iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126506

Ensembl Protein ID

TRIUR3_10748-P1

UniProt Accession

M7YVB7; M7YVB7_TRIUA

Genbank Protein ID

EMS51051.1

Protein Name

Transcription elongation factor B polypeptide 3

Genbank Nucleotide ID

KD224518

Gene Name

TRIUR3_10748

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_10748	TRIUR3_10748-T1	TRIUR3_10748-P1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	37.31	1.40e-02	34.70	IUUC-Sce-106376
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	37.31	1.40e-02	34.70	IUUC-Sce-106376

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Triticum urartu

Protein Sequence
(Fasta)

MEPGRKPLSL LDLCIRSAVD NLRTLNSVDI VPDELLKRIL PHCTLEQLRH IESCTHADLT 60
DVTDVLWKRF FQREFGEENM NLAIKRMKEN GVRYKWKKLF EARTEKQKQV EARMSAGLKN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCCTG GAAGGAAACC TCTGAGTCTG CTGGACCTAT GCATCCGGAG CGCCGTTGAC 60
AACCTCAGGA CCCTCAACAG CGTCGACATC GTGCCTGACG AGCTGCTCAA GAGAATCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0251--Elongation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR010684--RNA_pol_II_trans_fac_SIII_A

Pfam

PF06881--Elongin_A

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus
GO:0003746--F:translation elongation factor activity
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001705	Ailuropoda melanoleuca	31.09	1.00e-06	48.10
IUUC-Apl-003659	Anas platyrhynchos	38.36	6.00e-07	48.50
IUUC-Aca-004513	Anolis carolinensis	38.67	4.00e-07	49.30
IUUC-Ago-007835	Ashbya gossypii	25.84	3.50e-02	31.60
IUUC-Acl-008085	Aspergillus clavatus	35.21	2.00e-03	35.80
IUUC-Afu-008931	Aspergillus fumigatus	34.29	2.00e-03	35.80
IUUC-Ang-009875	Aspergillus niger	31.43	2.40e-02	32.30
IUUC-Ame-011668	Astyanax mexicanus	36.11	5.00e-07	48.50
IUUC-Bta-013219	Bos taurus	27.97	5.00e-04	39.30
IUUC-Bdi-014527	Brachypodium distachyon	50.25	6.00e-45	172.00
IUUC-Bol-016438	Brassica oleracea	35.71	4.00e-27	114.00
IUUC-Bra-017526	Brassica rapa	35.98	3.00e-26	111.00
IUUC-Cel-018281	Caenorhabditis elegans	26.21	6.00e-05	41.20
IUUC-Cja-018759	Callithrix jacchus	30.25	2.00e-05	43.50
IUUC-Cfa-020766	Canis familiaris	29.91	1.00e-05	44.70
IUUC-Cpo-022250	Cavia porcellus	31.62	7.00e-07	48.50
IUUC-Csa-023293	Chlorocebus sabaeus	30.25	4.00e-06	45.80
IUUC-Cgl-026733	Colletotrichum gloeosporioides	32.69	3.00e-03	35.40
IUUC-Dre-027828	Danio rerio	33.98	1.00e-08	53.50
IUUC-Dme-031809	Drosophila melanogaster	38.46	2.00e-05	43.50
IUUC-Ete-032677	Echinops telfairi	31.62	3.00e-08	53.10
IUUC-Eca-034045	Equus caballus	36.84	1.00e-05	43.50
IUUC-Eeu-035063	Erinaceus europaeus	38.24	4.00e-06	45.80
IUUC-Fca-036488	Felis catus	31.09	9.00e-08	51.60
IUUC-Fal-037501	Ficedula albicollis	31.03	2.00e-07	50.10
IUUC-Fox-038013	Fusarium oxysporum	27.59	1.00e-02	33.50
IUUC-Fso-038123	Fusarium solani	27.35	4.00e-03	34.70
IUUC-Gmo-038614	Gadus morhua	38.24	2.00e-07	50.10
IUUC-Gga-040738	Gallus gallus	30.17	1.00e-06	48.10
IUUC-Gac-041381	Gasterosteus aculeatus	31.94	3.00e-05	42.70
IUUC-Gma-042964	Glycine max	41.67	1.00e-25	108.00
IUUC-Ggo-045139	Gorilla gorilla	30.25	4.00e-06	45.80
IUUC-Hsa-046083	Homo sapiens	30.25	4.00e-06	45.80
IUUC-Itr-048970	Ictidomys tridecemlineatus	36.76	8.00e-06	45.10
IUUC-Kpa-049376	Komagataella pastoris	24.24	4.00e-04	37.70
IUUC-Lch-050369	Latimeria chalumnae	34.95	2.00e-07	50.40
IUUC-Lpe-050727	Leersia perrieri	59.88	3.00e-51	194.00
IUUC-Loc-052347	Lepisosteus oculatus	38.89	7.00e-09	54.70
IUUC-Laf-053575	Loxodonta africana	30.77	3.00e-06	46.20
IUUC-Mcc-054823	Macaca mulatta	30.25	4.00e-06	45.80
IUUC-Meu-056878	Macropus eugenii	35.21	2.00e-04	40.00
IUUC-Mtr-057811	Medicago truncatula	43.33	3.00e-26	110.00
IUUC-Mga-059445	Meleagris gallopavo	30.17	9.00e-07	48.10
IUUC-Mmr-060665	Microcebus murinus	29.91	8.00e-06	45.10
IUUC-Mdo-062430	Monodelphis domestica	44.00	7.00e-09	55.10
IUUC-Mmu-064173	Mus musculus	38.24	6.00e-07	48.90
IUUC-Mac-065364	Musa acuminata	45.31	5.00e-30	123.00
IUUC-Mpu-066344	Mustela putorius furo	29.91	5.00e-06	45.80
IUUC-Mlu-068101	Myotis lucifugus	29.41	6.00e-06	45.40
IUUC-Nfi-068489	Neosartorya fischeri	31.43	1.80e-02	32.70
IUUC-Opr-070498	Ochotona princeps	29.13	7.00e-03	34.70
IUUC-Ont-071579	Oreochromis niloticus	34.72	1.00e-06	47.40
IUUC-Oan-072862	Ornithorhynchus anatinus	31.09	1.00e-08	54.30
IUUC-Ocu-073882	Oryctolagus cuniculus	29.91	4.00e-06	45.80
IUUC-Oba-075710	Oryza barthii	60.34	1.00e-53	201.00
IUUC-Ogl-077171	Oryza glaberrima	53.85	2.00e-46	177.00
IUUC-Ogu-078827	Oryza glumaepatula	53.33	9.00e-46	176.00
IUUC-Oin-080204	Oryza indica	60.34	1.00e-53	202.00
IUUC-Olo-081049	Oryza longistaminata	60.34	6.00e-53	200.00
IUUC-Ome-081128	Oryza meridionalis	57.98	3.00e-36	143.00
IUUC-Oni-083077	Oryza nivara	60.34	2.00e-53	201.00
IUUC-Opu-083270	Oryza punctata	49.14	7.00e-52	196.00
IUUC-Oru-084299	Oryza rufipogon	57.98	3.00e-36	143.00
IUUC-Osa-085671	Oryza sativa	58.65	6.00e-32	127.00
IUUC-Ola-086456	Oryzias latipes	38.89	5.00e-08	52.40
IUUC-Oga-087918	Otolemur garnettii	29.91	7.00e-06	45.10
IUUC-Oar-089663	Ovis aries	30.77	4.00e-07	49.30
IUUC-Ptr-091033	Pan troglodytes	36.76	1.00e-05	44.30
IUUC-Pan-092277	Papio anubis	30.25	4.00e-06	45.80
IUUC-Psi-094086	Pelodiscus sinensis	38.03	3.00e-07	49.70
IUUC-Pma-094683	Petromyzon marinus	33.80	5.00e-06	44.30
IUUC-Pfo-097334	Poecilia formosa	36.11	6.00e-07	48.50
IUUC-Pab-098345	Pongo abelii	30.25	4.00e-06	46.20
IUUC-Pop-099683	Populus trichocarpa	42.28	5.00e-26	108.00
IUUC-Pca-100737	Procavia capensis	31.62	7.00e-07	48.50
IUUC-Pva-102497	Pteropus vampyrus	30.77	3.00e-06	46.60
IUUC-Pgr-103464	Puccinia graminis	29.58	1.00e-03	34.70
IUUC-Rno-105177	Rattus norvegicus	38.24	6.00e-07	48.90
IUUC-Sce-106376	Saccharomyces cerevisiae	37.31	5.00e-03	34.70
IUUC-Sha-106480	Sarcophilus harrisii	44.00	5.00e-09	55.80
IUUC-Sja-107782	Schizosaccharomyces japonicus	25.81	4.10e-02	30.80
IUUC-Sit-109960	Setaria italica	52.63	6.00e-49	186.00
IUUC-Sar-113255	Sorex araneus	29.91	9.00e-06	44.70
IUUC-Sbi-114855	Sorghum bicolor	48.89	8.00e-37	145.00
IUUC-Sre-115076	Sporisorium reilianum	26.89	1.00e-04	40.40
IUUC-Ssc-115875	Sus scrofa	31.09	1.00e-07	50.80
IUUC-Tgu-117066	Taeniopygia guttata	31.03	3.00e-07	49.70
IUUC-Tru-117881	Takifugu rubripes	38.03	2.00e-07	49.70
IUUC-Tsy-119531	Tarsius syrichta	30.25	3.00e-06	46.20
IUUC-Tni-120325	Tetraodon nigroviridis	38.03	4.00e-07	49.30
IUUC-Tae-122727	Triticum aestivum	80.31	3.00e-76	277.00
IUUC-Tbe-127648	Tupaia belangeri	30.25	2.00e-06	47.00
IUUC-Ttr-129287	Tursiops truncatus	31.62	2.00e-07	50.40
IUUC-Uma-129543	Ustilago maydis	29.85	6.00e-04	38.50
IUUC-Vpa-130645	Vicugna pacos	30.77	5.00e-07	48.90
IUUC-Xtr-132709	Xenopus tropicalis	39.71	4.00e-08	52.80
IUUC-Xma-133858	Xiphophorus maculatus	36.11	6.00e-07	48.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence