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Tag Content
iUUCD ID IUUC-Lch-050558
Ensembl Protein ID ENSLACP00000023492.1
UniProt Accession M3XL86; M3XL86_LATCH
Genbank Protein ID ENSLACP00000023492
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01005966
Gene Name POC1A
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000018788.2 ENSLACT00000026433.1 ENSLACP00000023492.1
ENSLACG00000018788.2 ENSLACT00000021525.1 ENSLACP00000021384.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.60e-55 180.8 144 182
UBD/Beta-Prp 2.00e-94 316.3 99 322
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
    H ++v+c +f +d +l+vs+sdD+tik+WD ++ +++s
   Q: 144 HINWVRCAKFsPDgRLIVSASDDKTIKIWDKTSRECIHS 182
    999********999*****************99999875 PP
   


   UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsgh 136
    ++ h+++v++v fs dg+ lvt+s+D+t+kvw + + +l++h + v++ +fsp+g +vs+s+d+ti++wd +++c++ + +
   Q: 99 FKAHTGTVRSVHFSTDGQSLVTASDDKTVKVWTVHRQRFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKIWDKTSRECIH-SFYEP 186
    589********************************************************************************.***** PP
   S: 137 dgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnv 225
    g+vn+v +hp+g +++++++D+tv++Wd++++kll++ + h + v+ lsf+++g++l+++s+d+t+k+ dl +g+ ++tl+gh+ +
   Q: 187 GGFVNYVDFHPSGTCIAAAGTDNTVKVWDIRMNKLLQHYQV-HCGGVNGLSFHPTGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPA 274
    ****************************************8.*********************************************** PP
   S: 226 ksvrfspnderlvsgssDgsiriW..dlrsgdllktlqlhn......s 265
    ++v+fs+ +++++sg+sD+++ +W + ++ d+ +l+ ++ s
   Q: 275 TCVAFSRAGDFFASGGSDEQVMVWktNFDTADYSEVLKSQQhatsvnS 322
    **************************9999999999988775554431 PP
   

Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MTSSLLEDPA LERHFKGHRD TITSVDFNPN MKQAATGSMD SCLMIWNMRP HMRAYRFIGH 60
KDAVMSVQFS PSGHLVASAS RDKTVRLWVP SVKGESTIFK AHTGTVRSVH FSTDGQSLVT 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Lch-050558|E3,WD_repeat;UBD,Beta-Prp|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CAGGACGCCG TTGCTTAGAG GCGGCAGCGG CGGCGGGGAA AGCGAAGCTG AGTTGTAACC 60
GACAAGTGAC GGTTAGAAGA AGAAAGCCGG TAAATCATCG CCGCCGCCGT CAGCAACTAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Lch-050558|E3,WD_repeat;UBD,Beta-Prp|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG lcm:102352352
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001513 Ailuropoda melanoleuca 68.14 2.00e-170 591.00
IUUC-Apl-003466 Anas platyrhynchos 75.82 0.00e+00 659.00
IUUC-Aca-004323 Anolis carolinensis 71.62 0.00e+00 650.00
IUUC-Bta-012484 Bos taurus 68.19 1.00e-178 619.00
IUUC-Cja-019067 Callithrix jacchus 67.44 8.00e-171 592.00
IUUC-Cfa-020439 Canis familiaris 68.12 1.00e-177 615.00
IUUC-Cpo-021403 Cavia porcellus 69.21 1.00e-177 615.00
IUUC-Cre-022724 Chlamydomonas reinhardtii 52.06 9.00e-122 429.00
IUUC-Csa-023479 Chlorocebus sabaeus 68.59 5.00e-157 546.00
IUUC-Cho-024354 Choloepus hoffmanni 70.91 6.00e-97 346.00
IUUC-Cin-025258 Ciona intestinalis 59.66 2.00e-169 588.00
IUUC-Csv-025955 Ciona savignyi 62.72 1.00e-151 529.00
IUUC-Dor-030399 Dipodomys ordii 67.67 1.00e-175 608.00
IUUC-Dme-032182 Drosophila melanogaster 47.87 1.00e-84 306.00
IUUC-Eca-034425 Equus caballus 68.60 2.00e-170 591.00
IUUC-Eeu-034607 Erinaceus europaeus 58.94 9.00e-144 503.00
IUUC-Fca-035627 Felis catus 67.73 6.00e-174 603.00
IUUC-Fal-037381 Ficedula albicollis 73.11 0.00e+00 643.00
IUUC-Gmo-038489 Gadus morhua 64.08 7.00e-159 553.00
IUUC-Gga-040559 Gallus gallus 71.40 0.00e+00 625.00
IUUC-Gac-041453 Gasterosteus aculeatus 67.82 4.00e-173 600.00
IUUC-Ggo-044773 Gorilla gorilla 68.35 6.00e-173 599.00
IUUC-Hsa-045823 Homo sapiens 68.35 2.00e-172 598.00
IUUC-Itr-048560 Ictidomys tridecemlineatus 69.07 4.00e-178 617.00
IUUC-Loc-052836 Lepisosteus oculatus 80.67 0.00e+00 738.00
IUUC-Laf-053974 Loxodonta africana 64.67 1.00e-156 546.00
IUUC-Mcc-055494 Macaca mulatta 67.65 2.00e-169 588.00
IUUC-Meu-056646 Macropus eugenii 71.09 8.00e-128 449.00
IUUC-Mga-059295 Meleagris gallopavo 68.30 3.00e-178 617.00
IUUC-Mmr-061040 Microcebus murinus 69.11 3.00e-179 620.00
IUUC-Mdo-062519 Monodelphis domestica 69.85 6.00e-170 589.00
IUUC-Mmu-063759 Mus musculus 79.86 6.00e-146 510.00
IUUC-Mpu-066442 Mustela putorius furo 67.20 4.00e-172 597.00
IUUC-Mlu-068163 Myotis lucifugus 69.53 2.00e-179 621.00
IUUC-Nle-070160 Nomascus leucogenys 67.66 1.00e-171 595.00
IUUC-Opr-070192 Ochotona princeps 67.08 1.00e-157 549.00
IUUC-Ont-072539 Oreochromis niloticus 79.17 1.00e-156 545.00
IUUC-Ocu-074624 Oryctolagus cuniculus 68.67 5.00e-163 566.00
IUUC-Ola-087268 Oryzias latipes 63.95 1.00e-165 575.00
IUUC-Oga-088964 Otolemur garnettii 65.57 3.00e-162 564.00
IUUC-Oar-090202 Ovis aries 68.98 1.00e-173 602.00
IUUC-Ptr-091164 Pan troglodytes 68.82 2.00e-172 597.00
IUUC-Pan-092805 Papio anubis 68.34 1.00e-156 545.00
IUUC-Psi-093359 Pelodiscus sinensis 85.31 1.00e-169 588.00
IUUC-Pma-094425 Petromyzon marinus 68.34 0.00e+00 630.00
IUUC-Ppa-095677 Physcomitrella patens 48.36 5.00e-88 317.00
IUUC-Pfo-096741 Poecilia formosa 60.55 3.00e-166 578.00
IUUC-Pab-098376 Pongo abelii 68.12 4.00e-177 613.00
IUUC-Pca-101122 Procavia capensis 68.14 5.00e-176 610.00
IUUC-Rno-105282 Rattus norvegicus 65.41 4.00e-150 523.00
IUUC-Sha-106840 Sarcophilus harrisii 78.42 3.00e-117 414.00
IUUC-Smo-108731 Selaginella moellendorffii 47.23 8.00e-85 306.00
IUUC-Ssc-115392 Sus scrofa 77.04 2.00e-156 544.00
IUUC-Tgu-117340 Taeniopygia guttata 70.05 1.00e-176 612.00
IUUC-Tru-117577 Takifugu rubripes 75.33 1.00e-141 496.00
IUUC-Tsy-119404 Tarsius syrichta 62.79 8.00e-160 556.00
IUUC-Tni-120713 Tetraodon nigroviridis 74.12 6.00e-145 507.00
IUUC-Tbe-127788 Tupaia belangeri 55.11 3.00e-119 421.00
IUUC-Ttr-128608 Tursiops truncatus 65.37 2.00e-167 581.00
IUUC-Xtr-132720 Xenopus tropicalis 68.76 5.00e-176 610.00
Created Date 25-Jun-2017

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