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Tag Content
UUCD2 ID IUUC-Pop-100037
UUCD1 version UUC-PoT-00741
Ensembl Protein ID POPTR_0005s06230.1
UniProt Accession B9H467; B9H467_POPTR
Genbank Protein ID EEE93235.2
Protein Name Transducin family protein
Genbank Nucleotide ID CM000341
Gene Name POPTRDRAFT_558393; POPTR_0005s06230g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0005s06230 POPTR_0005s06230.2 POPTR_0005s06230.2
POPTR_0005s06230 POPTR_0005s06230.1 POPTR_0005s06230.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.10e-29 99.9 262 293
UBD/Beta-Prp 4.70e-43 148.6 153 379
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
    gH+++v+cl f s l sGs+D +ik+W++
   Q: 262 GHKGPVSCLTFrkgS-SELFSGSYDRSIKIWNV 293
    8**********9643.789*************8 PP
   


   UBD/Beta-Prp

   S: 86   cvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..................tlsghdgvvncvvvhpdgnllvsGslD 158
    + +l +h +sv+++ +s +++k s+s+d ti wd+++g+ + ++h++ v ++v+ dg++l+sG+lD
   Q: 153 GFEVLVKHRQSVTAVCLSDDDSKGFSASKDGTILHWDVDSGKAEKYqwpndeilrshgaknpegRATKHSRNVLALAVSTDGRYLASGGLD 243
    5566778***********************************99889*****************9999*********************** PP
   S: 159 rtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
    r v lWd +t + ++ + g h+++v +l+f++ + el sgs+d+++k+w+++ ++tl gh++ v+ ++ + +er++ ++ D+s +++
   Q: 244 RHVHLWDTRTREHIQAFPG-HKGPVSCLTFRKGSSELFSGSYDRSIKIWNVEDRAYMNTLFGHQSEVLTIDCL-WQERVLAVGRDRSMQLF 332
    ******************9.***************************************************99.7889999999******* PP
   S: 250 dlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkknep 299
    + +++ + + ss+ ++++ ++++++v+gs+d+++++w+++k++p
   Q: 333 -KVHDESRLIFRSSTSSLECCCF--IDNSEFVSGSDDGNIELWSVQKKKP 379
    .89************99999999..********************99876 PP
   

Organism Populus trichocarpa
Protein Sequence
(Fasta)
MNKNPRKRGG PPGRNKRGGS KFSMNRDPFF SNNKRRKKGE DEDIESEEEE ELDGGMLNGG 60
GESGEDEEDE ELIPEETAEE KRQRIAKAVV ENLRAREKEL EGEEDEEGDR EFEKEGERDS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Pop-100037|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCTCACCAAA AACCCCTAAC GTTAAACCCT ACTCGCAGAG CTCCTTTCCC TTTCAAAGCT 60
CTCTCCACCC AGCCCCCTTT ATTTCCCTCT TTCTCTGCTA AAAAGCAAAA AATCTTTTCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Pop-100037|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0006364--P:rRNA processing

KEGG pop:POPTR_0005s06230g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000586 Aegilops tauschii 57.36 9.00e-124 436.00
IUUC-Atr-002824 Amborella trichopoda 65.99 9.00e-152 529.00
IUUC-Aly-005535 Arabidopsis lyrata 64.94 3.00e-140 491.00
IUUC-Ath-007119 Arabidopsis thaliana 64.66 6.00e-147 513.00
IUUC-Ago-007710 Ashbya gossypii 25.45 3.00e-38 152.00
IUUC-Acl-008345 Aspergillus clavatus 27.78 2.00e-39 156.00
IUUC-Afl-008718 Aspergillus flavus 35.69 1.00e-40 160.00
IUUC-Afu-008966 Aspergillus fumigatus 30.03 4.00e-41 162.00
IUUC-Ani-009214 Aspergillus nidulans 29.43 4.00e-43 168.00
IUUC-Ang-009774 Aspergillus niger 29.51 6.00e-43 168.00
IUUC-Aor-009956 Aspergillus oryzae 35.69 1.00e-40 160.00
IUUC-Ate-010449 Aspergillus terreus 29.75 1.00e-42 167.00
IUUC-Ame-011860 Astyanax mexicanus 38.82 5.00e-82 297.00
IUUC-Bgr-012213 Blumeria graminis 25.80 3.00e-45 176.00
IUUC-Bci-013973 Botrytis cinerea 29.97 5.00e-47 181.00
IUUC-Bdi-014790 Brachypodium distachyon 60.47 3.00e-132 464.00
IUUC-Cel-018616 Caenorhabditis elegans 34.78 8.00e-55 207.00
IUUC-Cin-025670 Ciona intestinalis 34.98 1.00e-71 263.00
IUUC-Csv-026172 Ciona savignyi 35.45 5.00e-71 260.00
IUUC-Cme-027125 Cyanidioschyzon merolae 25.91 1.00e-34 140.00
IUUC-Dre-027919 Danio rerio 40.53 2.00e-82 299.00
IUUC-Dse-031503 Dothistroma septosporum 27.20 2.00e-37 149.00
IUUC-Dme-031979 Drosophila melanogaster 33.10 2.00e-62 232.00
IUUC-Fal-037058 Ficedula albicollis 39.74 7.00e-77 280.00
IUUC-Fso-038298 Fusarium solani 28.67 5.00e-49 188.00
IUUC-Ggr-040074 Gaeumannomyces graminis 35.92 7.00e-43 168.00
IUUC-Gac-042583 Gasterosteus aculeatus 36.09 4.00e-77 281.00
IUUC-Gma-042659 Glycine max 64.29 1.00e-162 565.00
IUUC-Hvu-047173 Hordeum vulgare 60.47 2.00e-137 481.00
IUUC-Itr-048062 Ictidomys tridecemlineatus 39.21 2.00e-77 282.00
IUUC-Lch-050566 Latimeria chalumnae 41.78 2.00e-76 279.00
IUUC-Lpe-051651 Leersia perrieri 62.37 2.00e-137 481.00
IUUC-Loc-051997 Lepisosteus oculatus 40.79 1.00e-81 296.00
IUUC-Lma-053182 Leptosphaeria maculans 25.93 6.00e-34 138.00
IUUC-Meu-055943 Macropus eugenii 38.64 1.00e-72 266.00
IUUC-Mor-057069 Magnaporthe oryzae 27.61 2.00e-46 179.00
IUUC-Mpo-057358 Magnaporthe poae 35.02 7.00e-42 164.00
IUUC-Mmr-061403 Microcebus murinus 37.41 5.00e-76 277.00
IUUC-Mac-065149 Musa acuminata 66.24 3.00e-157 547.00
IUUC-Nfi-068288 Neosartorya fischeri 29.22 2.00e-40 159.00
IUUC-Ncr-068679 Neurospora crassa 26.79 2.00e-37 149.00
IUUC-Ont-071661 Oreochromis niloticus 40.53 1.00e-81 296.00
IUUC-Oba-075607 Oryza barthii 61.31 9.00e-125 439.00
IUUC-Obr-076581 Oryza brachyantha 61.27 2.00e-47 181.00
IUUC-Ogl-077387 Oryza glaberrima 60.78 3.00e-133 468.00
IUUC-Ogu-078323 Oryza glumaepatula 60.73 3.00e-131 461.00
IUUC-Oin-079977 Oryza indica 55.46 3.00e-104 371.00
IUUC-Olo-080857 Oryza longistaminata 60.88 4.00e-132 463.00
IUUC-Ome-081568 Oryza meridionalis 60.62 1.00e-131 462.00
IUUC-Oni-082685 Oryza nivara 60.73 2.00e-136 478.00
IUUC-Opu-084049 Oryza punctata 61.52 9.00e-133 466.00
IUUC-Oru-084348 Oryza rufipogon 60.73 2.00e-136 478.00
IUUC-Osa-086076 Oryza sativa 60.73 2.00e-136 478.00
IUUC-Ola-086991 Oryzias latipes 41.05 6.00e-82 297.00
IUUC-Olu-087891 Ostreococcus lucimarinus 38.21 1.00e-77 283.00
IUUC-Pma-094447 Petromyzon marinus 32.98 3.00e-57 215.00
IUUC-Pno-095008 Phaeosphaeria nodorum 26.71 1.00e-34 140.00
IUUC-Ppa-095680 Physcomitrella patens 52.75 1.00e-124 439.00
IUUC-Pfo-096430 Poecilia formosa 40.16 2.00e-81 296.00
IUUC-Pca-100317 Procavia capensis 41.72 3.00e-32 132.00
IUUC-Ppe-101999 Prunus persica 70.80 9.00e-175 605.00
IUUC-Ptt-103812 Puccinia triticina 27.66 7.00e-28 118.00
IUUC-Sce-106329 Saccharomyces cerevisiae 28.96 4.00e-35 142.00
IUUC-Sja-107821 Schizosaccharomyces japonicus 29.95 5.00e-50 191.00
IUUC-Spo-108329 Schizosaccharomyces pombe 30.56 3.00e-51 195.00
IUUC-Ssl-108552 Sclerotinia sclerotiorum 31.19 1.00e-48 187.00
IUUC-Sit-109694 Setaria italica 63.02 6.00e-142 496.00
IUUC-Sly-111294 Solanum lycopersicum 69.44 2.00e-162 564.00
IUUC-Stu-112747 Solanum tuberosum 69.44 6.00e-163 566.00
IUUC-Sbi-114694 Sorghum bicolor 62.05 2.00e-141 495.00
IUUC-Tru-118285 Takifugu rubripes 41.58 1.00e-86 313.00
IUUC-Tni-120368 Tetraodon nigroviridis 42.11 7.00e-87 313.00
IUUC-Tca-121724 Theobroma cacao 60.19 3.00e-167 581.00
IUUC-Tre-122106 Trichoderma reesei 27.27 3.00e-46 179.00
IUUC-Tvi-122526 Trichoderma virens 28.78 3.00e-45 176.00
IUUC-Tae-125579 Triticum aestivum 61.24 1.00e-139 489.00
IUUC-Tur-126548 Triticum urartu 60.72 3.00e-138 484.00
IUUC-Tme-126985 Tuber melanosporum 28.87 3.00e-48 186.00
IUUC-Uma-129472 Ustilago maydis 31.49 1.00e-46 180.00
IUUC-Vda-129910 Verticillium dahliae 27.85 2.00e-46 179.00
IUUC-Xtr-132118 Xenopus tropicalis 39.53 2.00e-77 282.00
IUUC-Xma-133804 Xiphophorus maculatus 40.16 6.00e-82 297.00
IUUC-Yli-134639 Yarrowia lipolytica 27.29 5.00e-40 158.00
IUUC-Zma-135779 Zea mays 62.31 1.00e-135 476.00
Created Date 25-Jun-2017

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