iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043509

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000846

Gene Name

LOC100790793; GLYMA_13G107300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G16700	GLYMA13G16700.1	GLYMA13G16700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-36	124.3	241	272
UBD/Beta-Prp	9.90e-55	187.4	10	320

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+++v c++  +d   +++Gs D ++++WDl
   Q: 241  GHASWVLCVDVsPDgAAIATGSSDRSVRLWDL 272
           8***********99888**************8 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkf....spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghed 95
           +++h++ + +v++    ++  +ll+tgs d+t+++w+ ++  l  +  gh  +v++v  +p g++ +++s D +++v+d++++ ++ tl++  +
   Q: 10   ENAHDDSVWAVTWvpatANRPPLLLTGSLDETVRLWRSDDLVLELTNTGHCLGVASVAAHPLGSVVASSSLDSFVRVFDVDSNATIATLEAPPS 103
           5556666666777677788899******************9999999*********************************************** PP
   S: 96   svlslsfspsg.dklvsGshdrtirvwdletgqclee............tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtlt 176
           +v+ ++f+p+g    v+G+    +++wd+++ + + +             +sg +++v +++++pdg+ l+ Gs D+t+ ++d++++k l++l+
   Q: 104  EVWQMRFDPKGaILAVAGGGSASVKLWDTSSWELVATlsiprpegqkptDKSGSKKFVLSIAWSPDGKRLACGSMDGTISVFDVPRAKFLHHLE 197
           *********9956668999**********99999999***********8899****************************************** PP
   S: 177  gghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvis 269
           g h  +v+sl +++   + l ++s+dg v ++d + +  + t+ gh ++v++v++sp++  +++gssD+s+r+Wdl  +  ++t+++h ++v+ 
   Q: 198  G-HFMPVRSLVYSPYDpRLLFTASDDGNVHMYDAEGKALIGTMSGHASWVLCVDVSPDGAAIATGSSDRSVRLWDLNMRASVQTMSNHSDQVWG 290
           9.*********8886647889************************************************************************* PP
   S: 270  vav.....lsfgdnvlvlgsedskvniwkl 294
           va+      ++ +  l+++s+d+++ ++++
   Q: 291  VAFrspggSDVRGVRLASVSDDKSISLYDY 320
           ***4444444446666************98 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MKLSGLKSVE NAHDDSVWAV TWVPATANRP PLLLTGSLDE TVRLWRSDDL VLELTNTGHC 60
LGVASVAAHP LGSVVASSSL DSFVRVFDVD SNATIATLEA PPSEVWQMRF DPKGAILAVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAACAA AAAAGGAAAT ATTCAACTTA TAAAAGGTGA TGTGAATGGG CCCAGCAGCT 60
ACTAGAGTAA GGCCCATCAG AGTCAACCAA ATTTGAAGGC ACGAAAGTGA AGTGAGGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

gmx:100790793

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003179	Anas platyrhynchos	41.53	2.00e-61	229.00
IUUC-Ame-011511	Astyanax mexicanus	41.30	4.00e-60	224.00
IUUC-Bta-012936	Bos taurus	40.94	2.00e-57	216.00
IUUC-Cre-022602	Chlamydomonas reinhardtii	43.45	3.00e-55	208.00
IUUC-Cho-024421	Choloepus hoffmanni	35.68	3.00e-22	97.80
IUUC-Cin-025261	Ciona intestinalis	39.38	1.00e-59	223.00
IUUC-Dno-029084	Dasypus novemcinctus	40.99	6.00e-56	211.00
IUUC-Dme-031836	Drosophila melanogaster	38.89	2.00e-58	219.00
IUUC-Fca-036569	Felis catus	40.62	6.00e-57	214.00
IUUC-Gmo-039579	Gadus morhua	42.19	4.00e-62	231.00
IUUC-Gac-042100	Gasterosteus aculeatus	41.88	1.00e-61	229.00
IUUC-Itr-048741	Ictidomys tridecemlineatus	40.94	2.00e-57	215.00
IUUC-Lch-049549	Latimeria chalumnae	37.81	1.00e-55	209.00
IUUC-Loc-052540	Lepisosteus oculatus	40.31	5.00e-56	211.00
IUUC-Laf-053907	Loxodonta africana	40.94	2.00e-57	215.00
IUUC-Meu-056075	Macropus eugenii	40.88	2.00e-51	195.00
IUUC-Mdo-062758	Monodelphis domestica	40.50	3.00e-61	228.00
IUUC-Mmu-063580	Mus musculus	40.62	5.00e-57	214.00
IUUC-Mpu-066577	Mustela putorius furo	40.94	1.00e-56	213.00
IUUC-Opr-070216	Ochotona princeps	41.35	3.00e-57	215.00
IUUC-Ont-071981	Oreochromis niloticus	41.56	4.00e-61	228.00
IUUC-Oan-073223	Ornithorhynchus anatinus	42.11	6.00e-41	160.00
IUUC-Ola-086696	Oryzias latipes	41.67	1.00e-57	216.00
IUUC-Oga-088272	Otolemur garnettii	41.25	1.00e-57	216.00
IUUC-Oar-089416	Ovis aries	40.94	2.00e-57	216.00
IUUC-Pma-094608	Petromyzon marinus	40.38	9.00e-54	203.00
IUUC-Pfo-096479	Poecilia formosa	41.25	6.00e-58	217.00
IUUC-Pca-100664	Procavia capensis	34.30	4.00e-25	108.00
IUUC-Pva-102859	Pteropus vampyrus	40.62	4.00e-56	211.00
IUUC-Rno-105826	Rattus norvegicus	40.62	1.00e-56	213.00
IUUC-Sha-106660	Sarcophilus harrisii	40.19	7.00e-58	217.00
IUUC-Spo-108244	Schizosaccharomyces pombe	25.60	2.00e-23	102.00
IUUC-Sar-113743	Sorex araneus	40.00	2.00e-39	155.00
IUUC-Ssc-115560	Sus scrofa	39.06	3.00e-52	198.00
IUUC-Tru-117933	Takifugu rubripes	41.56	2.00e-61	229.00
IUUC-Tsy-119574	Tarsius syrichta	34.38	4.00e-39	155.00
IUUC-Tni-120191	Tetraodon nigroviridis	41.13	5.00e-44	170.00
IUUC-Tbe-127802	Tupaia belangeri	40.62	6.00e-57	214.00
IUUC-Vpa-130618	Vicugna pacos	41.80	5.00e-48	184.00
IUUC-Xtr-132460	Xenopus tropicalis	41.25	3.00e-59	221.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence