iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026418

Ensembl Protein ID

ELA37079

UniProt Accession

L2GEJ6; L2GEJ6_COLGN

Genbank Protein ID

ELA37079.1

Protein Name

WD-repeat protein pop3

Genbank Nucleotide ID

KB020494

Gene Name

CGGC5_3488

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_3488	ELA37079	ELA37079

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-33	111.6	73	109
UBD/Beta-Prp	8.80e-53	179.0	4	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt+ +t++af  + + +v++s Dgt+k+W++r+g +
   Q: 73   GHTGNITGVAFhCEgKWMVTSSEDGTVKIWETRSGQV 109
           8**********9667999**************99975 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls..tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwd 122
           +l t+++d+ti+ w++ +g + r+++  +++v+ +++spd+  ++ ++  +t+k++d++  ++ ++ t++gh+ +++ ++f+ +g+++v+ s+d t+++w+
   Q: 4    ILCTAGYDHTIRFWEALSGICSRTIQHPDSQVNRLCISPDK-RFLAAAGHHTVKLYDIKstNPNPLLTFEGHTGNITGVAFHCEGKWMVTSSEDGTVKIWE 103
           578999**********************************8.677777789*****9998899************************************** PP
   S: 123  letgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq......tgec..v 215
           +++gq+ +    +h    n vv+hp++  ++s+   + vr+Wdl+ +++ ++l  + + sv s+++ s+g  l ++ + g v +w+l       +     v
   Q: 104  TRSGQVQR--SYNHGCPANDVVIHPNQGEIISCDRMGSVRVWDLAENNCSHQLIPEEDVSVSSVTVASDGSLLCAANNGGNVFVWQLLqtydrtQ--LlpV 200
           *******9..7888888************************************8779*****************************987776533..145* PP
   S: 216  rtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
             +n+h++ ++++ +sp+ + l+++s+D + riW ++  ++ 
   Q: 201  THFNAHKEYITRILLSPDVKKLATCSADHTARIWEVKDLEPA 242
           **********************************87766655 PP

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MSVILCTAGY DHTIRFWEAL SGICSRTIQH PDSQVNRLCI SPDKRFLAAA GHHTVKLYDI 60
KSTNPNPLLT FEGHTGNITG VAFHCEGKWM VTSSEDGTVK IWETRSGQVQ RSYNHGCPAN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGTGA TTCTCTGCAC AGGTAAGCCC CCGAGTCTTG GGTCCCTTTC GCATCCCCAA 60
AGCACCTTCC AGCCCTGTCG ATGCTCAAAG GCCGGTGAAA CAGATCGCTA ATAATTGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0010008--C:endosome membrane
GO:0031234--C:extrinsic component of cytoplasmic side of plasma membrane
GO:0000139--C:Golgi membrane
GO:0034399--C:nuclear periphery
GO:0031931--C:TORC1 complex
GO:0031932--C:TORC2 complex
GO:0030295--F:protein kinase activator activity
GO:0030950--P:establishment or maintenance of actin cytoskeleton polarity
GO:0031505--P:fungal-type cell wall organization
GO:0031930--P:mitochondria-nucleus signaling pathway
GO:0001558--P:regulation of cell growth
GO:0031929--P:TOR signaling

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000595	Aegilops tauschii	53.58	1.00e-96	344.00
IUUC-Aml-001813	Ailuropoda melanoleuca	45.71	2.00e-76	277.00
IUUC-Atr-002512	Amborella trichopoda	51.40	3.00e-92	329.00
IUUC-Apl-003495	Anas platyrhynchos	41.90	8.00e-58	215.00
IUUC-Aca-004613	Anolis carolinensis	47.13	5.00e-78	283.00
IUUC-Aly-006340	Arabidopsis lyrata	51.28	2.00e-89	320.00
IUUC-Ath-007273	Arabidopsis thaliana	50.64	4.00e-88	316.00
IUUC-Ago-007737	Ashbya gossypii	63.78	5.00e-122	428.00
IUUC-Acl-008090	Aspergillus clavatus	76.27	1.00e-104	371.00
IUUC-Afl-008490	Aspergillus flavus	70.71	4.00e-77	279.00
IUUC-Afu-009060	Aspergillus fumigatus	70.54	7.00e-96	342.00
IUUC-Ani-009251	Aspergillus nidulans	75.21	2.00e-104	370.00
IUUC-Ang-009528	Aspergillus niger	74.68	1.00e-135	473.00
IUUC-Aor-010005	Aspergillus oryzae	72.56	2.00e-127	446.00
IUUC-Ate-010423	Aspergillus terreus	75.83	4.00e-104	369.00
IUUC-Ame-011752	Astyanax mexicanus	47.13	2.00e-78	284.00
IUUC-Bgr-012299	Blumeria graminis	78.78	2.00e-145	506.00
IUUC-Bta-013007	Bos taurus	45.37	1.00e-75	274.00
IUUC-Bci-013987	Botrytis cinerea	85.62	4.00e-154	535.00
IUUC-Bdi-014082	Brachypodium distachyon	53.89	2.00e-96	343.00
IUUC-Bol-015088	Brassica oleracea	51.45	1.00e-88	317.00
IUUC-Bra-016682	Brassica rapa	43.62	1.00e-74	271.00
IUUC-Cel-018473	Caenorhabditis elegans	24.63	7.00e-28	116.00
IUUC-Cja-019216	Callithrix jacchus	40.67	9.00e-55	204.00
IUUC-Cfa-021229	Canis familiaris	46.03	2.00e-77	280.00
IUUC-Cpo-022270	Cavia porcellus	46.03	2.00e-77	280.00
IUUC-Cre-022742	Chlamydomonas reinhardtii	50.63	2.00e-92	330.00
IUUC-Csa-023275	Chlorocebus sabaeus	46.03	1.00e-77	280.00
IUUC-Cin-025588	Ciona intestinalis	40.81	1.00e-71	261.00
IUUC-Csv-026252	Ciona savignyi	42.37	8.00e-73	265.00
IUUC-Cne-027013	Cryptococcus neoformans	61.59	4.00e-112	395.00
IUUC-Cme-027131	Cyanidioschyzon merolae	34.34	2.00e-56	211.00
IUUC-Dre-028424	Danio rerio	47.77	2.00e-79	287.00
IUUC-Dno-029327	Dasypus novemcinctus	46.03	2.00e-77	280.00
IUUC-Dor-030186	Dipodomys ordii	52.41	1.00e-43	167.00
IUUC-Dse-031475	Dothistroma septosporum	77.01	1.00e-146	510.00
IUUC-Dme-031826	Drosophila melanogaster	38.85	2.00e-56	210.00
IUUC-Ete-032252	Echinops telfairi	38.79	1.00e-46	178.00
IUUC-Eca-033889	Equus caballus	42.19	2.00e-45	173.00
IUUC-Fca-035989	Felis catus	45.71	4.00e-77	279.00
IUUC-Fal-036637	Ficedula albicollis	47.45	5.00e-79	285.00
IUUC-Fox-038066	Fusarium oxysporum	93.35	8.00e-176	607.00
IUUC-Fso-038288	Fusarium solani	90.19	1.00e-166	576.00
IUUC-Gmo-039477	Gadus morhua	47.45	4.00e-80	289.00
IUUC-Ggr-039990	Gaeumannomyces graminis	90.54	7.00e-168	580.00
IUUC-Gga-040890	Gallus gallus	47.13	2.00e-78	283.00
IUUC-Gac-041502	Gasterosteus aculeatus	47.77	1.00e-79	287.00
IUUC-Gma-043580	Glycine max	52.96	3.00e-94	336.00
IUUC-Ggo-045629	Gorilla gorilla	45.74	6.00e-76	275.00
IUUC-Hsa-045824	Homo sapiens	45.20	2.00e-65	240.00
IUUC-Hvu-047767	Hordeum vulgare	53.89	1.00e-96	344.00
IUUC-Itr-047932	Ictidomys tridecemlineatus	46.03	2.00e-77	280.00
IUUC-Kpa-049173	Komagataella pastoris	66.35	6.00e-125	438.00
IUUC-Lch-049703	Latimeria chalumnae	47.77	2.00e-79	287.00
IUUC-Lpe-050744	Leersia perrieri	47.19	9.00e-77	278.00
IUUC-Loc-052507	Lepisosteus oculatus	47.13	1.00e-78	284.00
IUUC-Lma-053084	Leptosphaeria maculans	78.64	8.00e-145	504.00
IUUC-Laf-053595	Loxodonta africana	46.03	4.00e-77	279.00
IUUC-Mcc-055634	Macaca mulatta	39.40	1.00e-67	248.00
IUUC-Meu-055925	Macropus eugenii	46.43	1.00e-66	244.00
IUUC-Mor-057131	Magnaporthe oryzae	82.65	1.00e-154	537.00
IUUC-Mpo-057524	Magnaporthe poae	90.22	6.00e-168	581.00
IUUC-Mtr-057980	Medicago truncatula	52.35	4.00e-93	332.00
IUUC-Mla-059082	Melampsora laricipopulina	52.06	2.00e-91	327.00
IUUC-Mga-059552	Meleagris gallopavo	42.76	6.00e-57	212.00
IUUC-Mvi-060504	Microbotryum violaceum	55.31	8.00e-98	349.00
IUUC-Mdo-062886	Monodelphis domestica	47.13	2.00e-78	283.00
IUUC-Mmu-063477	Mus musculus	46.03	2.00e-78	283.00
IUUC-Mac-065439	Musa acuminata	53.75	1.00e-95	341.00
IUUC-Mpu-066708	Mustela putorius furo	45.71	2.00e-76	277.00
IUUC-Mlu-067311	Myotis lucifugus	43.87	4.00e-74	269.00
IUUC-Nfi-068294	Neosartorya fischeri	66.79	4.00e-98	349.00
IUUC-Ncr-068811	Neurospora crassa	85.80	3.00e-163	565.00
IUUC-Nle-069632	Nomascus leucogenys	46.03	2.00e-77	280.00
IUUC-Opr-071128	Ochotona princeps	48.04	9.00e-46	174.00
IUUC-Ont-071494	Oreochromis niloticus	47.13	7.00e-79	285.00
IUUC-Oan-073298	Ornithorhynchus anatinus	40.74	4.00e-34	135.00
IUUC-Ocu-073983	Oryctolagus cuniculus	45.71	3.00e-76	276.00
IUUC-Oba-076001	Oryza barthii	46.73	3.00e-76	276.00
IUUC-Obr-076833	Oryza brachyantha	51.71	3.00e-91	326.00
IUUC-Ogl-077680	Oryza glaberrima	51.71	3.00e-91	326.00
IUUC-Ogu-078086	Oryza glumaepatula	46.73	2.00e-76	277.00
IUUC-Oin-079336	Oryza indica	51.71	3.00e-91	326.00
IUUC-Olo-080368	Oryza longistaminata	44.44	1.00e-62	230.00
IUUC-Oni-083046	Oryza nivara	46.73	2.00e-76	276.00
IUUC-Opu-084173	Oryza punctata	46.73	3.00e-76	276.00
IUUC-Oru-084599	Oryza rufipogon	46.73	3.00e-76	276.00
IUUC-Osa-086193	Oryza sativa	51.71	3.00e-91	326.00
IUUC-Ola-087216	Oryzias latipes	47.45	5.00e-79	285.00
IUUC-Olu-087852	Ostreococcus lucimarinus	49.68	1.00e-88	317.00
IUUC-Oga-088840	Otolemur garnettii	45.43	1.00e-75	274.00
IUUC-Oar-089294	Ovis aries	45.04	2.00e-64	237.00
IUUC-Ptr-090565	Pan troglodytes	46.03	2.00e-77	280.00
IUUC-Pan-092175	Papio anubis	46.03	1.00e-77	280.00
IUUC-Psi-093180	Pelodiscus sinensis	43.17	1.00e-58	217.00
IUUC-Pma-094705	Petromyzon marinus	44.44	2.00e-76	277.00
IUUC-Pno-095001	Phaeosphaeria nodorum	74.38	5.00e-133	464.00
IUUC-Ppa-095628	Physcomitrella patens	52.85	2.00e-93	333.00
IUUC-Pfo-097128	Poecilia formosa	47.77	4.00e-79	286.00
IUUC-Pab-098386	Pongo abelii	46.03	2.00e-77	280.00
IUUC-Pop-099064	Populus trichocarpa	53.92	1.00e-94	337.00
IUUC-Pca-100971	Procavia capensis	45.55	2.00e-66	244.00
IUUC-Ppe-101871	Prunus persica	53.61	9.00e-95	338.00
IUUC-Pva-102230	Pteropus vampyrus	53.28	2.00e-35	141.00
IUUC-Pgr-103511	Puccinia graminis	52.17	1.00e-91	328.00
IUUC-Ptt-103882	Puccinia triticina	49.45	1.00e-89	321.00
IUUC-Pte-104402	Pyrenophora teres	78.02	4.00e-144	501.00
IUUC-Pyt-104448	Pyrenophora triticirepentis	77.71	9.00e-144	500.00
IUUC-Rno-104880	Rattus norvegicus	46.03	3.00e-78	283.00
IUUC-Sce-106266	Saccharomyces cerevisiae	65.38	2.00e-124	436.00
IUUC-Sha-106966	Sarcophilus harrisii	47.13	2.00e-78	283.00
IUUC-Sja-107797	Schizosaccharomyces japonicus	66.03	1.00e-119	421.00
IUUC-Spo-108366	Schizosaccharomyces pombe	66.03	4.00e-122	429.00
IUUC-Smo-108749	Selaginella moellendorffii	52.05	5.00e-88	315.00
IUUC-Sit-110807	Setaria italica	54.21	1.00e-96	343.00
IUUC-Sly-111879	Solanum lycopersicum	48.55	2.00e-59	219.00
IUUC-Sbi-114551	Sorghum bicolor	54.21	2.00e-96	343.00
IUUC-Sre-114962	Sporisorium reilianum	54.95	5.00e-109	385.00
IUUC-Ssc-115363	Sus scrofa	46.06	3.00e-76	276.00
IUUC-Tgu-116695	Taeniopygia guttata	39.81	1.00e-51	194.00
IUUC-Tru-117999	Takifugu rubripes	45.57	3.00e-77	280.00
IUUC-Tni-119973	Tetraodon nigroviridis	46.18	8.00e-78	281.00
IUUC-Tca-121688	Theobroma cacao	52.81	8.00e-93	331.00
IUUC-Tre-122158	Trichoderma reesei	86.12	6.00e-160	554.00
IUUC-Tvi-122511	Trichoderma virens	90.28	5.00e-170	588.00
IUUC-Tae-124175	Triticum aestivum	53.58	1.00e-96	344.00
IUUC-Tur-126228	Triticum urartu	48.60	9.00e-82	294.00
IUUC-Tme-127100	Tuber melanosporum	78.41	3.00e-146	508.00
IUUC-Uma-129358	Ustilago maydis	55.87	1.00e-109	388.00
IUUC-Vda-129756	Verticillium dahliae	94.32	2.00e-175	605.00
IUUC-Vvi-131581	Vitis vinifera	53.29	2.00e-92	330.00
IUUC-Xtr-132363	Xenopus tropicalis	47.45	1.00e-79	288.00
IUUC-Xma-133857	Xiphophorus maculatus	47.77	4.00e-79	286.00
IUUC-Yli-134368	Yarrowia lipolytica	70.51	1.00e-131	460.00
IUUC-Zma-135854	Zea mays	53.89	1.00e-95	340.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence