iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001273

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

ACTA01154065

Gene Name

PAN2; PANDA_004089

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000003824.1	ENSAMET00000004242.1	ENSAMEP00000004077.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.70e-20	72.1	525	911

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 9    tCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefs............ 85
             Y+N+++Q+L++++++r+l+ +   + +++      + +l+++l  lf+ l  s+    + +++l+a++++ e               
   Q: 525  NAYCNCMIQVLYFLEPVRCLIQN---HLCQK------EFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASAlgliladsdeas 604
           56*********************...55654......57*************9****************99999866777777777666 PP
   S: 86   ..gyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldl 172
             g+     q   +f+l ql++++++        +e    ++      ++  ++++s+i +lF  ++++   c +c+++++r ++ l +
   Q: 605  gkGNLARLIQRWNRFILTQLHQDMQE--------LEAP--QAYRGAGGSSFCSSGDSVIGQLFSCEMENCSLC-RCGSETVRASSTLLF 682
           66666667777888888888888833........2222..23344567899*****************99999.8************** PP
   S: 173  slpvpgkeetkkeslqdcLesftkeee.legenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLd 260
           +l+ p+ ++++k+  +  +++  k+   le++ + +c++c+k+q + ++  +++lP++L+++    s +e+   r  ++ +v f+  + 
   Q: 683  TLSYPEGSTSDKTGKSCDFAQVLKRSIcLEQNTQAWCDNCEKYQPTIQTRNIRHLPDILVINCEVNSLKEADFWR--MQAEVAFK--MA 767
           *****88876666333334555554432666667********************************988887765..78888887..45 PP
   S: 261  lspfcts.................peekqke.....................................................kkkYe 279
           ++++  +                 p     e                                                      + Y+
   Q: 768  IKKHGGEisknkefaladwkelgsP-----EgmlmcssieelknvwlpfsirmkitknkgldvcnwtdgdeiqwgparaeeehgVYVYD 851
           5555555223344455555555550.....0555555555555555555555555555555566666666666666666666669**** PP
   S: 280  LiavvvHsG.slssGHYvayvkn...........ekgkWllfdDskVtevkeeevleetg 327
           L+a vvH   s  +G  va++k            ++++W+lf+D  +++++++e +++  
   Q: 852  LMATVVHILdSRTGGSLVAHIKVgetyhqrkegvTHQQWYLFNDFLIEPIDKHEAVQFDM 911
           *********9*************999988877777888************9999888654 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MNFEGLDPGL AEYAPAMHSA LDPVLDAHLN PSLLQNVDLD PEGVALEALP VQESVHIMEG 60
VYSELHSVVA EVGVPVSVSH FDLHEEMLWV GSHGGHATSF FGPALERYSS FQVNGSDDIR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTTCG AGGGTCTGGA CCCTGGACTG GCAGAGTATG CCCCAGCCAT GCATTCTGCC 60
CTGGACCCTG TCCTGGACGC CCACCTGAAC CCAAGTCTGC TACAGAATGT GGATCTGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013520--Exonuclease_RNaseT/DNA_pol3
IPR030843--PAN2
IPR028881--PAN2_dom
IPR012337--RNaseH-like_dom
IPR028889--USP_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

PROSITE

PS50235--USP_3

Pfam

PF00929--RNase_T
PF13423--UCH_1

SMART

SM00479--EXOIII

Gene Ontology

GO:0000932--C:P-body
GO:0031251--C:PAN complex
GO:0003676--F:nucleic acid binding
GO:0004535--F:poly(A)-specific ribonuclease activity
GO:0006397--P:mRNA processing
GO:0000289--P:nuclear-transcribed mRNA poly(A) tail shortening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003500	Anas platyrhynchos	85.70	0.00e+00	1884.00
IUUC-Aca-004930	Anolis carolinensis	84.12	0.00e+00	2018.00
IUUC-Acl-008214	Aspergillus clavatus	31.25	1.00e-157	550.00
IUUC-Afu-009112	Aspergillus fumigatus	31.26	8.00e-148	518.00
IUUC-Ang-009531	Aspergillus niger	31.01	1.00e-149	524.00
IUUC-Ame-011259	Astyanax mexicanus	76.69	0.00e+00	1847.00
IUUC-Bta-012371	Bos taurus	98.34	0.00e+00	2355.00
IUUC-Bci-013684	Botrytis cinerea	31.13	1.00e-134	474.00
IUUC-Cja-019297	Callithrix jacchus	95.19	0.00e+00	2288.00
IUUC-Cfa-020489	Canis familiaris	98.42	0.00e+00	2346.00
IUUC-Cpo-022392	Cavia porcellus	96.76	0.00e+00	2342.00
IUUC-Csa-023220	Chlorocebus sabaeus	97.92	0.00e+00	2353.00
IUUC-Csv-025841	Ciona savignyi	45.88	0.00e+00	902.00
IUUC-Cgl-026534	Colletotrichum gloeosporioides	32.56	1.00e-163	570.00
IUUC-Cne-026932	Cryptococcus neoformans	42.94	4.00e-73	270.00
IUUC-Dre-028482	Danio rerio	74.75	0.00e+00	1795.00
IUUC-Dno-029398	Dasypus novemcinctus	97.09	0.00e+00	2311.00
IUUC-Dor-030307	Dipodomys ordii	90.55	0.00e+00	1317.00
IUUC-Dme-032111	Drosophila melanogaster	41.52	0.00e+00	880.00
IUUC-Eca-033985	Equus caballus	98.75	0.00e+00	2360.00
IUUC-Eeu-034928	Erinaceus europaeus	84.82	0.00e+00	779.00
IUUC-Fca-035587	Felis catus	99.00	0.00e+00	2376.00
IUUC-Fal-037587	Ficedula albicollis	84.40	0.00e+00	1981.00
IUUC-Fso-038133	Fusarium solani	29.49	5.00e-132	465.00
IUUC-Gmo-039076	Gadus morhua	74.14	0.00e+00	1753.00
IUUC-Ggr-039957	Gaeumannomyces graminis	32.46	5.00e-143	502.00
IUUC-Gga-040948	Gallus gallus	85.54	0.00e+00	2063.00
IUUC-Gac-042396	Gasterosteus aculeatus	74.73	0.00e+00	1803.00
IUUC-Ggo-045412	Gorilla gorilla	98.17	0.00e+00	2353.00
IUUC-Hsa-046076	Homo sapiens	98.17	0.00e+00	2357.00
IUUC-Itr-048143	Ictidomys tridecemlineatus	90.42	0.00e+00	2106.00
IUUC-Kpa-049178	Komagataella pastoris	40.48	6.00e-67	249.00
IUUC-Lch-050279	Latimeria chalumnae	72.34	0.00e+00	1710.00
IUUC-Loc-052872	Lepisosteus oculatus	76.95	0.00e+00	1845.00
IUUC-Lma-052986	Leptosphaeria maculans	32.41	5.00e-159	555.00
IUUC-Laf-054181	Loxodonta africana	95.53	0.00e+00	2296.00
IUUC-Mcc-054812	Macaca mulatta	97.84	0.00e+00	2342.00
IUUC-Meu-056325	Macropus eugenii	92.51	0.00e+00	2221.00
IUUC-Mor-057246	Magnaporthe oryzae	29.43	2.00e-125	443.00
IUUC-Mpo-057464	Magnaporthe poae	32.04	2.00e-145	510.00
IUUC-Mla-058911	Melampsora laricipopulina	32.46	4.00e-99	356.00
IUUC-Mga-059335	Meleagris gallopavo	85.89	0.00e+00	2013.00
IUUC-Mvi-060461	Microbotryum violaceum	34.25	6.00e-146	511.00
IUUC-Mmr-060636	Microcebus murinus	97.84	0.00e+00	2339.00
IUUC-Mmu-063503	Mus musculus	95.37	0.00e+00	2269.00
IUUC-Mpu-066670	Mustela putorius furo	99.25	0.00e+00	2368.00
IUUC-Mlu-068119	Myotis lucifugus	97.42	0.00e+00	2369.00
IUUC-Nfi-068398	Neosartorya fischeri	31.93	2.00e-157	550.00
IUUC-Ncr-068927	Neurospora crassa	30.09	5.00e-131	462.00
IUUC-Nle-069651	Nomascus leucogenys	93.93	0.00e+00	2251.00
IUUC-Opr-070614	Ochotona princeps	96.60	0.00e+00	2290.00
IUUC-Ont-072433	Oreochromis niloticus	75.14	0.00e+00	1860.00
IUUC-Oan-073283	Ornithorhynchus anatinus	74.03	0.00e+00	1425.00
IUUC-Ocu-074401	Oryctolagus cuniculus	96.45	0.00e+00	2312.00
IUUC-Ola-087522	Oryzias latipes	74.88	0.00e+00	1805.00
IUUC-Oga-088226	Otolemur garnettii	96.45	0.00e+00	2321.00
IUUC-Oar-089241	Ovis aries	98.50	0.00e+00	2388.00
IUUC-Pan-092297	Papio anubis	97.84	0.00e+00	2095.00
IUUC-Psi-094043	Pelodiscus sinensis	82.32	0.00e+00	1925.00
IUUC-Pma-094394	Petromyzon marinus	69.34	0.00e+00	1563.00
IUUC-Pno-095053	Phaeosphaeria nodorum	31.89	1.00e-149	523.00
IUUC-Ppa-095188	Physcomitrella patens	32.49	2.00e-157	550.00
IUUC-Pfo-097517	Poecilia formosa	75.86	0.00e+00	1863.00
IUUC-Pca-100471	Procavia capensis	97.74	0.00e+00	2202.00
IUUC-Pva-102805	Pteropus vampyrus	94.42	0.00e+00	1866.00
IUUC-Pte-104021	Pyrenophora teres	32.06	1.00e-161	564.00
IUUC-Pyt-104682	Pyrenophora triticirepentis	31.88	1.00e-160	560.00
IUUC-Rno-105471	Rattus norvegicus	95.51	0.00e+00	2271.00
IUUC-Sce-106235	Saccharomyces cerevisiae	35.92	3.00e-61	230.00
IUUC-Sha-106883	Sarcophilus harrisii	91.67	0.00e+00	2049.00
IUUC-Spo-108169	Schizosaccharomyces pombe	32.02	1.00e-141	497.00
IUUC-Sar-113323	Sorex araneus	96.20	0.00e+00	1728.00
IUUC-Sre-115075	Sporisorium reilianum	29.44	5.00e-69	256.00
IUUC-Ssc-116363	Sus scrofa	97.52	0.00e+00	2363.00
IUUC-Tru-118427	Takifugu rubripes	75.08	0.00e+00	1876.00
IUUC-Tni-120218	Tetraodon nigroviridis	75.43	0.00e+00	1869.00
IUUC-Tre-122177	Trichoderma reesei	32.15	7.00e-153	535.00
IUUC-Tme-127176	Tuber melanosporum	32.66	2.00e-139	490.00
IUUC-Tbe-127641	Tupaia belangeri	88.24	0.00e+00	806.00
IUUC-Ttr-128888	Tursiops truncatus	97.86	0.00e+00	1501.00
IUUC-Uma-129361	Ustilago maydis	38.42	2.00e-63	238.00
IUUC-Xtr-132811	Xenopus tropicalis	79.09	0.00e+00	1896.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence