu-056646	Macropus eugenii	75.00	7.00e-128	450.00
IUUC-Mga-059295	Meleagris gallopavo	68.47	2.00e-175	608.00
IUUC-Mmr-061040	Microcebus murinus	91.27	0.00e+00	769.00
IUUC-Mdo-062519	Monodelphis domestica	77.03	2.00e-176	611.00
IUUC-Mmu-063759	Mus musculus	92.67	2.00e-170	592.00
IUUC-Mpu-066442	Mustela putorius furo	91.02	0.00e+00	744.00
IUUC-Mlu-068163	Myotis lucifugus	86.81	0.00e+00	753.00
IUUC-Nle-070160	Nomascus leucogenys	90.52	0.00e+00	746.00
IUUC-Opr-070192	Ochotona princeps	88.44	0.00e+00	666.00
IUUC-Ont-072539	Oreochromis niloticus	74.68	7.00e-150	523.00
IUUC-Ocu-074624	Oryctolagus cuniculus	89.43	0.00e+00	701.00
IUUC-Ola-087268	Oryzias latipes	61.83	3.00e-159	554.00
IUUC-Oga-088964	Otolemur garnettii	83.86	0.00e+00	719.00
IUUC-Oar-090202	Ovis aries	88.63	0.00e+00	752.00
IUUC-Ptr-091164	Pan troglodytes	90.39	0.00e+00	753.00
IUUC-Pan-092805	Papio anubis	89.43	0.00e+00	674.00
IUUC-Psi-093359	Pelodiscus sinensis	84.24	1.00e-164	572.00
IUUC-Pma-094425	Petromyzon marinus	62.42	2.00e-164	572.00
IUUC-Ppa-095677	Physcomitrella patens	46.38	9.00e-82	296.00
IUUC-Pfo-096741	Poecilia formosa	72.52	7.00e-141	493.00
IUUC-Pab-098376	Pongo abelii	91.77	0.00e+00	784.00
IUUC-Pca-101122	Procavia capensis	88.28	0.00e+00	739.00
IUUC-Pva-103104	Pteropus vampyrus	70.07	1.00e-160	558.00
IUUC-Rno-105282	Rattus norvegicus	85.71	0.00e+00	649.00
IUUC-Sha-106840	Sarcophilus harrisii	82.70	2.00e-120	424.00
IUUC-Smo-108731	Selaginella moellendorffii	43.97	9.00e-78	283.00
IUUC-Sar-113262	Sorex araneus	64.84	5.00e-144	503.00
IUUC-Ssc-115392	Sus scrofa	90.56	0.00e+00	653.00
IUUC-Tgu-117340	Taeniopygia guttata	74.00	7.00e-178	616.00
IUUC-Tru-117577	Takifugu rubripes	73.51	5.00e-139	487.00
IUUC-Tsy-119404	Tarsius syrichta	84.04	0.00e+00	702.00
IUUC-Tni-120713	Tetraodon nigroviridis	70.68	5.00e-137	480.00
IUUC-Tbe-127788	Tupaia belangeri	72.31	1.00e-154	539.00
IUUC-Ttr-128608	Tursiops truncatus	87.53	0.00e+00	702.00
IUUC-Xtr-132720	Xenopus tropicalis	62.84	2.00e-160	558.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence