iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099660

Ensembl Protein ID

POPTR_0015s05800.1

UniProt Accession

U5FM53; U5FM53_POPTR

Genbank Protein ID

ERP52095.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_680586; POPTR_0015s05800g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s05800	POPTR_0015s05800.1	POPTR_0015s05800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-19	69.2	341	372

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gHt+ ++ ++f  s++ ++s+s Dgt+++W +
   Q: 341  GHTSAISRCRFsaSGNNIASASVDGTVRIWTY 372
           8***********87799*************75 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MENMQYAEEL VREFLVFRGF TNTLQALDNE LSTDIGKGFH VDKLLDLIFA IYIPRFQVDK 60
LVGLLNFFKH CFSNLSENVL VDTLLKLEGY ILRYYIVYAI QSGRKDMVLE FFGINGNELV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTAGCAACG GACTATTACA AGAAAGAAAG GATAATAATA ATAATAATAA TAGCGCCGAA 60
GCTCCATTTT ACCAAACAAA TCTCTCTTTG GATCTCCTCT GCGAGTTCTC CAAGGTACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0015s05800g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000967	Aegilops tauschii	52.04	2.00e-176	611.00
IUUC-Aml-002391	Ailuropoda melanoleuca	30.06	2.00e-42	166.00
IUUC-Atr-002487	Amborella trichopoda	62.31	0.00e+00	818.00
IUUC-Apl-003180	Anas platyrhynchos	30.06	6.00e-43	168.00
IUUC-Aca-004864	Anolis carolinensis	30.00	2.00e-43	170.00
IUUC-Ame-011815	Astyanax mexicanus	28.98	4.00e-75	275.00
IUUC-Bta-012663	Bos taurus	29.43	3.00e-42	166.00
IUUC-Bdi-014897	Brachypodium distachyon	75.69	9.00e-83	298.00
IUUC-Cja-019999	Callithrix jacchus	30.64	4.00e-43	169.00
IUUC-Cfa-020220	Canis familiaris	30.06	1.00e-41	164.00
IUUC-Cpo-021382	Cavia porcellus	30.00	5.00e-43	169.00
IUUC-Csa-024167	Chlorocebus sabaeus	30.64	1.00e-42	167.00
IUUC-Cho-024992	Choloepus hoffmanni	28.36	4.00e-27	115.00
IUUC-Cin-025476	Ciona intestinalis	26.90	5.00e-27	115.00
IUUC-Csv-026327	Ciona savignyi	26.00	1.00e-22	100.00
IUUC-Dre-028313	Danio rerio	28.12	4.00e-75	275.00
IUUC-Dno-029310	Dasypus novemcinctus	36.49	3.00e-34	139.00
IUUC-Dor-030829	Dipodomys ordii	35.29	1.00e-32	134.00
IUUC-Eca-033365	Equus caballus	29.14	3.00e-41	162.00
IUUC-Eeu-035105	Erinaceus europaeus	25.72	3.00e-29	123.00
IUUC-Fca-036235	Felis catus	29.77	1.00e-41	164.00
IUUC-Fal-037261	Ficedula albicollis	30.17	5.00e-42	165.00
IUUC-Gmo-038615	Gadus morhua	30.57	1.00e-39	157.00
IUUC-Gga-040964	Gallus gallus	30.35	6.00e-44	172.00
IUUC-Gac-042279	Gasterosteus aculeatus	32.67	7.00e-45	175.00
IUUC-Gma-044040	Glycine max	65.45	0.00e+00	854.00
IUUC-Ggo-045182	Gorilla gorilla	30.64	1.00e-42	167.00
IUUC-Hsa-046466	Homo sapiens	30.64	7.00e-43	168.00
IUUC-Hvu-047423	Hordeum vulgare	55.68	3.00e-128	451.00
IUUC-Itr-048100	Ictidomys tridecemlineatus	30.06	2.00e-42	167.00
IUUC-Lpe-051583	Leersia perrieri	60.18	0.00e+00	659.00
IUUC-Loc-051750	Lepisosteus oculatus	31.18	7.00e-43	168.00
IUUC-Laf-054030	Loxodonta africana	30.90	1.00e-41	164.00
IUUC-Mcc-055794	Macaca mulatta	30.64	1.00e-42	167.00
IUUC-Meu-056775	Macropus eugenii	25.75	5.00e-23	102.00
IUUC-Mtr-058260	Medicago truncatula	66.95	3.00e-172	597.00
IUUC-Mga-060166	Meleagris gallopavo	30.64	1.00e-43	170.00
IUUC-Mmr-061054	Microcebus murinus	29.97	3.00e-42	166.00
IUUC-Mdo-061860	Monodelphis domestica	30.06	4.00e-41	162.00
IUUC-Mmu-063660	Mus musculus	30.64	2.00e-41	163.00
IUUC-Mac-065193	Musa acuminata	66.22	0.00e+00	879.00
IUUC-Mpu-066746	Mustela putorius furo	29.43	1.00e-41	164.00
IUUC-Mlu-068156	Myotis lucifugus	29.43	2.00e-42	167.00
IUUC-Nle-069065	Nomascus leucogenys	30.64	6.00e-43	168.00
IUUC-Opr-070438	Ochotona princeps	31.30	1.00e-44	174.00
IUUC-Ont-072085	Oreochromis niloticus	33.52	2.00e-47	183.00
IUUC-Oan-073049	Ornithorhynchus anatinus	34.07	5.00e-19	89.40
IUUC-Ocu-074114	Oryctolagus cuniculus	30.14	1.00e-42	167.00
IUUC-Oba-075720	Oryza barthii	52.45	3.00e-178	617.00
IUUC-Obr-076720	Oryza brachyantha	76.67	2.00e-151	528.00
IUUC-Ogl-077157	Oryza glaberrima	74.03	1.00e-81	294.00
IUUC-Ogu-079035	Oryza glumaepatula	57.19	0.00e+00	706.00
IUUC-Oin-079408	Oryza indica	57.80	0.00e+00	723.00
IUUC-Olo-080955	Oryza longistaminata	52.22	6.00e-180	624.00
IUUC-Ome-081897	Oryza meridionalis	53.52	0.00e+00	630.00
IUUC-Oni-082460	Oryza nivara	52.45	4.00e-178	617.00
IUUC-Opu-083172	Oryza punctata	57.77	0.00e+00	706.00
IUUC-Oru-085200	Oryza rufipogon	51.25	1.00e-167	582.00
IUUC-Ola-086613	Oryzias latipes	32.46	2.00e-39	156.00
IUUC-Oga-088368	Otolemur garnettii	30.64	3.00e-42	166.00
IUUC-Oar-089425	Ovis aries	26.68	6.00e-62	231.00
IUUC-Ptr-091643	Pan troglodytes	30.64	9.00e-43	167.00
IUUC-Pan-092395	Papio anubis	30.64	1.00e-42	167.00
IUUC-Psi-093924	Pelodiscus sinensis	29.83	1.00e-43	171.00
IUUC-Pma-094283	Petromyzon marinus	33.24	4.00e-39	155.00
IUUC-Pfo-097225	Poecilia formosa	28.40	2.00e-75	276.00
IUUC-Pab-097993	Pongo abelii	30.64	8.00e-43	168.00
IUUC-Pca-100904	Procavia capensis	29.77	1.00e-42	167.00
IUUC-Ppe-101828	Prunus persica	70.36	0.00e+00	761.00
IUUC-Pva-102708	Pteropus vampyrus	35.64	3.00e-33	136.00
IUUC-Rno-105110	Rattus norvegicus	30.64	1.00e-41	164.00
IUUC-Sha-107527	Sarcophilus harrisii	28.36	3.00e-42	166.00
IUUC-Smo-108782	Selaginella moellendorffii	50.00	2.00e-83	302.00
IUUC-Sit-109793	Setaria italica	75.69	3.00e-83	300.00
IUUC-Sly-111878	Solanum lycopersicum	66.45	4.00e-175	607.00
IUUC-Sbi-113923	Sorghum bicolor	76.24	9.00e-84	301.00
IUUC-Ssc-115303	Sus scrofa	29.43	5.00e-42	165.00
IUUC-Tgu-117221	Taeniopygia guttata	28.67	7.00e-29	121.00
IUUC-Tru-117613	Takifugu rubripes	29.01	3.00e-74	272.00
IUUC-Tsy-119336	Tarsius syrichta	28.26	3.00e-27	116.00
IUUC-Tni-120800	Tetraodon nigroviridis	32.86	2.00e-45	177.00
IUUC-Tca-121607	Theobroma cacao	74.70	0.00e+00	947.00
IUUC-Tae-125541	Triticum aestivum	62.20	0.00e+00	803.00
IUUC-Tur-126358	Triticum urartu	50.16	7.00e-151	526.00
IUUC-Tbe-128121	Tupaia belangeri	30.00	8.00e-43	168.00
IUUC-Ttr-128704	Tursiops truncatus	29.14	2.00e-42	166.00
IUUC-Vvi-131495	Vitis vinifera	72.52	0.00e+00	899.00
IUUC-Xtr-132097	Xenopus tropicalis	29.48	4.00e-40	159.00
IUUC-Xma-134237	Xiphophorus maculatus	31.55	2.00e-46	179.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence