iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d033615	Zm00001d033615_T002	Zm00001d033615_T002
Zm00001d033615	Zm00001d033615_T003	Zm00001d033615_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-34	118.1	195	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           gHt+sv +l+   s+  l+vsGs+Dg+  +WDlr+++
   Q: 195  GHTGSVKSLSChsSNpELIVSGSRDGSFALWDLRCDP 231
           8********9999778*****************9986 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MHARYFLPLS PSASLRLCPS FLSPTLMATR RRLSPTFFGG LRAREHGGAS GSSRATAGLP 60
YLADLSSNPG GRGGGVIAVE HSGDPVIPFA ISFGKTAQTC NLLAVADEDG YVGLYDTRRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCCAATGCA TGCCCGCTAT TTCCTTCCCC TCTCTCCGTC CGCGTCTCTG CGCCTATGCC 60
CATCTTTTTT GTCTCCGACT CTCATGGCGA CGCGGCGGCG CCTCTCTCCG ACTTTCTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR023302--Pept_S9A_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004088	Anas platyrhynchos	30.88	1.00e-57	217.00
IUUC-Ate-010454	Aspergillus terreus	24.84	1.00e-14	73.60
IUUC-Cel-018498	Caenorhabditis elegans	29.15	1.00e-34	140.00
IUUC-Cho-024445	Choloepus hoffmanni	28.19	1.00e-31	130.00
IUUC-Dme-031691	Drosophila melanogaster	29.72	2.00e-45	176.00
IUUC-Lch-050616	Latimeria chalumnae	33.51	2.00e-56	213.00
IUUC-Loc-052564	Lepisosteus oculatus	33.08	1.00e-54	207.00
IUUC-Mdo-063020	Monodelphis domestica	34.02	1.00e-58	221.00
IUUC-Pma-094588	Petromyzon marinus	29.49	6.00e-31	127.00
IUUC-Sha-106891	Sarcophilus harrisii	32.41	7.00e-52	198.00
IUUC-Ssc-115561	Sus scrofa	32.01	5.00e-54	205.00
IUUC-Tgu-117011	Taeniopygia guttata	31.81	8.00e-58	218.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence