iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d027514	Zm00001d027514_T004	Zm00001d027514_T004
Zm00001d027514	Zm00001d027514_T001	Zm00001d027514_T001
Zm00001d027514	Zm00001d027514_T003	Zm00001d027514_T003
Zm00001d027514	Zm00001d027514_T002	Zm00001d027514_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.70e-07	32.5	497	531
ULD/UDP/UBQ/UBQ_PIM	8.40e-21	75.7	18	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 6    kleqlveMGF.dreealqaLraannnleaAveyLl 39
           +l+ql+eMGF d++e+++aL+a+ +n+ aAve+Ll
   Q: 497  QLAQLQEMGFfDTQENIRALAATAGNVHAAVERLL 531
           89*******99***********************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 2    kltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           +l++++++g++f ++++   tv  +K+ +a++++vp+ qq+LIy+G+iLkD++tL ++g+++++++h+v   
   Q: 18   TLHIRCTNGSKFAVRADLGATVGTFKAIVADSCDVPAPQQRLIYKGRILKDEQTLASYGVETDHTIHMVRGA 89
           699*****************************************************************9765 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MGGGDADAGG EPAAAQATLH IRCTNGSKFA VRADLGATVG TFKAIVADSC DVPAPQQRLI 60
YKGRILKDEQ TLASYGVETD HTIHMVRGAA PPPASTAPAA NQEPTTAAPA SSPAAGLGGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCCACAGCG CACGCACTCC AAATAGCGAG CCAAAGGCGG GCCGAGGCCA CGAGTCCTCC 60
GCCTCTCCTC CGCCGCGTCG CTCGCGCTCC AGGCACGCCG AAAGCCGAAT CGGGGCCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000864	Aegilops tauschii	70.65	4.00e-95	341.00
IUUC-Aml-001461	Ailuropoda melanoleuca	36.79	7.00e-45	174.00
IUUC-Apl-003241	Anas platyrhynchos	38.01	2.00e-44	173.00
IUUC-Aca-004511	Anolis carolinensis	34.57	8.00e-50	191.00
IUUC-Ame-011329	Astyanax mexicanus	38.41	5.00e-48	185.00
IUUC-Bta-013048	Bos taurus	36.79	8.00e-45	174.00
IUUC-Cja-019976	Callithrix jacchus	36.79	1.00e-43	171.00
IUUC-Cfa-020092	Canis familiaris	37.11	1.00e-44	174.00
IUUC-Cpo-022388	Cavia porcellus	36.79	5.00e-44	172.00
IUUC-Cho-024834	Choloepus hoffmanni	37.11	2.00e-44	173.00
IUUC-Dre-028009	Danio rerio	36.60	8.00e-44	171.00
IUUC-Dor-030519	Dipodomys ordii	36.48	1.00e-40	160.00
IUUC-Fca-036179	Felis catus	36.79	8.00e-45	174.00
IUUC-Fal-037642	Ficedula albicollis	33.86	4.00e-51	195.00
IUUC-Gga-041264	Gallus gallus	38.01	3.00e-45	175.00
IUUC-Gac-041826	Gasterosteus aculeatus	37.25	4.00e-44	172.00
IUUC-Ggo-044969	Gorilla gorilla	36.16	1.00e-40	160.00
IUUC-Hsa-046669	Homo sapiens	36.79	7.00e-44	171.00
IUUC-Itr-048337	Ictidomys tridecemlineatus	37.11	3.00e-43	169.00
IUUC-Lpe-051401	Leersia perrieri	75.00	4.00e-171	593.00
IUUC-Mcc-055680	Macaca mulatta	36.79	7.00e-44	171.00
IUUC-Mvi-060466	Microbotryum violaceum	63.83	2.00e-12	66.20
IUUC-Mpu-066282	Mustela putorius furo	37.11	8.00e-45	174.00
IUUC-Mlu-068158	Myotis lucifugus	36.91	2.00e-44	173.00
IUUC-Nle-069321	Nomascus leucogenys	36.79	7.00e-44	171.00
IUUC-Opr-071098	Ochotona princeps	36.94	7.00e-45	174.00
IUUC-Ont-072038	Oreochromis niloticus	36.93	3.00e-42	166.00
IUUC-Oba-074973	Oryza barthii	83.16	2.00e-153	535.00
IUUC-Oin-079142	Oryza indica	76.97	0.00e+00	629.00
IUUC-Olo-080565	Oryza longistaminata	73.85	1.00e-173	602.00
IUUC-Oni-082272	Oryza nivara	76.97	0.00e+00	629.00
IUUC-Opu-083241	Oryza punctata	74.21	0.00e+00	659.00
IUUC-Oru-085257	Oryza rufipogon	76.97	0.00e+00	629.00
IUUC-Ptr-091439	Pan troglodytes	36.48	3.00e-42	166.00
IUUC-Pan-092641	Papio anubis	36.79	7.00e-44	171.00
IUUC-Psi-093518	Pelodiscus sinensis	33.48	1.00e-46	180.00
IUUC-Pma-094727	Petromyzon marinus	42.31	4.00e-16	79.00
IUUC-Pop-099077	Populus trichocarpa	64.99	6.00e-125	440.00
IUUC-Sit-110766	Setaria italica	87.09	0.00e+00	665.00
IUUC-Sbi-114307	Sorghum bicolor	96.53	0.00e+00	751.00
IUUC-Ssc-115820	Sus scrofa	36.79	1.00e-44	174.00
IUUC-Tbe-127379	Tupaia belangeri	34.06	4.00e-41	161.00
IUUC-Ttr-128630	Tursiops truncatus	36.79	7.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence