iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091164

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03025713

Gene Name

POC1A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000014989.4	ENSPTRT00000028052.4	ENSPTRP00000025877.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-58	192.0	143	181
UBD/Beta-Prp	1.30e-81	274.0	15	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H ++v+c +f +d +l+vs+sdD+t+k+WD ++  +++s
   Q: 143  HINWVRCAKFsPDgRLIVSASDDKTVKLWDKSSRECVHS 181
           999********999****************999888875 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
           kg h + +tcv+fs ++++la+gs+d+++ vw +++++   ++ gh+++vt+v+fsp+g +l++gs+D+t+++w ++      ++++h+
   Q: 15   KG-HRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT 102
           44.5557777***999999*******************************************************7765555567899** PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
           ++v+s++f+ +g+++v++s+d+t++vw ++ ++ l   ls+h  +v+c++++pdg+l+vs+s+D+tv+lWd ++ ++++   + h + v
   Q: 103  ATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLF-SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE-HGGFV 189
           ***************************999999998.9*******************************************98.***** PP
   S: 184  yslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
           + ++f+++g++++++++d+tvk+wd++t + ++ +
   Q: 190  TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHY 224
           ***************************99988776 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MVALREDPSL ERHFKGHRDA VTCVDFSINT KQLASGSMDS CLMVWHMKPQ SRAYRFTGHK 60
DAVTCVNFSP SGHLLASGSR DKTVRIWVPN VKGESTVFRA HTATVRSVHF CSDGQSFVTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGGCGC TGCGCGTAGC CCAGCCGAGA GCAACTCCCC AGCCTCAGTC TCCCCGCTGG 60
ACACTGGCGC TAGTGGCCAG AGCGATGGCT GCGAGGGCGG GCGGGGCGCC AGGTTCCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0003431--P:growth plate cartilage chondrocyte development
GO:0007052--P:mitotic spindle organization
GO:1905515--P:non-motile cilium assembly
GO:0010825--P:positive regulation of centrosome duplication
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001513	Ailuropoda melanoleuca	94.53	0.00e+00	762.00
IUUC-Apl-003466	Anas platyrhynchos	77.75	0.00e+00	646.00
IUUC-Aca-004323	Anolis carolinensis	70.98	2.00e-180	625.00
IUUC-Bta-012484	Bos taurus	94.26	0.00e+00	788.00
IUUC-Cja-019067	Callithrix jacchus	95.06	0.00e+00	798.00
IUUC-Cfa-020439	Canis familiaris	93.52	0.00e+00	783.00
IUUC-Cpo-021403	Cavia porcellus	90.39	0.00e+00	784.00
IUUC-Cre-022724	Chlamydomonas reinhardtii	50.89	1.00e-112	399.00
IUUC-Csa-023479	Chlorocebus sabaeus	98.10	0.00e+00	718.00
IUUC-Cho-024354	Choloepus hoffmanni	88.18	2.00e-115	407.00
IUUC-Cin-025258	Ciona intestinalis	72.08	7.00e-142	496.00
IUUC-Csv-025955	Ciona savignyi	64.38	8.00e-147	513.00
IUUC-Dno-029467	Dasypus novemcinctus	78.65	5.00e-126	443.00
IUUC-Dor-030399	Dipodomys ordii	90.05	0.00e+00	762.00
IUUC-Dme-032182	Drosophila melanogaster	46.23	7.00e-81	294.00
IUUC-Eca-034425	Equus caballus	93.53	0.00e+00	756.00
IUUC-Eeu-034607	Erinaceus europaeus	81.55	0.00e+00	636.00
IUUC-Fca-035627	Felis catus	95.26	0.00e+00	775.00
IUUC-Fal-037381	Ficedula albicollis	74.45	0.00e+00	630.00
IUUC-Gmo-038489	Gadus morhua	68.01	7.00e-161	559.00
IUUC-Gga-040559	Gallus gallus	75.13	4.00e-179	620.00
IUUC-Gac-041453	Gasterosteus aculeatus	70.18	2.00e-170	591.00
IUUC-Ggo-044773	Gorilla gorilla	99.25	0.00e+00	788.00
IUUC-Hsa-045823	Homo sapiens	100.00	0.00e+00	796.00
IUUC-Itr-048560	Ictidomys tridecemlineatus	93.03	0.00e+00	796.00
IUUC-Lch-050558	Latimeria chalumnae	69.05	2.00e-177	615.00
IUUC-Loc-052836	Lepisosteus oculatus	68.64	8.00e-177	612.00
IUUC-Laf-053974	Loxodonta africana	84.41	0.00e+00	681.00
IUUC-Mcc-055494	Macaca mulatta	95.13	0.00e+00	771.00
IUUC-Meu-056646	Macropus eugenii	75.35	8.00e-128	449.00
IUUC-Mga-059295	Meleagris gallopavo	67.71	2.00e-173	601.00
IUUC-Mmr-061040	Microcebus murinus	94.51	0.00e+00	793.00
IUUC-Mdo-062519	Monodelphis domestica	77.84	2.00e-176	611.00
IUUC-Mmu-063759	Mus musculus	94.00	3.00e-172	597.00
IUUC-Mpu-066442	Mustela putorius furo	93.52	0.00e+00	760.00
IUUC-Mlu-068163	Myotis lucifugus	92.77	0.00e+00	771.00
IUUC-Nle-070160	Nomascus leucogenys	98.75	0.00e+00	789.00
IUUC-Opr-070192	Ochotona princeps	90.32	0.00e+00	672.00
IUUC-Ont-072539	Oreochromis niloticus	76.72	6.00e-149	520.00
IUUC-Oan-072834	Ornithorhynchus anatinus	61.59	6.00e-113	400.00
IUUC-Ocu-074624	Oryctolagus cuniculus	92.68	0.00e+00	719.00
IUUC-Ola-087268	Oryzias latipes	62.88	9.00e-160	556.00
IUUC-Oga-088964	Otolemur garnettii	86.80	0.00e+00	741.00
IUUC-Oar-090202	Ovis aries	93.53	0.00e+00	751.00
IUUC-Pan-092805	Papio anubis	97.29	0.00e+00	712.00
IUUC-Psi-093359	Pelodiscus sinensis	81.79	4.00e-164	570.00
IUUC-Pma-094425	Petromyzon marinus	63.30	2.00e-164	572.00
IUUC-Ppa-095677	Physcomitrella patens	46.38	3.00e-81	294.00
IUUC-Pfo-096741	Poecilia formosa	58.66	4.00e-156	544.00
IUUC-Pab-098376	Pongo abelii	99.00	0.00e+00	831.00
IUUC-Pca-101122	Procavia capensis	89.78	0.00e+00	750.00
IUUC-Pva-103104	Pteropus vampyrus	72.82	3.00e-165	574.00
IUUC-Rno-105282	Rattus norvegicus	87.03	0.00e+00	664.00
IUUC-Sha-106840	Sarcophilus harrisii	80.17	4.00e-118	417.00
IUUC-Smo-109423	Selaginella moellendorffii	44.63	9.00e-78	283.00
IUUC-Sar-113262	Sorex araneus	64.59	7.00e-143	499.00
IUUC-Ssc-115392	Sus scrofa	92.54	0.00e+00	656.00
IUUC-Tgu-117340	Taeniopygia guttata	73.75	2.00e-177	614.00
IUUC-Tsy-119404	Tarsius syrichta	86.53	0.00e+00	724.00
IUUC-Tni-120713	Tetraodon nigroviridis	69.91	3.00e-136	478.00
IUUC-Tbe-127788	Tupaia belangeri	73.39	1.00e-157	548.00
IUUC-Ttr-128608	Tursiops truncatus	89.78	0.00e+00	710.00
IUUC-Xtr-132720	Xenopus tropicalis	62.75	5.00e-159	553.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence